G43896 (helz2)


Basic Information

Item Value
gene id G43896
gene name helz2
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 35591037 ~ 35593586 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU58896
GACAAGCTTCAACATTCTGTACTGACTACATGTTTATACAGGTAATACTTTGAGAGGAGCAATTCTTCACAATGAGTAGTTTTACtctggaatatattttttatagtgGTGTAGCTTCTTTACTTTCAGTAAAAGAGTTGTTGTTAGGTAGCAGAGAGGTCACCTTGGCTTCTGGTGATTGTGGTAACGCTGATTTGAGTCATGCCCTTCTTCTTCAGCTCATCTCTGATTTCAGACACTTGTGCATTATAGGGTGACAGAATCACAATATCTTGCTCTTTGATTTTGGCATTCTTCACCAGCTTTTCAGCAATGTCAATCTGCAAAAGACCAAACCAACACTGAGGTTATAAGCAATAATAATGTAAAACGGTACTATTACTTTACTACTCTATAGTAACTTTTAACCAAAACCTAGGGTGCCCAATATAGGTCTGCACGATTCgtggaaaaatatgaatcacaattttttagcttagaatttaTATCATGATTCTCTGCCTCGATTTCTTTCTcacaaagtgtaatgtttattgcacacatgaaccatgacaaaacaaaacaaattggcagtaccaaacatagatttgttttggcacctatagcgcattgcgcatcaccacaagcctgtaaacatagaggcttcaatggataacaaaaataaagaacatactggccatttaagtacagtaggctacgaaaaatagtgacatttaacacatttaactaaatatggccctgatacaggctctatctgaaccccttgaacatgtctttacataattaaaacatgttaatgtcaatgtcaaatgctttcaataaattaactgaaggagaattttttttttttttaattacgaacaggggtgaatcgagatTGTGATTTTATAATGATTTATTGTGCAGGCCTAGCCCAATACAGTAccactttgtctctctctttctggttTGCTTTGGAGTTCTCATTGCCCTTGGCTGTGCTGACAACCAGACTGATGGTCTCTCCTTTGATGTCCCCAAAAACGATTGGCATCGTCTTGGCATCAACACGCAGGACGCTGCTTGGCTGATTCTCCCCAGTTCTCAGCAATCCCTCATAGTATTCTTCTGACGGGAACTTGCATATGTCCTCATGCATTCTGTACTGGGTGTCCAGCATCACTGCCCTGCTCTTATGCATTGTATAGTAGCGTTCAAACAGGGACTTGGCCATCCCCAGCTTCCTCACACGCTCATTCTTCACAATGGGTCGTAACTGTTTGTGGTCACCGATCAAAACAACCTTTCTGGTTTGTTGCAGACTAATGGAATCAGGGCCTGGGGTTCAGTGGCCATTCCACATTCATCAATGAGGATCTGACGTGCGCTGACTGTCTTAGTCAAACTCGGGGTGGAAGACTGTGTACATGTGCACAGTATGATGTCATGGCGTTCAAGCTCATATGTCCGCGCAACGCTGAGAAGGTTTTTGTATCTAGATGGGAACATTTTTCATACAGTTAGGGCTGGATATACAGTCTTAAAGTTATTTACTTACTCTTTTCTACTCTTTCTAACTCTTTGGACAGGAGTTTGGTGTGCAAACAGATGacagacatgcaggaaactAAAATTAAACTAACAAACACAAGACATTAAAGTTGGAC

Function

symbol description
helz2 Enables nuclear receptor coactivator activity. Involved in positive regulation of transcription by RNA polymerase II. Located in membrane.

NR:

description
PREDICTED: helicase with zinc finger domain 2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58896 True 1646 lncRNA 0.40 3 35591037 35593586

Neighbor

gene id symbol gene type direction distance location
LOC120556919 NA coding upstream 71089 35517738 ~ 35519948 (+)
tp53rk tp53rk coding upstream 117711 35470994 ~ 35473326 (+)
LOC120557477 LOC103375199,LOC104930306,LOC101473264,LOC108251201 coding upstream 138718 35426361 ~ 35452319 (+)
LOC120558245 NA coding upstream 150898 35439977 ~ 35440139 (+)
LOC120556789 LOC104930304,LOC100703713,LOC103370810,LOC102215223 coding upstream 271868 35316477 ~ 35319169 (+)
sypl2a LOC103367888 coding downstream 589006 36182592 ~ 36210487 (+)
atxn7l2a atxn7l2,LOC103374593 coding downstream 622499 36216085 ~ 36242866 (+)
LOC120557073 LOC103374592,LOC100706250,LOC102300861,LOC101476702,LOC102207203,LOC102780650 coding downstream 650071 36243657 ~ 36249486 (+)
camk1ga LOC108240302,LOC103373651 coding downstream 708360 36301946 ~ 36327932 (+)
LOC120556721 NA coding downstream 772934 36366520 ~ 36368410 (+)
G43893 NA non-coding upstream 5631 35585201 ~ 35585406 (+)
LOC120556868 NA non-coding upstream 30149 35557651 ~ 35560888 (+)
G43877 NA non-coding upstream 49785 35540475 ~ 35541252 (+)
G43874 NA non-coding upstream 60993 35529833 ~ 35530044 (+)
G43859 NA non-coding upstream 132021 35458707 ~ 35459016 (+)
G43915 NA non-coding downstream 43215 35636801 ~ 35644114 (+)
LOC120556668 NA non-coding downstream 82612 35676198 ~ 35689917 (+)
G43983 NA non-coding downstream 154470 35748056 ~ 35748334 (+)
G43999 LOC107698917 non-coding downstream 290433 35884019 ~ 35884249 (+)
G44001 NA non-coding downstream 298331 35891917 ~ 35892129 (+)
LOC120556915 NA other upstream 104802 35463772 ~ 35486235 (+)
G43656 NA other upstream 923855 34665236 ~ 34667182 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other upstream 2245231 33340284 ~ 33345806 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other upstream 2254270 33262195 ~ 33336767 (+)
G43277 NA other upstream 2378719 33187738 ~ 33212318 (+)
G43924 NA other downstream 70557 35664143 ~ 35666041 (+)
trnac-gca_18 NA other downstream 368953 35962539 ~ 35962610 (+)
fezf2 fezf2 other downstream 1109669 36703255 ~ 36711295 (+)
plekha6 plekha6 other downstream 2367120 37960706 ~ 38096072 (+)
LOC120557027 NA other downstream 2572596 38166182 ~ 38174494 (+)

Expression


Co-expression Network