G43915


Basic Information

Item Value
gene id G43915
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 35636801 ~ 35644114 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU58920
AATGAaatttgttattttgtcacttattcagagcagtaggattactggaaccattcacctgcctgttctgttatgggctgatgccgctggagccgtcagacagctttacagcacgcacggagatgagaaggGcaaataatgaaattaattgTCACAAACACGCCCAGTTGAACATCCAGGCTCTTGGGCTCTCCAGGACATCAGGCTTGTTCGAGATGAGCTGCGCcttgcctgtaaagtggacgagagcagatggcagcagccgggggcggttaCAAAAAGCCGCGATAAAGTCGGTAAACAGTTTACacccgtttccagcagccttcaggctgaacaggaagtcacagaaacactcacatcctgtcAGGTccaattccgatttaataaaatgttatca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58920 True 400 lncRNA 0.48 2 35636801 35644114

Neighbor

gene id symbol gene type direction distance location
LOC120556919 NA coding upstream 116853 35517738 ~ 35519948 (+)
tp53rk tp53rk coding upstream 163475 35470994 ~ 35473326 (+)
LOC120557477 LOC103375199,LOC104930306,LOC101473264,LOC108251201 coding upstream 184482 35426361 ~ 35452319 (+)
LOC120558245 NA coding upstream 196662 35439977 ~ 35440139 (+)
LOC120556789 LOC104930304,LOC100703713,LOC103370810,LOC102215223 coding upstream 317632 35316477 ~ 35319169 (+)
sypl2a LOC103367888 coding downstream 538478 36182592 ~ 36210487 (+)
atxn7l2a atxn7l2,LOC103374593 coding downstream 571971 36216085 ~ 36242866 (+)
LOC120557073 LOC103374592,LOC100706250,LOC102300861,LOC101476702,LOC102207203,LOC102780650 coding downstream 599543 36243657 ~ 36249486 (+)
camk1ga LOC108240302,LOC103373651 coding downstream 657832 36301946 ~ 36327932 (+)
LOC120556721 NA coding downstream 722406 36366520 ~ 36368410 (+)
G43896 helz2 non-coding upstream 43215 35591037 ~ 35593586 (+)
G43893 NA non-coding upstream 51395 35585201 ~ 35585406 (+)
LOC120556868 NA non-coding upstream 75913 35557651 ~ 35560888 (+)
G43877 NA non-coding upstream 95549 35540475 ~ 35541252 (+)
G43874 NA non-coding upstream 106757 35529833 ~ 35530044 (+)
LOC120556668 NA non-coding downstream 32084 35676198 ~ 35689917 (+)
G43983 NA non-coding downstream 103942 35748056 ~ 35748334 (+)
G43999 LOC107698917 non-coding downstream 239905 35884019 ~ 35884249 (+)
G44001 NA non-coding downstream 247803 35891917 ~ 35892129 (+)
G44004 nfasc non-coding downstream 262963 35907077 ~ 35981369 (+)
LOC120556915 NA other upstream 150566 35463772 ~ 35486235 (+)
G43656 NA other upstream 969619 34665236 ~ 34667182 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other upstream 2290995 33340284 ~ 33345806 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other upstream 2300034 33262195 ~ 33336767 (+)
G43277 NA other upstream 2424483 33187738 ~ 33212318 (+)
G43924 NA other downstream 20029 35664143 ~ 35666041 (+)
trnac-gca_18 NA other downstream 318425 35962539 ~ 35962610 (+)
fezf2 fezf2 other downstream 1059141 36703255 ~ 36711295 (+)
plekha6 plekha6 other downstream 2316592 37960706 ~ 38096072 (+)
LOC120557027 NA other downstream 2522068 38166182 ~ 38174494 (+)

Expression


Co-expression Network