fezf2 (fezf2)


Basic Information

Item Value
gene id fezf2
gene name fezf2
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 36703255 ~ 36711295 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU59236
GGAAAAGCCTCATAAATGTAACCAGTGTGGGAAGGCGTTCAACAGAAGCTCCACGCTCAACACGCACGTGCGGATCCACGCCGGGTACAAGCCTTTCGTCTGTGAGTTCTGCGGGAAAGGTTTCCACCAGAAAGGAAACTACAAGAACCACAAGCTGACGCACAGCGGCGAGAAGCAGTACAAGTGCTCGATCTGCAACAAGGCCTTCCACCAGGTGTACAACCTCACCTtccacatgcacacgcacaacGACAAGAAGCCCTTCACCTGCGCCACCTGCGGCAAGGGCTTCTGCCGCAACTTTGACCTGAAGAAACACATCCGGAAGCTGCACGACAGCGTCTTCTCGCCAGCCACAAACGCCTCCAGAGAGCCGCAGAGCTGAGGCACGCTGCCCCATTTCCCCAAAATGCATTTCAATAATATTCCGACTGGGATTGTTggccctcaaaaaaaaaaaaaaaaaaaaaaaaagactggctTATAGCTCTGCATTTGTGGCCACGTTGAACAGTTGTGTTTCGAAAGGCCGGAGAGAAGGTGCATGGGGTAGTCCAATACAATTGGAAATAATCCCTTTAAAAAGAAGTGTGGTAATCCTGTAGGGTTTCAGATCCTGCCCAGGTGTCCCAGCAGGGACGCTGTAAAGGGAATACAGAACAGACCGGAGCACCTCTTATTACCACCGGTCTCCCATTAGGGCTGCTCAATTATGGAAAacatcataatcacgattattttttgGTCAGTTCTGAAATCGCGATTATtgaacacgattactcattgactttctGAAAGGTGTTGCGTTTTTTGAAGTGCAGAAACAGTGACTCAGTTAAACCAAtgaacagtgaaaacaccttgaaccgTGACATTTCCCCACGTTCAGAACACAAGAccaaataagagtttacttgcaaaacgtaatgtgctaAATAATCATTTTTCTGGATTACTCTATTTTTTTTGTGACCGTTAGGAGCCAAAATTGTAATCGCGATTAAAATGTTCAGTTCATTGCGCAGCCCTAGCTCCCGTACTGTGCGTCGGGATGTCATAGGGATTGGTTTCTGCACATTGACTGAACTTCTTCCTGCGTTGCCCGTTACGAGCATCAAACATGGGAGAAATAACCTGTCTCCACGATGGACCTGTAAATAATAGCTTATGGAAA
>XM_039799130.1
ggcgcTGCCAACATGTGACACAGAGCATCGCACCGATCCGAGCACTCCGGAGGTAAACTCCAACACAGACTCAACTTGACGCGCTCGCCTTCTCCACCAGCTCCATctattttctgtctgtctgtctttttttcttttctttttttttaaactcctcttctttttcttcttcctcttcttcctctccctaACGAGCCCTGTAATGTCCTGTTAATTCCGTGTGCGCTAGTTAATGAGCATTAATCCATCACCCCTGGATGCTATTGTTGCGGCGGGGGATGGCCATTTGAATGCAAATGCGTGACACCGTGACAGCAAGGTGCTTATTAAAGTGATGAGCGCTGCTGCGTGCTGTACCGGGGGACCAGCGGAGTGAGAGCAGCGGAGCGGGGTTAGCTGGAGGAGCGGGGCGGACTGGAGGAACTTCTgcaaaactaaaacaacaacaacaaaaactgcaAGAAccgcaacaataaaaaaaaaaaaaaaatggcaagtTCTGCGTCTCTGGAGACGGTGATGTCCTGCGGTAGGACCGGGCCATCCGCGGCCCCAAAGAGCCTCGCCTTCTCCATAGACCGGATCATGTCCAAGGGCTCGGAGCCGAGGGGCGCTGGAGAGGAGCGGCCGGAGGGGAGGAAGCTGCTGGGGCTCTGCTCCCCGATCCCCTGCATGATCCCGCTGCAGCCCTTCAGTTACGACCTGCAAGCCAAGGCGCTGATGAACTACTCGGAGCTGTGGAGAGCCAGCTTCCGGGGGACTTTTTGCGGCTCCGCGGCCGCTCCTTGCAAAGCCAGCTGCGGCATGTGCGCCAAGGCGGAGGCGGGCGTGAAGCAGCCGAGCAGGGTGGTGAAGCCGCAGGTGATCCAGCAGGCCGTGCccagcggcggcggcggcggcggttCTCTCTACTATCTCAACTACCTGGACTCTGCGTACCAGCAGCAGCCAGAGCTGCTGGCCGGACACTGGTTCTCCAGCCCGCAGGCCCACGCTTCTCTGTCGGCGCACCACAGACTCTTGCTGCTGGAGAACGCCAAGCTCGCCGGGGTGTGTGCCGAAAAGCTGCCCACGCCCCAGTACCCGCACAAGGAGCATCTGCCGGGGCAGCTGGACCAGATAGTGAAGGAGAGCCACGGCCTGAGCCCCGAGAAGAGCGGCGCCAAGACGCACAGCAAAGTCAGCGGCGGCAGCGGCGCAGACGGAAAACCCAAAAACTTTACGTGTGAAGTGTGTGGAAAgGTTTTTAACGCGCATTACAACCTGACCAGACACATGCCCGTGCACACCGGGGCCCGGCCCTTCGTCTGCAAGGTGTGCGGCAAAGGCTTCCGGCAGGCCAGCACGCTGTGCAGACACAAGATCAtccacacacagGAAAAGCCTCATAAATGTAACCAGTGTGGGAAGGCGTTCAACAGAAGCTCCACGCTCAACACGCACGTGCGGATCCACGCCGGGTACAAGCCTTTCGTCTGTGAGTTCTGCGGGAAAGGTTTCCACCAGAAAGGAAACTACAAGAACCACAAGCTGACGCACAGCGGCGAGAAGCAGTACAAGTGCTCGATCTGCAACAAGGCCTTCCACCAGGTGTACAACCTCACCTtccacatgcacacgcacaacGACAAGAAGCCCTTCACCTGCGCCACCTGCGGCAAGGGCTTCTGCCGCAACTTTGACCTGAAGAAACACATCCGGAAGCTGCACGACAGCGTCTTCTCGCCAGCCACAAACGCCTCCAGAGAGCCGCAGAGCTGAGGCACGCTGCCCCATTTCCCCAAAATGCATTTCAATAATATTCCGACTGGGATTGTTggccctcaaaaaaaaaaaaaaaaaaaaaaaaagactggctTATAGCTCTGCATTTGTGGCCACGTTGAACAGTTGTGTTTCGAAAGGCCGGAGAGAAGGTGCATGGGGTAGTCCAATACAATTGGAAATAATCCCTTTAAAAAGAAGTGTGGTAATCCTGTAGGGTTTCAGATCCTGCCCAGGTGTCCCAGCAGGGACGCTGTAAAGGGAATACAGAACAGACCGGAGCACCTCTTATTACCACCGGTCTCCCATTAGGGCTGCTCAATTATGGAAAacatcataatcacgattattttttgGTCAGTTCTGAAATCGCGATTATtgaacacgattactcattgactttctGAAAGGTGTTGCGTTTTTTGAAGTGCAGAAACAGTGACTCAGTTAAACCAAtgaacagtgaaaacaccttgaaccgTGACATTTCCCCACGTTCAGAACACAAGAccaaataagagtttacttgcaaaacgtaatgtgctaAATAATCATTTTTCTGGATTACTCTATTTTTTTTGTGACCGTTAGGAGCCAAAATTGTAATCGCGATTAAAATGTTCAGTTCATTGCGCAGCCCTAGCTCCCGTACTGTGCGTCGGGATGTCATAGGGATTGGTTTCTGCACATTGACTGAACTTCTTCCTGCGTTGCCCGTTACGAGCATCAAACATGGGAGAAATAACCTGTCTCCACGATGGACCTGTAAATAATAGCTTATGGAAATAAactaaatgttatttaaaatgtgaaccattgccatgttgtgtatttcacagaaaaaaactgttaatGTGAATAAATAAGTTATAACTTATGATGAAAACTGAATGTTTGAGCCATGTTGTTTCCGTTTTTTTGAAGGCATTTGGAAATAAAACAGTGAACTAA

Function

symbol description
fezf2 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and zinc ion binding activity. Acts upstream of or within several processes, including nervous system development; neuronal stem cell population maintenance; and regulation of Notch signaling pathway. Predicted to be active in nucleus. Is expressed in several structures, including forebrain; neural keel; optic vesicle; retina; and ventricular zone. Orthologous to human FEZF2 (FEZ family zinc finger 2).

NR:

description
PREDICTED: fez family zinc finger protein 2

GO:

id name namespace
GO:0021854 hypothalamus development biological_process
GO:0021879 forebrain neuron differentiation biological_process
GO:0071679 commissural neuron axon guidance biological_process
GO:0045892 negative regulation of transcription, DNA-templated biological_process
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K24502 FEZF; Fez family zinc finger protein

RNA

RNA id representative length rna type GC content exon number start site end site
TU59236 False 1174 lncRNA 0.47 2 36705467 36711130
XM_039799130.1 True 2715 mRNA 0.52 4 36703255 36711295

Neighbor

gene id symbol gene type direction distance location
cadpsa LOC103364890 coding upstream 27000 36431405 ~ 36676255 (+)
LOC120556721 NA coding upstream 334845 36366520 ~ 36368410 (+)
camk1ga LOC108240302,LOC103373651 coding upstream 375323 36301946 ~ 36327932 (+)
LOC120557073 LOC103374592,LOC100706250,LOC102300861,LOC101476702,LOC102207203,LOC102780650 coding upstream 453769 36243657 ~ 36249486 (+)
atxn7l2a atxn7l2,LOC103374593 coding upstream 460389 36216085 ~ 36242866 (+)
fhit fhit,LOC106632879 coding downstream 600767 37312062 ~ 37735317 (+)
LOC120558220 NA coding downstream 1240345 37951640 ~ 37956976 (+)
golt1a golt1a coding downstream 1386003 38097298 ~ 38103946 (+)
LOC120557040 LOC106528837,LOC107102779 coding downstream 1430298 38141593 ~ 38142268 (+)
LOC120557051 LOC106958509,LOC107690788,LOC107671222,LOC106963510,LOC107382435 coding downstream 1435445 38146740 ~ 38147062 (+)
G44153 NA non-coding upstream 23959 36678292 ~ 36679296 (+)
G44159 NA non-coding upstream 120367 36582527 ~ 36582888 (+)
G44092 NA non-coding upstream 323787 36376971 ~ 36379468 (+)
G44067 NA non-coding upstream 415959 36286037 ~ 36287296 (+)
G44044 NA non-coding upstream 492282 36210677 ~ 36210973 (+)
G44232 NA non-coding downstream 590929 37302224 ~ 37302516 (+)
G44247 NA non-coding downstream 1039772 37751067 ~ 37751312 (+)
LOC120556894 NA non-coding downstream 1053482 37764777 ~ 37832619 (+)
G44265 NA non-coding downstream 1238220 37949515 ~ 37949777 (+)
G44325 LOC104935308,LOC104932967 non-coding downstream 1448642 38159937 ~ 38160694 (+)
trnac-gca_18 NA other upstream 740645 35962539 ~ 35962610 (+)
G43924 NA other upstream 1037214 35664143 ~ 35666041 (+)
LOC120556915 NA other upstream 1217020 35463772 ~ 35486235 (+)
G43656 NA other upstream 2036073 34665236 ~ 34667182 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other upstream 3357449 33340284 ~ 33345806 (+)
plekha6 plekha6 other downstream 1249411 37960706 ~ 38096072 (+)
LOC120557027 NA other downstream 1454887 38166182 ~ 38174494 (+)
G44436 NA other downstream 1901342 38612637 ~ 38612971 (+)
LOC120557667 LOC102775714,LOC103375741 other downstream 2189277 38900572 ~ 38903056 (+)
LOC120557670 NA other downstream 2241823 38953118 ~ 38981733 (+)

Expression


Co-expression Network