G44401


Basic Information

Item Value
gene id G44401
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 38412827 ~ 38413939 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU59487
TTTAATTTTAGGAGCTTATTCTTAagctatgttcacacttggcatcttttttgacaagaaaaagttgactagggCGCTTTTGTAGTGAGAAAAAGGAGAAGCTGGCAGCGTTTGGTTCCAAAAAGCAGCTGAGAGcatcttttgttgctataacaatatctactgctacagtatcctAGAGCGCTATGTGGAGCGGTGCTAACGTCAGATTAAACTAagcggtggagcgagctagagaaaaaACCGAGAGAGAGATGTGCTAAcgttaaataaaacaaagtgagtTCCCTGTACAGGGAGCTCCCAGTCGTATTATGTAACTCGCCGTGCTCAGACTCcattttttcctgtttttatggAAACAACCGGTCTGCCTACTCCACTTGACGTAGggcgttttttattttatttttaatttttttcagaaaagttgaacttttttcaacttcaaccaacctccttacgctcaggactttttttgaaaacacgGTTTGATCCataggattataatgtaaaacagatgccaagtgtgaacatagaTGTTTCAGAAGCCCAACCACTTCACAAGGCTCTAATTAATTTGAGTGAATCAGTACAAATGTCTAAATCCTGCTGAAACATATGGAGTGTTTGGATTTCATTCTTTTCTCAAGTgtgtaatttattaatttcttaGCGCATCTTCAGCAGCTCACATCACTTTGTCTTTTACCCGCAGGTATTTTTAGATGTTTGATAATACGTGTGCTCTAATAACTCCACATTGTGGCTCTAAAGTGTTTGAATACAGCCCGGCATTGGCCTTGACATAAAACTGTGACGCCTGGAAAACGTGAACAAATTAACAGCACAAAGAAACGTGAAGATGCTTTTTACGGATTTCAAATCAAACGCCAATTTCAGGTGGTTATTTAGGTGAATCTAAGTAAGTTTTCTCGACGACCTTTTATGTGCTAAacgttttttggggtttttctgTTAACGTCTGCTCTTCTCATGTTTTGCACACTTCCTGTTCCTGATGCCTGAAAAAGATGCTGAAGTATATATTATGCCTTAAAGTATGCAGTGGAAGTCGTGCTTATGTTTGATATCACTGATatttggtttgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU59487 True 1113 lncRNA 0.38 1 38412827 38413939

Neighbor

gene id symbol gene type direction distance location
LOC120557646 LOC103371188,LOC100695319,LOC106525027,LOC101482544 coding upstream 3553 38366059 ~ 38409274 (+)
LOC120557037 LOC105888650,LOC105896821,LOC103395674,LOC101068541,LOC105891059 coding upstream 65584 38346807 ~ 38347243 (+)
LOC120557028 NA coding upstream 68576 38342443 ~ 38344251 (+)
LOC120557038 si:ch1073-153i20.5,LOC103462478,LOC107386469,LOC103381127,LOC103395676,LOC102204254,LOC101485372 coding upstream 86837 38325543 ~ 38325990 (+)
LOC120557035 LOC103395674,LOC101167724,LOC101068541,LOC105888650,LOC101170117 coding upstream 100340 38311854 ~ 38312487 (+)
rbpjl rbpjl,LOC100707106 coding downstream 320228 38734167 ~ 38784058 (+)
LOC120557663 NA coding downstream 443228 38857167 ~ 38886428 (+)
LOC120557676 NA coding downstream 483421 38897360 ~ 38913530 (+)
LOC120557116 NA coding downstream 527633 38941572 ~ 38942817 (+)
LOC120557678 NA coding downstream 531468 38945407 ~ 38947850 (+)
G44402 NA non-coding upstream 350 38410002 ~ 38412477 (+)
G44387 LOC104935308,LOC107719244,LOC104932967 non-coding upstream 80777 38331380 ~ 38332050 (+)
LOC120557055 NA non-coding upstream 164507 38247303 ~ 38248320 (+)
LOC120557056 samd3,LOC101476819 non-coding upstream 184477 38227579 ~ 38228350 (+)
G44325 LOC104935308,LOC104932967 non-coding upstream 252133 38159937 ~ 38160694 (+)
G44417 NA non-coding downstream 41983 38455922 ~ 38456336 (+)
G44419 NA non-coding downstream 42742 38456681 ~ 38457162 (+)
G44424 NA non-coding downstream 93129 38507068 ~ 38507690 (+)
G44430 NA non-coding downstream 107668 38521607 ~ 38522632 (+)
G44434 NA non-coding downstream 157958 38571897 ~ 38572141 (+)
LOC120557027 NA other upstream 238333 38166182 ~ 38174494 (+)
plekha6 plekha6 other upstream 316755 37960706 ~ 38096072 (+)
fezf2 fezf2 other upstream 1701532 36703255 ~ 36711295 (+)
trnac-gca_18 NA other upstream 2450217 35962539 ~ 35962610 (+)
G43924 NA other upstream 2746786 35664143 ~ 35666041 (+)
G44436 NA other downstream 198698 38612637 ~ 38612971 (+)
LOC120557667 LOC102775714,LOC103375741 other downstream 486633 38900572 ~ 38903056 (+)
LOC120557670 NA other downstream 539179 38953118 ~ 38981733 (+)
LOC120557680 NA other downstream 1333234 39747173 ~ 39774250 (+)
G44581 NA other downstream 1400021 39813960 ~ 39821908 (+)

Expression


Co-expression Network