G44424


Basic Information

Item Value
gene id G44424
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 38507068 ~ 38507690 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU59511
agaaaataaaggatacaatatgaattactaaacatagattaattaagaagatccccatacttttagagttacacagcacattggccaggagtcatacttgatgcctcctagcctatctcaaacatctctctcagataaggccagggatgattgggaatgtcttgctgcttgtctgcctaatctctgggatctctgttttcttcattttcaatcatgtcgccgtccatactactagtgctaacgttaccaccatcaagctgcaattatttgccgcaaatgaatgcagaatgcggccgaatctgtcaggtcgtcttgtagtggtgcgttacatgcaacgtagcctacagtatattcccatccaattagattgaattcggtattgatcacgtgaaaaataataacggtaactccagtgaaattatttgaaacttgctagtgaggactagattaggaccgtatttaaagctgatgctggtttcaaacttcgcccccccccaagtgtgtctgtaaaacacagacagagacaacttctctcttttgatgctttacaagcaacgtgaaacctagctaacaggtgaagaacacaaacaacaaaatcactagctaacctactttaactgtgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU59511 True 623 lncRNA 0.41 1 38507068 38507690

Neighbor

gene id symbol gene type direction distance location
LOC120557646 LOC103371188,LOC100695319,LOC106525027,LOC101482544 coding upstream 97794 38366059 ~ 38409274 (+)
LOC120557037 LOC105888650,LOC105896821,LOC103395674,LOC101068541,LOC105891059 coding upstream 159825 38346807 ~ 38347243 (+)
LOC120557028 NA coding upstream 162817 38342443 ~ 38344251 (+)
LOC120557038 si:ch1073-153i20.5,LOC103462478,LOC107386469,LOC103381127,LOC103395676,LOC102204254,LOC101485372 coding upstream 181078 38325543 ~ 38325990 (+)
LOC120557035 LOC103395674,LOC101167724,LOC101068541,LOC105888650,LOC101170117 coding upstream 194581 38311854 ~ 38312487 (+)
rbpjl rbpjl,LOC100707106 coding downstream 226477 38734167 ~ 38784058 (+)
LOC120557663 NA coding downstream 349477 38857167 ~ 38886428 (+)
LOC120557676 NA coding downstream 389670 38897360 ~ 38913530 (+)
LOC120557116 NA coding downstream 433882 38941572 ~ 38942817 (+)
LOC120557678 NA coding downstream 437717 38945407 ~ 38947850 (+)
G44419 NA non-coding upstream 49906 38456681 ~ 38457162 (+)
G44417 NA non-coding upstream 50732 38455922 ~ 38456336 (+)
G44401 NA non-coding upstream 93129 38412827 ~ 38413939 (+)
G44402 NA non-coding upstream 94591 38410002 ~ 38412477 (+)
G44387 LOC104935308,LOC107719244,LOC104932967 non-coding upstream 175018 38331380 ~ 38332050 (+)
G44430 NA non-coding downstream 13917 38521607 ~ 38522632 (+)
G44434 NA non-coding downstream 64207 38571897 ~ 38572141 (+)
G44438 NA non-coding downstream 112865 38620555 ~ 38621027 (+)
G44449 NA non-coding downstream 175105 38682795 ~ 38683091 (+)
G44451 NA non-coding downstream 175471 38683161 ~ 38683461 (+)
LOC120557027 NA other upstream 332574 38166182 ~ 38174494 (+)
plekha6 plekha6 other upstream 410996 37960706 ~ 38096072 (+)
fezf2 fezf2 other upstream 1795773 36703255 ~ 36711295 (+)
trnac-gca_18 NA other upstream 2544458 35962539 ~ 35962610 (+)
G43924 NA other upstream 2841027 35664143 ~ 35666041 (+)
G44436 NA other downstream 104947 38612637 ~ 38612971 (+)
LOC120557667 LOC102775714,LOC103375741 other downstream 392882 38900572 ~ 38903056 (+)
LOC120557670 NA other downstream 445428 38953118 ~ 38981733 (+)
LOC120557680 NA other downstream 1239483 39747173 ~ 39774250 (+)
G44581 NA other downstream 1306270 39813960 ~ 39821908 (+)

Expression


Co-expression Network