G44454


Basic Information

Item Value
gene id G44454
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 38709982 ~ 38713823 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU59542
GAAAAGTTCTTTTATTGCCTTCTGTGCTGTAATACATCATccgaaaaaatacaaaaaggtaataatatacaaaaacataCAGGCATTCAAATATAAAGGGGTATACATTTGTGGTGGTCTTTTGTTTTTATACAAAACtacaagagagagacagacaatcTACCAAAGTTATGTTGGTCATTAATTTACATACAGTGCCCTGTGAAGCCTCTCATTCTCCGTTAGTCTGAAGTAACTAGATAATGTCAGACTGGTCAGGCATTGCTGATGATGTAAAGGACCACTTTAGGGCAAAGATAgacaaaataatgtaatgtgAACCACTTTTTTTGGTATTAATAATACTCAGACATGTTTAGGGCACTGTAAAACAACATCTAGAAAGTGCAGAGTAGAGAACCAATTTGATTAACAAATGTGAGACCATATTTATTTTGAGTAAAATACTGGTTCCTGTCATATCTGGTTCATCACATTTTCTCTGTCAACAACAGACCACAGCTTTAGTGAACAGTGATACTTGAAACTTCTTAGCTTCCCTTTTAGTTTTGAATCTAAACCACTTTCCTCTTCATCAGTCCTCAGACCTGTGATCAAAACTAGTTTAGACGGGGAAACAAGTAATGATTTGGTATGAACATGACAATTTAATATTGGGAGTGGTAACAACACTTCATTTTATAAAATCTCTTTTCTCTAAATTGCTATTCTACTGTGGTAGAAAAGCAAACAATCTGCTATAAATACATCACATTTAACAAACCGTACAAAACAGATCAAGTATAAAAGGCACTAACGAAAAATGTGTGGCGACGAATGAATACTGAGCGTGATGAAAACTTGTGTTTTCACTATTATTATTTGTTGTGCTTGTGTCTAATATCTACACTACATTGATTACATCTAGTTTACAAAGACAGCCAACATGCCTGCAAtcccctttgtgtgtgtgactgtttaTCCTTTATGTAGGTACACACAAATCCCAAAAGTTAAAGGGTAAATTTGGTATtattcaacctggaccctattgacttatgtttttgtgtctaagtgactgatgggaacaacgaTCTTTATCATCGCAAAAcgcacttcattcaaagtcaacagaaacaaaataaaactatcaaatgCCGTCTTGGTTCGTCCTTTCTACTGTTCCAACAGTCACCACTCTGGATTGATTGAAACTAAACCCTTAATTTACCTATTTACATGTATACATGTGTTGGCTCTGTACAGGCTAAAAGtattgattatttaaatgaagtctggtgagtttggcaATAAGGATTTCTAGGCTGTTTCTGCTTAATCAAAAAGGatcttattttttaacaaaaaggtccatctctgtagggatcctctgcataatgttgtcagacacttggaataataatctgagcctgtcggtggcaaaaacagaacttttagatGACTGAAATTGCCGATTCACATTTGCTCTACGTATTTGATTACATTCCAGTTGTGGCTGCCGGTTTACAGCGTTCTTGCTCAATAccggaccaatttcaaagatgttTGTTCACATCAGTCATGTAGACAGCAATGCATTGGTAAAATAGGATCCATGTTGGAAAATACCAAAATAACTCTTTAACAGATGTCCTGGGGAAACTTAGAAATGTAATCTGTTTTATGAAGGCATTTGTTTACAGTTGTTTTGCCCAGTGATGGGTGGGAAAGTGGATGTagtgtttgttgtattttgtattctTTTAAACAAAGTGTACAAATTAGGTAATTTACATTGATACCAGAAATATGATTCTATATCACAAGCTTTCAGATACGTGTCATCCTCATAAAGGTGAAGAGCAACAAGCCGACTGAAGGCTACAAAGGCTTTGTGAAAAGACACTTTGGTTTTGTCCATTGATTGAAAAGGTTTCTGATGtgccctcctcttcctcactctgttattctttctttttccctgtGGCGTCCCGTCCGCTCACTGCGATGAAGATCACTTCCTCACTTCCTGGAGAGAAGCTGGTTCTCCAGCTGCTCCAGACGAGCAGTCATCCCAGATAgTTTCTGTGTGAGCTGCTCCAGGCTGCTCATGGTGGCCTGCTGGAACTCCACCAGACTCTCGCAGGCACACGGGTCCTTCACCTCGATCTCCCCCTGACTCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU59542 True 2164 lncRNA 0.38 2 38709982 38713823

Neighbor

gene id symbol gene type direction distance location
LOC120557646 LOC103371188,LOC100695319,LOC106525027,LOC101482544 coding upstream 300708 38366059 ~ 38409274 (+)
LOC120557037 LOC105888650,LOC105896821,LOC103395674,LOC101068541,LOC105891059 coding upstream 362739 38346807 ~ 38347243 (+)
LOC120557028 NA coding upstream 365731 38342443 ~ 38344251 (+)
LOC120557038 si:ch1073-153i20.5,LOC103462478,LOC107386469,LOC103381127,LOC103395676,LOC102204254,LOC101485372 coding upstream 383992 38325543 ~ 38325990 (+)
LOC120557035 LOC103395674,LOC101167724,LOC101068541,LOC105888650,LOC101170117 coding upstream 397495 38311854 ~ 38312487 (+)
rbpjl rbpjl,LOC100707106 coding downstream 20344 38734167 ~ 38784058 (+)
LOC120557663 NA coding downstream 143344 38857167 ~ 38886428 (+)
LOC120557676 NA coding downstream 183537 38897360 ~ 38913530 (+)
LOC120557116 NA coding downstream 227749 38941572 ~ 38942817 (+)
LOC120557678 NA coding downstream 231584 38945407 ~ 38947850 (+)
G44451 NA non-coding upstream 26521 38683161 ~ 38683461 (+)
G44449 NA non-coding upstream 26891 38682795 ~ 38683091 (+)
G44438 NA non-coding upstream 88955 38620555 ~ 38621027 (+)
G44434 NA non-coding upstream 137841 38571897 ~ 38572141 (+)
G44430 NA non-coding upstream 187350 38521607 ~ 38522632 (+)
LOC120557691 NA non-coding downstream 92623 38806446 ~ 38813444 (+)
G44488 NA non-coding downstream 110852 38824675 ~ 38825019 (+)
G44489 NA non-coding downstream 127211 38841034 ~ 38841233 (+)
G44499 NA non-coding downstream 274245 38988068 ~ 38988533 (+)
LOC120557696 NA non-coding downstream 386162 39099985 ~ 39100496 (+)
G44436 NA other upstream 97011 38612637 ~ 38612971 (+)
LOC120557027 NA other upstream 535488 38166182 ~ 38174494 (+)
plekha6 plekha6 other upstream 613910 37960706 ~ 38096072 (+)
fezf2 fezf2 other upstream 1998687 36703255 ~ 36711295 (+)
trnac-gca_18 NA other upstream 2747372 35962539 ~ 35962610 (+)
LOC120557667 LOC102775714,LOC103375741 other downstream 186749 38900572 ~ 38903056 (+)
LOC120557670 NA other downstream 239295 38953118 ~ 38981733 (+)
LOC120557680 NA other downstream 1033350 39747173 ~ 39774250 (+)
G44581 NA other downstream 1100137 39813960 ~ 39821908 (+)
LOC120557666 NA other downstream 1442385 40156208 ~ 40431341 (+)

Expression


Co-expression Network