LOC120557689


Basic Information

Item Value
gene id LOC120557689
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 39653278 ~ 39655738 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU59657
CGGCGTTTGTCCGTCAGACAAAGAGGGTGAGTAGAACTGAATTCTATTGGCTCTGACGGTTCCAGACAACACCCGCTTGCGCATGCGCAAAGTGGGTCTGTGTCGTCATCGTCAGGCTAGCTTAACCTGGACCGGTTCGGATTGAATTTGGGGGTAACAGCTCAAACGAGATTTGGAAGAACATGACCTGAAAGTCTCCTTCAACGGTGAGTTGTCCCCATACCTAACCCAACCATCTATTTAAATCTGAAAGTAACTTACTGCACTTCTGAG
>XR_005638995.1
CTATTGGCTCTGACGGTTCCAGACAACACCCGCTTGCGCATGCGCAAAGTGGGTCTGTGTCGTCATCGTCAGGCTAGCTTAACCTGGACCGGTTCGGATTGAATTTGGGGGTAACAGCTCAAACGAGATTTGGAAGAACATGACCTGAAAGTCTCCTTCAACGAACTATGACAAATAAAATGATGGCCATAATGAGCCTCAGAGGAAGAAGTGGGAAGGTTGCCTTCATGAAGACTCATCTCTACAAGATAATCTGTGACGCTGTCTTGAGCTCATATGATAAAACTACAACAAAAGTAGACAAATACATGGCCAAATACTTGATATATGCACCAGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU59657 False 273 lncRNA 0.48 2 39653278 39653916
XR_005638995.1 True 339 lncRNA 0.45 4 39653321 39655738

Neighbor

gene id symbol gene type direction distance location
LOC120557118 NA coding upstream 339596 39294637 ~ 39313682 (+)
LOC120557665 NA coding upstream 376299 39249166 ~ 39276979 (+)
LOC120557683 NA coding upstream 510928 39122788 ~ 39142350 (+)
LOC120557678 NA coding upstream 705428 38945407 ~ 38947850 (+)
LOC120557116 NA coding upstream 710461 38941572 ~ 38942817 (+)
LOC120557124 NA coding downstream 135273 39791011 ~ 40446646 (+)
LOC120557127 NA coding downstream 899212 40554950 ~ 40583705 (+)
LOC120557675 LOC107573218 coding downstream 989450 40645188 ~ 40647514 (+)
LOC120557684 NA coding downstream 1029084 40684822 ~ 40716121 (+)
LOC120557681 NA coding downstream 1065958 40721696 ~ 40734477 (+)
LOC120557690 NA non-coding upstream 6677 39644755 ~ 39646601 (+)
LOC120557693 NA non-coding upstream 43074 39608721 ~ 39610204 (+)
LOC120557694 NA non-coding upstream 448060 39203669 ~ 39205218 (+)
LOC120557696 NA non-coding upstream 552782 39099985 ~ 39100496 (+)
G44499 NA non-coding upstream 664745 38988068 ~ 38988533 (+)
LOC120557695 NA non-coding downstream 85249 39740987 ~ 39743350 (+)
G44562 NA non-coding downstream 118875 39774613 ~ 40227520 (+)
G44585 NA non-coding downstream 189443 39845181 ~ 39847645 (+)
G44590 NA non-coding downstream 242831 39898569 ~ 39900323 (+)
G44595 NA non-coding downstream 304638 39960376 ~ 40275840 (+)
LOC120557670 NA other upstream 671545 38953118 ~ 38981733 (+)
LOC120557667 LOC102775714,LOC103375741 other upstream 750222 38900572 ~ 38903056 (+)
G44436 NA other upstream 1040307 38612637 ~ 38612971 (+)
LOC120557027 NA other upstream 1478784 38166182 ~ 38174494 (+)
plekha6 plekha6 other upstream 1557206 37960706 ~ 38096072 (+)
LOC120557680 NA other downstream 91435 39747173 ~ 39774250 (+)
G44581 NA other downstream 158222 39813960 ~ 39821908 (+)
LOC120557666 NA other downstream 500470 40156208 ~ 40431341 (+)
G44690 NA other downstream 824938 40480676 ~ 40506570 (+)
LOC120557692 NA other downstream 848456 40504194 ~ 40506056 (+)

Expression


Co-expression Network