G44590


Basic Information

Item Value
gene id G44590
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 39898569 ~ 39900323 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU59711
tttaaatttaactttttaatactttaactacattttcctgaagataattacagacttttacttaagtaacattttcaatgcaggacattTGTAACAGTATTTACAGTGTTGTATTAGTACttctactgaagtaaaggatcccCCGTGTTCACTCCTCCTGCGGATAGACAgctttgttttacatttgttcTAATCTTTGTTTGTGAACATGCACATTCCCTcatttatgttatgtatgttatGTGCATTTATGTGAttgaaacaaactaaaaaaaacaaaaaaaacaactaaacttGTCATATTGTAGGCTAGTTTCTACTTTAGCTTATCAAACAAAGAACCTACAGGCAGTTGGCAGGATGGACAGTTTCTGGGAAATGCACAACAAAGCCCCACCTTCTCAGGACACACCGGACACACGCACGGGGATACAcacggggacacacacacaccataaataTGTACATCAGTCTCAGCAGAAATGTTACGGTGGATAGTCGTCTGTGTGGCTACACAGCGATAGCGGTCGCTCTTGGTCACATTGAGAGTGATGTAGAAAAAGCCTCTTTTTTCGACCTGGGGCTCCTCAGCAGGTAGTTGGTTTCCAGCACTGTCCTGCCACTTTACTTCAGGTTCTGGATTGCCATTAACTTTACACTGCAGGAGCTCCCAGTCCTTTGTTGCCTTAAGTGTTGTGATGTATGGTTCTTGAGCTGCACCAACAACAAGCTCAATGTAGAATGTTTGAGGTGGCTTAAGTTGTGGAAAATCACAGGTGTATTCTCCACTGTCAGATATCTTTGTATTTCTGATGATTATGGAGGCGTTGCCGTGTTCCAGTTCTTCTGGAAAATGAGAGACTCGACCTTTGAAcgcttcactctgaccatctaGACCGTTGTTGTAATGACTGCCTGCGTTGTAGTCAAACACCTCCTTCAGACCATCATCTTTCTGAGCAACTTTCCTCCAGACAAACAGTTTATACTCAATGTCCTCCTTGGTGCTGGGAGAGCAGGGTAACATTACATCAGCCCCTCCTTCCACCGAAATGACTGTTGGTCCTGAAAGATAAAATCATGTATTAatcagtatgtttacatgcagagTAATTAAGTTAAGACAGCTTTTGTG

Function

NR:

description
PREDICTED: calmodulin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU59711 True 1135 lncRNA 0.41 2 39898569 39900323

Neighbor

gene id symbol gene type direction distance location
LOC120557118 NA coding upstream 584887 39294637 ~ 39313682 (+)
LOC120557665 NA coding upstream 621590 39249166 ~ 39276979 (+)
LOC120557683 NA coding upstream 756219 39122788 ~ 39142350 (+)
LOC120557678 NA coding upstream 950719 38945407 ~ 38947850 (+)
LOC120557116 NA coding upstream 955752 38941572 ~ 38942817 (+)
LOC120557127 NA coding downstream 654627 40554950 ~ 40583705 (+)
LOC120557675 LOC107573218 coding downstream 744865 40645188 ~ 40647514 (+)
LOC120557684 NA coding downstream 784499 40684822 ~ 40716121 (+)
LOC120557681 NA coding downstream 821373 40721696 ~ 40734477 (+)
LOC120557677 NA coding downstream 838568 40738891 ~ 40798049 (+)
G44527 NA non-coding upstream 33056 39499099 ~ 39865513 (+)
G44585 NA non-coding upstream 50924 39845181 ~ 39847645 (+)
LOC120557695 NA non-coding upstream 155219 39740987 ~ 39743350 (+)
LOC120557689 NA non-coding upstream 242831 39653278 ~ 39655738 (+)
LOC120557690 NA non-coding upstream 251968 39644755 ~ 39646601 (+)
G44595 NA non-coding downstream 60053 39960376 ~ 40275840 (+)
G44645 NA non-coding downstream 265161 40165484 ~ 40167629 (+)
G44662 NA non-coding downstream 391041 40291364 ~ 40292492 (+)
G44663 NA non-coding downstream 398304 40298627 ~ 40299270 (+)
G44660 NA non-coding downstream 398973 40299296 ~ 40301807 (+)
G44581 NA other upstream 76661 39813960 ~ 39821908 (+)
LOC120557680 NA other upstream 124319 39747173 ~ 39774250 (+)
LOC120557670 NA other upstream 916836 38953118 ~ 38981733 (+)
LOC120557667 LOC102775714,LOC103375741 other upstream 995513 38900572 ~ 38903056 (+)
G44436 NA other upstream 1285598 38612637 ~ 38612971 (+)
LOC120557666 NA other downstream 255885 40156208 ~ 40431341 (+)
G44690 NA other downstream 580353 40480676 ~ 40506570 (+)
LOC120557692 NA other downstream 603871 40504194 ~ 40506056 (+)
LOC120557674 NA other downstream 619619 40519942 ~ 40547848 (+)
LOC120557687 NA other downstream 765876 40666199 ~ 40668742 (+)

Expression


Co-expression Network