LOC120557666


Basic Information

Item Value
gene id LOC120557666
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 40156208 ~ 40431341 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU59760
CAAAACCCCCTCCGGTAGGAGTGTCTCCATCTCCGTTATTAGAGACGTTGTGATGTTAAAGTGATGTCTGATCTTTAGGAGACATCGACAGCGATGgagcttcttcctcttctgtgtctctgcctcCTGACTCGCTCTGGAATCACGTCTGCTCAACTAAACGGGCCACCATTGATTAAAGTGGAACAAGACAGAGATGTTGTGTTACCCTGCTCCCCCAGCACCAAGGAGAACATTGAGTTTAAACTCTTTGACTGGAAGAAAGTTGCTCAGAAAGATGCTGGAGAGAAGGAGGTGTTCATGTATGACGCAGGCATTCATTACAACAGCGGTCGTCCAGGTCAGAGTGAGCAGTTCAAAGGTCGAGTCTCTCATTTTCCAGATGAACTGAAACACGGCAACGCCTCCATAATCATCAGAAATACAAAGATATCTGACAGTGGAGAATACACCTGTCATTTTCCTCGTCTTCAGCCACCTCAAATATTCCACATTAAGCTTGTTGTTGG
>XM_039798212.1
CCGGTAGGAGTGTCTCCATCTCCGTTATTAGAGACGTTGTGATGTTAAAGTGATGTCTGATCTTTAGGAGACATCGACAGCGATGgagcttcttcctcttctgtgtctctgcctcCTGACTCGCTCTGGAATCACGTCTGCTCAACTAAACGGGCCACCATTGATTAAAGTGGAACAAGACAGAGATGTTGTGTTACCCTGCTCCCCCAGCACCAAGGAGAACATTGAGTTTAAACTCTTTGACTGGAAGAAAGTTGCTCAGAAAGATGCTGGAGAGAAGGAGGTGTTCATGTATGACGCAGGCATTCATTACAACAGCGGTCGTCCAGGTCAGAGTGAGCAGTTCAAAGGTCGAGTCTCTCATTTTCCAGATGAACTGAAACACGGCAACGCCTCCATAATCATCAGAAATACAAAGATATCTGACAGTGGAGAATACACCTGTCATTTTCCTCGTCTTCAGCCACCTCAAATATTCCACATTAAGCTTGTTGTTGGTGCGTCGCCAAAACCATCCATCACATCACCTAAGGAAACAAAGGACTGGTCGCTGCTGCGTTGTGAAGTTCATGGCAACCCAGAACCTGAAGTAGAGTGGCAGGACAGTGCTGGAAACAAACTACCTGCTGAGAAGCCCCAGGTCGAAAAAATAGGAGACCTTTTCTACATCACTCTCAACGTAACCGTGACCAAGAGCGACCGCTATCGCTGTGTAGCCACACAGGAGACAATCAGCCATCAGATTTCTGCTGAGACCGATGTGTATATCAGTGGTGCATCTCCAAAACCATACCTCAACATACTTGAAACAAAGGATGGAGTGCTGCTGCAGTGTGAAGTTCTTGGTGCTTCTCCAGAACCTGAAGTAAAGTGGCAGGACAGTGATGGGAACATGATTACTTCTGAAGAACCACAGGTCACAAAAAAAGGAGGCAGCTACGACGTCACCCTCCGAGCTTCTGTGACCAAAACTGACCACTATCGCTGTGTTGTCACACAGAAGACGATCAACCATTCCATTTCTGATAAGATTTATGTGCCTCTAAATGCTGGATCGCAGACACATCCTTCAGATCAAAACTTGAGGAAAGTGATGATTGGAGTTGCTGTTGGAGTTCTCGCagaatttctgtttttgtaGGTGTTCATCTAGCTCCGCCTGGAAATGACTCTAACGGTCTACGGTTCATTGTGAGACAAAAGTGACCTGGCCGAAAAGGAGCCAGAGCCCCAATCAACACCAACTTTAAAGTTCTCTGCAGATGTGTGTGGTATTGTACTTGTTTTCTAGCGAGGACCGCTTTGAATTTTAGAACAAAAGAGTGAGGACATTTTTAGAGATTGAGGACATTTTCTCTTCAACTTCTTAAAAGGTCAGTTTGAGAGTTAAGACCTAGAATTGATAATATTGataatgttaaaaaagcaaatgtgaaagacagaaatgttgcacatactcacacacagtaTGTGCAACATTTCTGTGGCGGTATATTGACTTTTCACAAGATGTGGAATGAGAATTTATTGATATGTTGAGTATATATTGATATAGTGTTAcatatatgacattttttctgCTCATTGAATTCCCAAAAGTCTCTGCTTTCCAGTCAGAAGTCAGTGTGcagaaatatacaaatacaCCATTTTAggtgaaaatacagtacaggccaaaagtttggacacaccttctcactcaatgtgttcctttattttcatgactatttattttgtagattatcactgaaggcatcaaaactatgaatgaacacatatggaattatgtacttaacaaaaaagttacAAGATACAATGCAAACCCtttgtgttctctcaatgagcttcatgaggtagtcacctgaaatggttttcacttcacaggtgtgctttgtcagggttaattagtggaattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU59760 False 509 TUCP 0.46 2 40156208 40163610
XM_039798212.1 True 1916 mRNA 0.42 7 40156219 40431341

Neighbor

gene id symbol gene type direction distance location
LOC120557118 NA coding upstream 842526 39294637 ~ 39313682 (+)
LOC120557665 NA coding upstream 879229 39249166 ~ 39276979 (+)
LOC120557683 NA coding upstream 1013858 39122788 ~ 39142350 (+)
LOC120557678 NA coding upstream 1208358 38945407 ~ 38947850 (+)
LOC120557116 NA coding upstream 1213391 38941572 ~ 38942817 (+)
LOC120557127 NA coding downstream 123609 40554950 ~ 40583705 (+)
LOC120557675 LOC107573218 coding downstream 213847 40645188 ~ 40647514 (+)
LOC120557684 NA coding downstream 253481 40684822 ~ 40716121 (+)
LOC120557681 NA coding downstream 290355 40721696 ~ 40734477 (+)
LOC120557677 NA coding downstream 307550 40738891 ~ 40798049 (+)
G44590 NA non-coding upstream 255885 39898569 ~ 39900323 (+)
G44527 NA non-coding upstream 290695 39499099 ~ 39865513 (+)
G44585 NA non-coding upstream 308563 39845181 ~ 39847645 (+)
LOC120557695 NA non-coding upstream 412858 39740987 ~ 39743350 (+)
LOC120557689 NA non-coding upstream 500470 39653278 ~ 39655738 (+)
G44634 NA non-coding downstream 12532 40443873 ~ 40627311 (+)
G44689 NA non-coding downstream 41283 40472624 ~ 40494622 (+)
LOC120557699 NA non-coding downstream 170087 40601428 ~ 40609564 (+)
G44637 NA non-coding downstream 171222 40602563 ~ 40603037 (+)
LOC120557700 NA non-coding downstream 224518 40655859 ~ 40656646 (+)
G44581 NA other upstream 334300 39813960 ~ 39821908 (+)
LOC120557680 NA other upstream 381958 39747173 ~ 39774250 (+)
LOC120557670 NA other upstream 1174475 38953118 ~ 38981733 (+)
LOC120557667 LOC102775714,LOC103375741 other upstream 1253152 38900572 ~ 38903056 (+)
G44436 NA other upstream 1543237 38612637 ~ 38612971 (+)
G44690 NA other downstream 49335 40480676 ~ 40506570 (+)
LOC120557692 NA other downstream 72853 40504194 ~ 40506056 (+)
LOC120557674 NA other downstream 88601 40519942 ~ 40547848 (+)
LOC120557687 NA other downstream 234858 40666199 ~ 40668742 (+)
LOC120557312 NA other downstream 417474 40848815 ~ 40931383 (+)

Expression


Co-expression Network