G44645


Basic Information

Item Value
gene id G44645
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 40165484 ~ 40167629 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU59779
tgtgtgtgtgtgtgtgtgtgtgtgtgtggggtctaatgttgtggtgtagcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtagggtctaatgttgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagggtctaatgttgtggtgtattagtgagtgtgtgtgtgtagggtctaatgttgtggtgtattagtgtgtgtgtgtgtgtgtagggtctaatgttgtggtgtattagtgagtgtgtgtgtgtagggtctaatgttgtggtgtattagtgagtgtgtgtgtgtgtgtgtagggtc
>TU59780
tgtgtgtgtgtgtgtgtgtgtgtgtgtggggtctaatgttgtggtgtgtgtgtgtgtagggtctaatgttgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagggtctaatgttgtggtgtattagtgagtgtgtgtgtgtagggtctaatgttgtggtgtattagtgtgtgtgtgtgtgtgtagggtcgaATGTTGTGGTGtattagtgagtgtgtgtgtgtagggtctaatgttgtggtgtattagtgagtgtgtgtgtgtagggtctaatgttgtggtgtattagtgagtgtgtgtgtgtagggtctaatgttgtggtgtattagtgagtgtgtgtgtgtgtgtggtctaatgtt
>TU59781
tgtgtgtgtgtgtgtgtgtgtgtgtgtggggtctaatgttgtggtgtagcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtagggtctaatgttgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagggtctaatgttgtggtgtattagtgagtgtgtgtgtgtagggtctaatgTTGTGGTGtattagtgagtgtgtgtgtgtagggtctaatgttgtggtgtattagtgagtgtgtgtgtgtagggtctaatgttgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU59779 False 302 lncRNA 0.46 2 40165484 40166527
TU59780 True 362 lncRNA 0.44 5 40165484 40167629
TU59781 False 264 lncRNA 0.46 2 40165484 40166010

Neighbor

gene id symbol gene type direction distance location
LOC120557118 NA coding upstream 851802 39294637 ~ 39313682 (+)
LOC120557665 NA coding upstream 888505 39249166 ~ 39276979 (+)
LOC120557683 NA coding upstream 1023134 39122788 ~ 39142350 (+)
LOC120557678 NA coding upstream 1217634 38945407 ~ 38947850 (+)
LOC120557116 NA coding upstream 1222667 38941572 ~ 38942817 (+)
LOC120557127 NA coding downstream 387321 40554950 ~ 40583705 (+)
LOC120557675 LOC107573218 coding downstream 477559 40645188 ~ 40647514 (+)
LOC120557684 NA coding downstream 517193 40684822 ~ 40716121 (+)
LOC120557681 NA coding downstream 554067 40721696 ~ 40734477 (+)
LOC120557677 NA coding downstream 571262 40738891 ~ 40798049 (+)
G44590 NA non-coding upstream 265161 39898569 ~ 39900323 (+)
G44585 NA non-coding upstream 317839 39845181 ~ 39847645 (+)
LOC120557695 NA non-coding upstream 422134 39740987 ~ 39743350 (+)
LOC120557689 NA non-coding upstream 509746 39653278 ~ 39655738 (+)
LOC120557690 NA non-coding upstream 518883 39644755 ~ 39646601 (+)
G44662 NA non-coding downstream 123735 40291364 ~ 40292492 (+)
G44663 NA non-coding downstream 130998 40298627 ~ 40299270 (+)
G44660 NA non-coding downstream 131667 40299296 ~ 40301807 (+)
G44664 NA non-coding downstream 137585 40305214 ~ 40311637 (+)
G44680 NA non-coding downstream 219937 40387566 ~ 40393706 (+)
G44581 NA other upstream 343576 39813960 ~ 39821908 (+)
LOC120557680 NA other upstream 391234 39747173 ~ 39774250 (+)
LOC120557670 NA other upstream 1183751 38953118 ~ 38981733 (+)
LOC120557667 LOC102775714,LOC103375741 other upstream 1262428 38900572 ~ 38903056 (+)
G44436 NA other upstream 1552513 38612637 ~ 38612971 (+)
G44690 NA other downstream 313047 40480676 ~ 40506570 (+)
LOC120557692 NA other downstream 336565 40504194 ~ 40506056 (+)
LOC120557674 NA other downstream 352313 40519942 ~ 40547848 (+)
LOC120557687 NA other downstream 498570 40666199 ~ 40668742 (+)
LOC120557312 NA other downstream 681186 40848815 ~ 40931383 (+)

Expression


Co-expression Network