G44711


Basic Information

Item Value
gene id G44711
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 40713681 ~ 40938117 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU59858
tgtggttagccagctcatttcggactgtgacgtcacagtccgagccgattttgaacagctcactaggagactaaaggcaggacacattcagaaaccgtatctcactcagaacagcatggatggatttttttcaaagtttgtatgtgtgtggaagcaccagagacacaaaagaacaccccaaatcccagaaaaagtgattttttcataatatgggcactttaaagagagttagttgtgggttattaattgttgtgttataaagttactaccatgagtgagaagggtacgcagttaacgGGTCCAGTGAGGCTacggagaagaaaaaaaaaaaaactggatatattttgtcaatatcggggccgatcctaatatcggatcggtgtACTCCTAGTAACCCCCTTTTTCCCGTTTTCTGAGGCTGACAGAGGGTTTTCTGAGGCTGCTTTTTCTGGGATTGAAAGAGGTTTTTCTGACGCTGAGGCCGTTTTGTTTGAGTCTGACACCTGAGTCTGAGATCTGACGATGTCCTAAAATGAACACTGTACTCAGGTTTTAAGATTGAGCTCAGAATCAGGTTTGGGTTAAACATTTAGATCTGAAGTTTGATGTTAAGGAATGCATTATTTCAACCAGTGTCCTCACAAGTATAGAAG
>TU59859
ttaaaattcaggtcttagtccatgactacaccaagatttctggctttgtcttttgtttttaacattgtcgtttgaagctgagtgctgacttTAATCGTtactcttttgctccaaaaacaaccacctcagttttttcGAACCGTCTAATCAAAATGTCCGATGATAGAAGTTAGTTGGAGATAATGATGGTCTGACGATTTTACTGTAAAAAGATATTTAAgctgattttctatttttgtactTTCTGATGTTTGAAATGTCTACGCTGCACTCTGCTCTTTGTTGTATGAATTTACAATGTGTTGTCGGTCCATGCGGGCTGGCCATAGTTATATACATGACGTCATGATCAAAATGTCATTCATTCAATTATTCTAAAACTCAAAGGAAGCTTGTGAAATGAGGCAATTATGGTTGATACTATTTTCTCTTCCTCTAAAAGTGGTTTAAAGTTCAGAAGTCTGAATAAGTTCAACTAGAGagtgactttattcttaatTCTGAATAAAGAAGAACTCTCTTCCAGATATGAATGACTTGATAATCATTATGAAGATAAAGTTGTGATAATAATACCAAC
>TU59861
ttaaaattcaggtcttagtccatgactacaccaagatttctggctttgtcttttgtttttaacattgtcgtttgaagctgagtgctgacttTAATCGTtactcttttgctccaaaaacaaccacctcagttttttcGAACCGTCTAATCAAAATGTCCGATGATAGAAGTTAGTTGGAGATAATGATGGTCTGACGATTTTACTGTAAAAAGATATTTAAgctgattttctatttttgtactTTCTGATGTTTGAAATGTCTACGCTGCACTCTGCTCTTTGTTGTATGAATTTACAATGTGTTGTCGGTCCATGCGGGCTGGCCATAGTTATATACATGACGTCATGATCAAAATGTCATTCATTCAATTATTCTAAAACTCAAAGGAAGCTTGTGAAATGAGGCAATTATGGTTGATACTATTTTCTCTTCCTCTAAAAGTGGTTTAAAGTTCAGAAGTCTGAATAAGTTCAACTAGAGagtgactttattcttaatTCTGAATAAAGAAGAACTCTCTTCCAGATATGAATGACTTGATAATCATTATGAAGATAAAGTTGTGATAATAATACCAACAGATCATaacgaaataaaaaaaaaattgtaaagaCACTTTGTAACATATGTTGCcttaattattttattacttgtgtgtaaatattttttttatttggaatttatgttttttttattggagaAGTTTTTTGAGAAAAGCATGTATCATGTCTTTGTTAGGCATTCAAATATGTTATGGTGTCTTTATAGCACATGTGGGCATAATGTCTTTCTTAAAAcaattcttacttattcttataaaataaaatatatttaaaaaaatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU59858 False 653 lncRNA 0.42 2 40932029 40938117
TU59859 False 580 lncRNA 0.34 2 40713681 40933867
TU59861 True 844 lncRNA 0.30 2 40713681 40934131

Neighbor

gene id symbol gene type direction distance location
LOC120557675 LOC107573218 coding upstream 66167 40645188 ~ 40647514 (+)
LOC120557127 NA coding upstream 129976 40554950 ~ 40583705 (+)
LOC120557124 NA coding upstream 267035 39791011 ~ 40446646 (+)
LOC120557118 NA coding upstream 1399999 39294637 ~ 39313682 (+)
LOC120557665 NA coding upstream 1436702 39249166 ~ 39276979 (+)
LOC120557311 NA coding downstream 23591 40961708 ~ 40989920 (+)
LOC120557130 NA coding downstream 420024 41358141 ~ 41360354 (+)
LOC120556884 NA coding downstream 424386 41362503 ~ 41365014 (+)
LOC120557132 NA coding downstream 468426 41406543 ~ 41412621 (+)
LOC120556749 NA coding downstream 687090 41625207 ~ 41628189 (+)
LOC120557700 NA non-coding upstream 57035 40655859 ~ 40656646 (+)
G44634 NA non-coding upstream 86370 40443873 ~ 40627311 (+)
G44633 NA non-coding downstream 11804 40949921 ~ 41025342 (+)
G44751 NA non-coding downstream 107727 41045844 ~ 41077132 (+)
G44757 NA non-coding downstream 366661 41304778 ~ 41305781 (+)
G44758 NA non-coding downstream 367791 41305908 ~ 41306120 (+)
G45095 smpd4 non-coding downstream 443105 41381222 ~ 41387063 (+)
LOC120557687 NA other upstream 44939 40666199 ~ 40668742 (+)
LOC120557674 NA other upstream 165833 40519942 ~ 40547848 (+)
G44690 NA other upstream 207111 40480676 ~ 40506570 (+)
LOC120557692 NA other upstream 207625 40504194 ~ 40506056 (+)
LOC120557666 NA other upstream 282340 40156208 ~ 40431341 (+)
LOC120557139 LOC106956008,LOC103153866,LOC103464266,LOC108411580,LOC102236494 other downstream 812886 41751003 ~ 41768313 (+)
G45186 NA other downstream 931613 41869730 ~ 41880367 (+)
dynlrb1 dynlrb1,LOC106565026 other downstream 958878 41896995 ~ 41902631 (+)
map1lc3a map1lc3a,LOC107551126 other downstream 967412 41905529 ~ 41912117 (+)
G45237 NA other downstream 1340168 42278285 ~ 42301895 (+)

Expression


Co-expression Network