XLOC_005093 (taok2b)


Basic Information

Item Value
gene id XLOC_005093
gene name taok2b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 3789114 ~ 3840664 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00009893
ATGCCGTCGAGTGTGCGGGCTGGGAGTCTCAAGGACCCGGAGGTGGCGGAACTTTTTTACAAGGAGGATCCTGAGAAGCTCTTCACAGACCTGCGTGAGATCGGCCATGGCAGCTTCGGAGCCGTCTACTTTGCCCATGACATCCGCACCAATGAGGTGGTGGCCATCAAGAAGATGTCCTACAGTGGCAAGCAGTCTAATGAGAAATGGCAGGATATTATCAAAGAGGTGAAGTTCCTTCAAAAGCTGCGGCACCCCAACACTGTGGAGTATAGAGGCTGCTACCTGCGCGAACACACAGCATGGCTGGTGATGGAGTACTGTTTGGGCTCTGCCTCGGATTTGCTGGAGGTGCACAAGAAACCATTACAGGAAGTGGAGATAGCAGCAATTACCCATGGTGCATTGCAGGGCTTGGTGTACCTCCACTCGCACAACATGATTCACAGGGATGTGAAAGCAGGGAACATCTTACTGACAGAGCCTGGCCAGGTCAAACTGGGAGACTTCGGATCCGCCTCCATAGTTGCTCCAGCCAACTCATTTGTGGGCACACCTTACTGGATGGCTCCAGAGGTAATTCTCGCCATGGATGAAGGACAGTATGATGGGAAGGTTGACGTGTGGTCACTCGGCATCACCTGCATAGAGCTTGCGGAGAGAAAGCCTCCCTTGTTTAACATGAATGCTATGAGTGCCTTATACCACATCGCCCAGAACGAGAGCCCAGTCCTGCAGTCCAATCACTGGTCAGATTATTTCCGCAACTTCGTAGACTCTTGTCTGCAGAAGATCTCCCAGGACAGACCTACCTCTGATGTGCTGCTTAAACATCACTTTCTGTGCCGCGAGCGTCCGGTGACGGTGGTGATGGATCTGATAGCGCGCACTAAAGACGCCGTGAGGGAGTTGGATAACCTGCAGTATCGCAAAATGAAGAAGATCCTCTTCCAGGAGACGCACAATGGGCCTGCCACCGAGGGCACGGAGGAGGAAGAGGATGTGGAGCAGTACATGTTGCGGACGGGCACCGTGAACAGCATGGAGAGCTCTCATTCACTGCCATCCATGTCTATCAGTGCCAGCTCCCAGAGTTCCTCAGTGAACAGCCTCGCCGATGGGTCAGATGACAGCGGAGAGATGGCCATGATGCAGGAGGGCGAGCACACCGTGACCTCCAACAGCTCTGTGCTGCACAAAGCACTGAATCATGACAACATCTATGACGACCCCTACCAGCCAGAGATGGActcccagcagcagcagcagcagggccCGTCTGGGGGCCGCAGACGCAGAGGACGAGACCACTTCGCCACCATCCGCACGGCCTCTTTGGTAACCCGTCAGATCCAGGAGCACGAACAAGGCTCAGCGCTGAGAGAGCAAATGTCTGGATACAAGCGCATGCGGAGGCAGCATCAGAAGCAGCTGATGGCGCTGGAGAACAAGCTGAAGGCCGAGATGGATGAACATCAGCTCAGGCTCGATAAAGAACTGGAGACGCAGAGGAATAACTTCGGCAGCGAAGCAGACAAGCTCAGCAAGAAGCACCAGGCCATTCTGGAGAAAGAGACGAAAGGTGCTATTGCAGAAGAGAAGAAGTTTCAACAGCATATCTTGGGTCAGCAGAAGAAAGAGTTGACTAGCTTGCTGGAGTCTCAGAAACGCCACTATAGGCAGCGAAAAGAGCAACTGAAAGAGGAACTCAATGAGAACCAGTCAACGCCAAAACGAGAGAAGCAGGAGTGGCTTGTTCAACAGAAGGAGTGTCTCCAACAGGTCCAGGCAGAGGAAGAGGCAGGGTTACTGCGCAGGCAGAGGCAATACTATGAACTGCAGGGACGCCAGTATAAGAGGAAGATGCTGCTGTCACGTCACAACCTGGAGCAAGACCTGCTCAGAGAGGACCTGAACAAGAAACAGACATTGAAGGACCTGGAATGTGCCATGTTGCTCCGCCATCATGAGTCAACTCAGGAGCTGGAGTTCAGACAGCTGGCTCTAGTGCAGCGCACACGGGCTGACCTGATCCGCACACAGCATCAGACCGAACTCACCAACCAGATGGAGTATAACAAACGGCGTGAGCAAGAGCTGCGGCAAAAGCACGCTGTTGAAGTCCGCCAGCAGCCCAAGAGCCTGAGATCTAAAGAGCTTCAGATCAAGCGTCAGTTCCAGGACACGTGCAAGATCCAAACGCGTCAGTATAAAGCTCTGAGGAACCACCTGCTGGAGAACACGCCCAAGTCGGACCACAAGGCTGTGCTGAAGCGTCTGAAAGATGAGCAGACCCGCAAGCTGGCTATCCTGGCCGAGCAGTACGACCACTCCATCAACGACATGCTGTCCACACAGGCTCTGCGCCTGGACGAGACGCAGGAGGCCGAGTATCAGGTGCTGAGGATGCAGCTGCAGCAGGAGCTGGAGCTGCTGAATGCGTACCAGAGCAAGATCAAGATGCACACGGACACCCAACACGAGAGGGAGGGCAAAGACCTGGAACAGAGGGTGTCCATCCGCAGAGCCCTTCTGGAACAGCGGATCGAGGAGGAGATGCTCGCCCTGCAGAACGAGCGTTCGGAGCGCATCCGTTCCCTCCTGGAGCGCCAGGCGTCTGAAATCGAGGCCTTTGACTCGGAGAGCCTCCGCTTGGGCTTCAGCAGCCTTGCTCTGACAGGCATCCCCTCCGAGGCTCACCCCAAGCAGGGCTACCCGTCCAGCCAGACGCCCCGTCCGTCAGGCCACTGGAGTCACGGCGGCGGGCCGCACCCTCACCCCCGCAGGGGTCCCAGCAGAGCCGAGTCCACCTCCTCGTCCTCGGTGTCCCACGCTTTGGGATTAGCACGAGACGGGCCTCTCCACCACTCCTCCcgctcctcctcctcatcatcatcctcctcttCATCCTCCCATCACAACCGGCACCACCTTCCCCAGCACTACCATCACCAGAGCACGCCGCAGCTGTACCGGGACAGAGAGCGGGAACGAGAGAGGGAGCGGGAGAAGGAGAAGGAGTGGGGCGGAGGCGGGAGCAGGGCGGACCACCCTCACCTCTTCCCCCACCACCTTCCCTCCCGCTCCTCCTCCCAATCCCTCGCTCTcctccctcctcctcctcccgcACCCATGCTTTCGGCGTCCTCCGCCCAGTCCTCGGGCTCCCAAGGAGTCTACGGAGGAGGCGGAGGAGGCCTGGTGGTGCGGGGGCCCAGTCTGATGGCGCTGAGGAACAGCCCGCAGCCCCTGCGCAGAACCGCGTCCGGCGGCCCGGGAGCCCCAGCTGGAGCAGACGGAGTCCTCAGTCGGAGCACTTCCGTCACCTCGCACATCTCCAACGGGTCACACCTCTCCTACTCTTAA
>TCONS_00009894
TCGGCACCCGCCCCGCTCCGCCATCATTAAGTCCTGAACAAAAAGCGAATGAGACAGGAAAAGAAAAACAGGGATGGACCCGTCGATGACAGAAAGAGGCGAACCGAGCGCACGACACCGACGGCATGACAAGAAAATGATGAAAACACGCGCGGCGGAGGCGGAATTTCGGACCGTGATTTAAAAGTGTTCGTTGTGCTTGACAGTCAGCTGATCCGAGTCCGTTAACGGTTAACGGCAGTATTATTCCTACGTTTCATCAGCACATTATCGGACCCAATACGTTAGAAATAGATGGATCGCTATCCGGATCGATCGCTTTTTGTGAAGTGAAACGGCGGAGAAGAGGCCAGATTTTCCTCTGCAGGCCAGGAGCTAGCTGACTCAAGCTAGCTACAGTGGATCCCATAAACCACGGCGCTGGCCATGCCGTCGAGTGTGCGGGCTGGGAGTCTCAAGGACCCGGAGGTGGCGGAACTTTTTTACAAGGAGGATCCTGAGAAGCTCTTCACAGACCTGCGTGAGATCGGCCATGGCAGCTTCGGAGCCGTCTACTTTGCCCATGACATCCGCACCAATGAGGTGGTGGCCATCAAGAAGATGTCCTACAGTGGCAAGCAGTCTAATGAGAAATGGCAGGATATTATCAAAGAGGTGAAGTTCCTTCAAAAGCTGCGGCACCCCAACACTGTGGAGTATAGAGGCTGCTACCTGCGCGAACACACAGCATGGCTGGTGATGGAGTACTGTTTGGGCTCTGCCTCGGATTTGCTGGAGGTGCACAAGAAACCATTACAGGAAGTGGAGATAGCAGCAATTACCCATGGTGCATTGCAGGGCTTGGTGTACCTCCACTCGCACAACATGATTCACAGGGATGTGAAAGCAGGGAACATCTTACTGACAGAGCCTGGCCAGGTCAAACTGGGAGACTTCGGATCCGCCTCCATAGTTGCTCCAGCCAACTCATTTGTGGGCACACCTTACTGGATGGCTCCAGAGGTAATTCTCGCCATGGATGAAGGACAGTATGATGGGAAGGTTGACGTGTGGTCACTCGGCATCACCTGCATAGAGCTTGCGGAGAGAAAGCCTCCCTTGTTTAACATGAATGCTATGAGTGCCTTATACCACATCGCCCAGAACGAGAGCCCAGTCCTGCAGTCCAATCACTGGTCAGATTATTTCCGCAACTTCGTAGACTCTTGTCTGCAGAAGATCTCCCAGGACAGACCTACCTCTGATGTGCTGCTTAAACATCACTTTCTGTGCCGCGAGCGTCCGGTGACGGTGGTGATGGATCTGATAGCGCGCACTAAAGACGCCGTGAGGGAGTTGGATAACCTGCAGTATCGCAAAATGAAGAAGATCCTCTTCCAGGAGACGCACAATGGGCCTGCCACCGAGGGCACGGAGGAGGAAGAGGATGTGGAGCAGTACATGTTGCGGACGGGCACCGTGAACAGCATGGAGAGCTCTCATTCACTGCCATCCATGTCTATCAGTGCCAGCTCCCAGAGTTCCTCAGTGAACAGCCTCGCCGATGGGTCAGATGACAGCGGAGAGATGGCCATGATGCAGGAGGGCGAGCACACCGTGACCTCCAACAGCTCTGTGCTGCACAAAGCACTGAATCATGACAACATCTATGACGACCCCTACCAGCCAGAGATGGActcccagcagcagcagcagcagggccCGTCTGGGGGCCGCAGACGCAGAGGACGAGACCACTTCGCCACCATCCGCACGGCCTCTTTGGTAACCCGTCAGATCCAGGAGCACGAACAAGGCTCAGCGCTGAGAGAGCAAATGTCTGGATACAAGCGCATGCGGAGGCAGCATCAGAAGCAGCTGATGGCGCTGGAGAACAAGCTGAAGGCCGAGATGGATGAACATCAGCTCAGGCTCGATAAAGAACTGGAGACGCAGAGGAATAACTTCGGCAGCGAAGCAGACAAGCTCAGCAAGAAGCACCAGGCCATTCTGGAGAAAGAGGTAAGTGCTATTGCAGAAGAGAAGAAGTTTCAACAGCATATCTTGGGTCAGCAGAAGAAAGAGTTGACTAGCTTGCTGGAGTCTCAGAAACGCCACTATAGGCAGCGAAAAGAGCAACTGAAAGAGGAACTCAATGAGAACCAGTCAACGCCAAAACGAGAGAAGCAGGAGTGGCTTGTTCAACAGAAGGAGTGTCTCCAACAGGTCCAGGCAGAGGAAGAGGCAGGGTTACTGCGCAGGCAGAGGCAATACTATGAACTGCAGGGACGCCAGTATAAGAGGAAGATGCTGCTGTCACGTCACAACCTGGAGCAAGACCTGCTCAGAGAGGACCTGAACAAGAAACAGACATTGAAGGACCTGGAATGTGCCATGTTGCTCCGCCATCATGAGTCAACTCAGGAGCTGGAGTTCAGACAGCTGGCTCTAGTGCAGCGCACACGGGCTGACCTGATCCGCACACAGCATCAGACCGAACTCACCAACCAGATGGAGTATAACAAACGGCGTGAGCAAGAGCTGCGGCAAAAGCACGCTGTTGAAGTCCGCCAGCAGCCCAAGAGCCTGAGATCTAAAGAGCTTCAGATCAAGCGTCAGTTCCAGGACACGTGCAAGATCCAAACGCGTCAGTATAAAGCTCTGAGGAACCACCTGCTGGAGAACACGCCCAAGTCGGACCACAAGGCTGTGCTGAAGCGTCTGAAAGATGAGCAGACCCGCAAGCTGGCTATCCTGGCCGAGCAGTACGACCACTCCATCAACGACATGCTGTCCACACAGGCTCTGCGCCTGGACGAGACGCAGGAGGCCGAGTATCAGGTGCTGAGGATGCAGCTGCAGCAGGAGCTGGAGCTGCTGAATGCGTACCAGAGCAAGATCAAGATGCACACGGACACCCAACACGAGAGGGAGGGCAAAGACCTGGAACAGAGGGTGTCCATCCGCAGAGCCCTTCTGGAACAGCGGATCGAGGAGGAGATGCTCGCCCTGCAGAACGAGCGTTCGGAGCGCATCCGTTCCCTCCTGGAGCGCCAGGCGTCTGAAATCGAGGCCTTTGACTCGGAGAGCCTCCGCTTGGGCTTCAGCAGCCTTGCTCTGACAGGCATCCCCTCCGAGGCTCACCCCAAGCAGGGCTACCCGTCCAGCCAGACGCCCCGTCCGTCAGGCCACTGGAGTCACGGCGGCGGGCCGCACCCTCACCCCCGCAGGGGTCCCAGCAGAGCCGAGTCCACCTCCTCGTCCTCGGTGTCCCACGCTTTGGGATTAGCACGAGACGGGCCTCTCCACCACTCCTCCcgctcctcctcctcatcatcatcctcctcttCATCCTCCCATCACAACCGGCACCACCTTCCCCAGCACTACCATCACCAGAGCACGCCGCAGCTGTACCGGGACAGAGAGCGGGAACGAGAGAGGGAGCGGGAGAAGGAGAAGGAGTGGGGCGGAGGCGGGAGCAGGGCGGACCACCCTCACCTCTTCCCCCACCACCTTCCCTCCCGCTCCTCCTCCCAATCCCTCGCTCTcctccctcctcctcctcccgcACCCATGCTTTCGGCGTCCTCCGCCCAGTCCTCGGGCTCCCAAGGAGTCTACGGAGGAGGCGGAGGAGGCCTGGTGGTGCGGGGGCCCAGTCTGATGGCGCTGAGGAACAGCCCGCAGCCCCTGCGCAGAACCGCGTCCGGCGGCCCGGGAGCCCCAGCTGGAGCAGACGGAGTCCTCAGTCGGAGCACTTCCGTCACCTCGCACATCTCCAACGGGTCACACCTCTCCTACTCTTAA
>TCONS_00009895
CAAAACGAGAGAAGCAGGAGTGGCTTGTTCAACAGAAGGAGTGTCTCCAACAGGTCCAGGCAGAGGAAGAGGCAGGGTTACTGCGCAGGCAGAGGCAATACTATGAACTGCAGGGACGCCAGTATAAGAGGAAGATGCTGCTGTCACGTCACAACCTGGAGCAAGACCTGCTCAGAGAGGACCTGAACAAGAAACAGACATTGAAGGACCTGGAATGTGCCATGTTGCTCCGCCATCATGAGTCAACTCAGGAGCTGGAGTTCAGACAGCTGGCTCTAGTGCAGCGCACACGGGCTGACCTGATCCGCACACAGCATCAGACCGAACTCACCAACCAGATGGAGTATAACAAACGGCGTGAGCAAGAGCTGCGGCAAAAGCACGCTGTTGAAGTCCGCCAGCAGCCCAAGAGCCTGAGAGTGAGTGACTCAGACATCACAGAGAATACCACAGAAGGGGCGGGGCTTGATATTGAAGGGGTTGAGCCACAGGATGAAGAGAAGAGGGATGGAGAAAAGATAGATGGGGATGAGATGCAGCCTTTAGGTGCTGTTGAAGAGACGTCTGAGCAAGAGATGAGGGAAGTAAATGTTCTTGAGG

Function

symbol description
taok2b Predicted to enable protein serine/threonine kinase activity. Acts upstream of or within midbrain development. Predicted to be active in cytoplasm. Is expressed in brain. Orthologous to human TAOK2 (TAO kinase 2).

GO:

id name namespace
GO:0048812 neuron projection morphogenesis biological_process
GO:0023014 signal transduction by protein phosphorylation biological_process
GO:0032147 activation of protein kinase activity biological_process
GO:0000165 MAPK cascade biological_process
GO:0006468 protein phosphorylation biological_process
GO:0031098 stress-activated protein kinase signaling cascade biological_process
GO:0030901 midbrain development biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-110603-3 Predicted to enable protein serine/threonine kinase activity. Acts upstream of or within midbrain development. Predicted to be active in cytoplasm. Is expressed in brain. Orthologous to human TAOK2 (TAO kinase 2).

Ensembl:

ensembl_id ENSDARG00000100620

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00009893 False 3366 mRNA 0.57 18 3789114 3828854
TCONS_00009894 False 3789 mRNA 0.57 19 3789114 3840664
TCONS_00009895 True 600 lncRNA 0.53 2 3805655 3806820

Neighbor

gene id symbol gene type direction distance location
XLOC_005092 NA coding downstream 2732 3782621 ~ 3786382 (-)
XLOC_005091 MAZ coding downstream 10266 3766557 ~ 3778848 (-)
XLOC_005090 tlcd3bb coding downstream 32709 3740605 ~ 3756405 (-)
XLOC_005089 vps25 coding downstream 67157 3714076 ~ 3721957 (-)
XLOC_005088 CABZ01069040.1 coding downstream 83252 3652015 ~ 3705862 (-)
XLOC_005094 NA coding upstream 19800 3860464 ~ 3865234 (-)
XLOC_005095 gdpd3b coding upstream 52368 3893032 ~ 3904011 (-)
XLOC_005096 zgc:92040 coding upstream 85504 3926168 ~ 3940768 (-)
XLOC_005097 eif3c coding upstream 103565 3944229 ~ 3962372 (-)
XLOC_005098 ppp4cb coding upstream 123687 3964351 ~ 3978342 (-)
XLOC_005087 NA non-coding downstream 219033 3569747 ~ 3570081 (-)
XLOC_005086 NA non-coding downstream 245098 3519168 ~ 3544016 (-)
XLOC_005083 NA non-coding downstream 504205 3281756 ~ 3284909 (-)
XLOC_005073 NA non-coding downstream 1044473 2703355 ~ 2744641 (-)
XLOC_005102 NA non-coding upstream 249073 4089737 ~ 4129820 (-)
XLOC_005103 NA non-coding upstream 302930 4143594 ~ 4169699 (-)
XLOC_005105 NA non-coding upstream 349358 4190022 ~ 4194304 (-)
XLOC_005109 NA non-coding upstream 391193 4231857 ~ 4232505 (-)

Expression


Co-expression Network