G45190


Basic Information

Item Value
gene id G45190
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 41912164 ~ 41915303 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU60469
TCGAGGGGAAAAGAGGCCACTGGGTGTCAAAACCGACCCCAAACTACAAAAAAACCCCGCCACGATCCGCTCAGCTTTGTTGCACGTAGTCATGTGACAagatgcctctctctctctctctctctctctctctctctctctctctctctctctccatcataGTCGAGCATCCTCGTCATATTGGTCAGTACAAAACTAGCTACAAAAAGCCAGAGGACgtccccgtgtgtgtgtgtgtgtgtctgtgtgtctttcctGCCCTCAGTTAGAAGTCCGACTCATAACATGTGATAGTCTAGTTGggattttgtctctttttgttccCACGGGCTTTTATTATTGGGACAAACAAAGCGACGACGTTGGGAGTTTGAAAAATCGGGCGAGCAAAAATAGATAATTTTTTCATTCAACCTCGACACTAAACGTACATACAGAGTTCAACTTGAAAGAAAAGTCGCATTGGGACGCGAGTCTGAGTAGAGGATGTATGAAGTCGAGTTCCGACCCTCGGATACGTTCACGTCACGCAGGTGAACGCACGGCGGAGAGTTAacgttacaccagcaatctgccGCAGCAGTTTCTATTCTCGTCTACAGGCTAGAAGATAAGATGAGCTAGGTAGTGATTGTTAccttctttttgtgtttttttttaaatggtcttttgtttgagatgtttagtttaggtttagtttagtttgtgtTCTGCAGCTTGTTCCGAGTTCACTTTTCGATGATTTTTTAATCGTCCGTTTACCGTCAGCCTGAAGCTCAACTCGCCACTGGCTACCGGGTAGCTGACCATCGGGCTAAAAATGACTGTAAATGCTCTGTAATAATTAACAGCGTTCAGTCGTTTCACACGTGCAATATTTCTCCCGTCACGCCTCGCACCGCCGTCGCAGGTTtccacacttttaaaaaaaacactaaaagtaGACACTGCAGCTGTAACGTAACGCACCGCTCGGTCACAGAAGGgaagttagcattagcatcacGAACCACAACGCGCCGCTGCTACGTGCCACTAGGCAGGTAAACAGCCGCGATGACtggactgtctgtctgtcccgtTAAGCACAAAACGCCGGTAGTATCGCTACTCGCCTGTAGCGTCACTACTACTCGCCTGTAGCATCACTACTCGCCTGTAGCATCACTACTCGCCTGTAGCATCACTACTCGCCTGTAGCGTCACTACTACCGCCTGTAGCATCACTACCTAGTCACCATACCGCCTGTAGCATCACTACTCGCCTGTAGCATCACTACTCGCCTGTAGCATCACTACTCGCCTGTAGCATCACTACTCGCCTGTAGCATCACTACTCGCCTGTAGCATCACTACTCGCCTGTAGCATCACTACTCGCCTGTAGCATCACTACTCGCCTGTCTCCCCCACATTTAACCGCACGTCCACGTAATTTAAGTCAGGTGCAGCAGATTTAAGTTTAGGTCGCAGAAACCCGAGACGTGCACACTGTTCCAACAGTCGTACAGTTAAAGACTCGAGGGGgagttagggctgcaactaacggttATTCTCTGGATGAATGGACGAGTTGTTTGGgctcaaaaatgtcagaaaatgtttcTCAACAGTCCCGagacgacgtcctcaaatgtctcggttttgttccacaactcaaagatattcagttcactgtcccagaggagagaagacactagaacatattcacatttaacaaagcTGACATCATTTtatcgttaaaaaaaatgactcaaaccgattgtccgaatagttggcgattcatttaacagttgacaactaatcgctGAATCTCTTCAGCTCTACACAGGAGTTATGTTTTTAAACACAACATGGAGGATGTGAGAATTATTAGGAAGACGATCTAGCTTGGAACTGAAACCGTCAGTTTGGGTTAGCAGCACAGGAGGAGGGGGACACCGAAATAAAATAGTTACAAAGCTAAAAAGGTTGAAAATCCTTTCCCCCGTCTTCTTCCGTTCTCACGTGTCACGGTAGCATTAGACAAaaatcaaatgtatttaatGTCTGAAACGAATGAGCTTCTTTTGCACATAAATTAATACAAATATGAAAGAGTTGGCATAGGATTTTTTTAGGAATTACTGTATCTATATATAAcaattttctcttctttttttgtatctgCTCCTGTTCTCTAgagcgctgctgctgctctgtgtctgcctttgttttaataaaacttTAAGATTGTGATGCCCTGCAAACCTTGCATGTTttagcttttttgttttttcttctttcttttttttaatatgtatatTGATTTTATGCAGTAGTtataattgtattgtttaatttagaGAAACATGGAGTCTTTTTAGATGTTTTTCCCAAAaccaaaaactgaaaatatgtgtatgtttgaaacaaaaaaaactaaaacaaaaaaatgtgtgcGTATAAACGATCATATATTCAAACtgtattacattttctttttggcATTTCTGACGTTGACAGTGTTCGGaggggtgtgtgtatatatagatgCATTGCTGCAAACTTATTCAAAGCATTtgccaataaataaataaaaagttgcctttaaaatgtgtgtgtgtgtgtgcgctcattCTATGTTCATGTACATTTCCTGCTTTGTTTAATGAGGTCTAGTATTAAGAGCTGACTGCGGTCAAGCTAACCGTATATCCCATCTCCGTGGTTAAACCAGCTCccttcatctaaatactttgtct
>TU60470
TCGAGGGGAAAAGAGGCCACTGGGTGTCAAAACCGACCCCAAACTACAAAAAAACCCCGCCACGATCCGCTCAGCTTTGTTGCACGTAGTCATGTGACAagatgcctctctctctctctctctctctctctctctctctctctctctctctctccatcataGTCGAGCATCCTCGTCATATTGGTCAGTACAAAACTAGCTACAAAAAGCCAGAGGACgtccccgtgtgtgtgtgtgtgtgtctgtgtgtctttcctGCCCTCAGTTAGAAGTCCGACTCATAACATGTGATAGTCTAGTTGggattttgtctctttttgttccCACGGGCTTTTATTATTGGGACAAACAAAGCGACGACGTTGGGAGTTTGAAAAATCGGGCGAGCAAAAATAGATAATTTTTTCATTCAACCTCGACACTAAACGTACATACAGAGTTCAACTTGAAAGAAAAGTCGCATTGGGACGCGAGTCTGAGTAGAGGATGTATGAAGTCGAGTTCCGACCCTCGGATACGTTCACGTCACGCAGGTGAACGCACGGCGGAGAGTTAacgttacaccagcaatctgccGCAGCAGTTTCTATTCTCGTCTACAGGCTAGAAGATAAGATGAGCTAGGTAGTGATTGTTAccttctttttgtgtttttttttaaatggtcttttgtttgagatgtttagtttaggtttagtttagtttgtgtTCTGCAGCTTGTTCCGAGTTCACTTTTCGATGATTTTTTAATCGTCCGTTTACCGTCAGCCTGAAGCTCAACTCGCCACTGGCTACCGGGTAGCTGACCATCGGGCTAAAAATGACTGTAAATGCTCTGTAATAATTAACAGCGTTCAGTCGTTTCACACGTGCAATATTTCTCCCGTCACGCCTCGCACCGCCGTCGCAGGTTtccacacttttaaaaaaaacactaaaagtaGACACTGCAGCTGTAACGTAACGCACCGCTCGGTCACAGAAGGgaagttagcattagcatcacGAACCACAACGCGCCGCTGCTACGTGCCACTAGGCAGGTAAACAGCCGCGATGACtggactgtctgtctgtcccgtTAAGCACAAAACGCCGGTAGTATCGCTACTCGCCTGTAGCGTCACTACTACTCGCCTGTAGCGTCACTGCTACTCGCCTGTAGCGTCACTGCTACTCGCCTGTAGCGTCACTGCTACTCGCCTGTAGCGTCACTACTACTCGCCTGTAGCGTCACTACTACTCGCCTGTAGCATCACTACTCGCCTGTAGCGTCACTACTACTCGCCTGTAGCATCACTACTCGCCTGTAGCATCACTACTCGCCTGTAGCATCACTACTCGCCTGTCTCCCCCACATTTAACCGCACGTCCACGTAATTTAAGTCAGGTGCAGCAGATTTAAGTTTAGGTCGCAGAAACCCGAGACGTGCACACTGTTCCAACAGTCGTACAGTTAAAGACTCGAGGGGgagttagggctgcaactaacggttATTCTCTGGATGAATGGACGAGTTGTTTGGgctcaaaaatgtcagaaaatgtttcTCAACAGTCCCGagacgacgtcctcaaatgtctcggttttgttccacaactcaaagatattcagttcactgtcccagaggagagaagacactagaacatattcacatttaacaaagcTGACATCATTTtatcgttaaaaaaaatgactcaaaccgattgtccgaatagttggcgattcatttaacagttgacaactaatcgctGAATCTCTTCAGCTCTACACAGGAGTTATGTTTTTAAACACAACATGGAGGATGTGAGAATTATTAGGAAGACGATCTAGCTTGGAACTGAAACCGTCAGTTTGGGTTAGCAGCACAGGAGGAGGGGGACACCGAAATAAAATAGTTACAAAGCTAAAAAGGTTGAAAATCCTTTCCCCCGTCTTCTTCCGTTCTCACGTGTCACGGTAGCATTAGACAAaaatcaaatgtatttaatGTCTGAAACGAATGAGCTTCTTTTGCACATAAATTAATACAAATATGAAAGAGTTGGCATAGGATTTTTTTAGGAATTACTGTATCTATATATAAcaattttctcttctttttttgtatctgCTCCTGTTCTCTAgagcgctgctgctgctctgtgtctgcctttgttttaataaaacttTAAGATTGTGATGCCCTGCAAACCTTGCATGTTttagcttttttgttttttcttctttcttttttttaatatgtatatTGATTTTATGCAGTAGTtataattgtattgtttaatttagaGAAACATGGAGTCTTTTTAGATGTTTTTCCCAAAaccaaaaactgaaaatatgtgtatgtttgaaacaaaaaaaactaaaacaaaaaaatgtgtgcGTATAAACGATCATATATTCAAACtgtattacattttctttttggcATTTCTGACGTTGACAGTGTTCGGaggggtgtgtgtatatatagatgCATTGCTGCAAACTTATTCAAAGCATTtgccaataaataaataaaaagttgcctttaaaatgtgtgtgtgtgtgtgcgctcattCTATGTTCATGTACATTTCCTGCTTTGTTTAATGAGGTCTAGTATTAAGAGCTGACTGCGGTCAAGCTAACCGTATATCCCATCTCCGTGGTTAAACCAGCTCccttcatctaaatactttgtct
>TU60471
TCGAGGGGAAAAGAGGCCACTGGGTGTCAAAACCGACCCCAAACTACAAAAAAACCCCGCCACGATCCGCTCAGCTTTGTTGCACGTAGTCATGTGACAagatgcctctctctctctctctctctctctctctctctctctctctctctctctccatcataGTCGAGCATCCTCGTCATATTGGTCAGTACAAAACTAGCTACAAAAAGCCAGAGGACgtccccgtgtgtgtgtgtgtgtgtctgtgtgtctttcctGCCCTCAGTTAGAAGTCCGACTCATAACATGTGATAGTCTAGTTGggattttgtctctttttgttccCACGGGCTTTTATTATTGGGACAAACAAAGCGACGACGTTGGGAGTTTGAAAAATCGGGCGAGCAAAAATAGATAATTTTTTCATTCAACCTCGACACTAAACGTACATACAGAGTTCAACTTGAAAGAAAAGTCGCATTGGGACGCGAGTCTGAGTAGAGGATGTATGAAGTCGAGTTCCGACCCTCGGATACGTTCACGTCACGCAGGTGAACGCACGGCGGAGAGTTAacgttacaccagcaatctgccGCAGCAGTTTCTATTCTCGTCTACAGGCTAGAAGATAAGATGAGCTAGGTAGTGATTGTTAccttctttttgtgtttttttttaaatggtcttttgtttgagatgtttagtttaggtttagtttagtttgtgtTCTGCAGCTTGTTCCGAGTTCACTTTTCGATGATTTTTTAATCGTCCGTTTACCGTCAGCCTGAAGCTCAACTCGCCACTGGCTACCGGGTAGCTGACCATCGGGCTAAAAATGACTGTAAATGCTCTGTAATAATTAACAGCGTTCAGTCGTTTCACACGTGCAATATTTCTCCCGTCACGCCTCGCACCGCCGTCGCAGGTTtccacacttttaaaaaaaacactaaaagtaGACACTGCAGCTGTAACGTAACGCACCGCTCGGTCACAGAAGGgaagttagcattagcatcacGAACCACAACGCGCCGCTGCTACGTGCCACTAGGCAGGTAAACAGCCGCGATGACtggactgtctgtctgtcccgtTAAGCACAAAACGCCGGTAGTATCGCTACTCGCCTGTAGCGTCACTACTACTCGCCTGTAGCGTCACTGCTACTCGCCTGTAGCGTCACTGCTACTCGCCTGTAGCGTCACTGCTACTCGCCTGTAGCGTCACTACTACTCGCCTGTAGCGTCACTACTCGCCTGTAGCATCACTGCTACTCGCCTGTAGCGTCACTACTACCTGTAGCGTCACTACTACTCGCCTGTAGCATCACTACTCACCTGTAGCGCCACTACTACTCGCCTGTAGCGTCACTACTACTCGCCTGTAGCATCACTACTCGCCTGTAGCGTCACTACTACTCGCCTGTAGCATCACTACTCACCTGTAGCATCACTACCGCTCGCCTGTAGCATCACTACTCGCCTGTAGCGTCACTACTACTCGCCTGTAGCATCACTACTCGCCTGTAGCATCACTACTCGCCTGTAGCATCACTACTCGCCTGTCTCCCCCACATTTAACCGCACGTCCACGTAATTTAAGTCAGGTGCAGCAGATTTAAGTTTAGGTCGCAGAAACCCGAGACGTGCACACTGTTCCAACAGTCGTACAGTTAAAGACTCGAGGGGgagttagggctgcaactaacggttATTCTCTGGATGAATGGACGAGTTGTTTGGgctcaaaaatgtcagaaaatgtttcTCAACAGTCCCGagacgacgtcctcaaatgtctcggttttgttccacaactcaaagatattcagttcactgtcccagaggagagaagacactagaacatattcacatttaacaaagcTGACATCATTTtatcgttaaaaaaaatgactcaaaccgattgtccgaatagttggcgattcatttaacagttgacaactaatcgctGAATCTCTTCAGCTCTACACAGGAGTTATGTTTTTAAACACAACATGGAGGATGTGAGAATTATTAGGAAGACGATCTAGCTTGGAACTGAAACCGTCAGTTTGGGTTAGCAGCACAGGAGGAGGGGGACACCGAAATAAAATAGTTACAAAGCTAAAAAGGTTGAAAATCCTTTCCCCCGTCTTCTTCCGTTCTCACGTGTCACGGTAGCATTAGACAAaaatcaaatgtatttaatGTCTGAAACGAATGAGCTTCTTTTGCACATAAATTAATACAAATATGAAAGAGTTGGCATAGGATTTTTTTAGGAATTACTGTATCTATATATAAcaattttctcttctttttttgtatctgCTCCTGTTCTCTAgagcgctgctgctgctctgtgtctgcctttgttttaataaaacttTAAGATTGTGATGCCCTGCAAACCTTGCATGTTttagcttttttgttttttcttctttcttttttttaatatgtatatTGATTTTATGCAGTAGTtataattgtattgtttaatttagaGAAACATGGAGTCTTTTTAGATGTTTTTCCCAAAaccaaaaactgaaaatatgtgtatgtttgaaacaaaaaaaactaaaacaaaaaaatgtgtgcGTATAAACGATCATATATTCAAACtgtattacattttctttttggcATTTCTGACGTTGACAGTGTTCGGaggggtgtgtgtatatatagatgCATTGCTGCAAACTTATTCAAAGCATTtgccaataaataaataaaaagttgcctttaaaatgtgtgtgtgtgtgtgcgctcattCTATGTTCATGTACATTTCCTGCTTTGTTTAATGAGGTCTAGTATTAAGAGCTGACTGCGGTCAAGCTAACCGTATATCCCATCTCCGTGGTTAAACCAGCTCccttcatctaaatactttgtct

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0043169 cation binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU60469 False 2742 lncRNA 0.43 2 41912164 41915303
TU60470 False 2689 lncRNA 0.43 3 41912164 41915303
TU60471 True 2893 lncRNA 0.43 4 41912164 41915303

Neighbor

gene id symbol gene type direction distance location
LOC120557138 NA coding upstream 169007 41739325 ~ 41743157 (+)
LOC120556749 NA coding upstream 283975 41625207 ~ 41628189 (+)
LOC120557132 NA coding upstream 499543 41406543 ~ 41412621 (+)
LOC120556884 NA coding upstream 547150 41362503 ~ 41365014 (+)
LOC120557130 NA coding upstream 551810 41358141 ~ 41360354 (+)
LOC120556746 LOC106676760 coding downstream 42990 41958293 ~ 41961170 (+)
LOC120556737 NA coding downstream 48061 41963364 ~ 41987577 (+)
LOC120556739 NA coding downstream 76104 41991407 ~ 41998401 (+)
LOC120556738 LOC106676760 coding downstream 93149 42008452 ~ 42012332 (+)
LOC120556744 NA coding downstream 97645 42012948 ~ 42014554 (+)
G45193 NA non-coding upstream 53878 41855660 ~ 41858286 (+)
G45174 NA non-coding upstream 209087 41702634 ~ 41703077 (+)
G45119 LOC106676758 non-coding upstream 411073 41487332 ~ 41501091 (+)
G45095 smpd4 non-coding upstream 525101 41381222 ~ 41387063 (+)
G44758 NA non-coding upstream 606044 41305908 ~ 41306120 (+)
LOC120556755 NA non-coding downstream 23911 41939214 ~ 41957098 (+)
G45229 NA non-coding downstream 252574 42167877 ~ 42170069 (+)
G45245 NA non-coding downstream 433951 42349254 ~ 42350755 (+)
G45247 NA non-coding downstream 496902 42412205 ~ 42412427 (+)
G45248 NA non-coding downstream 506305 42421608 ~ 42429476 (+)
map1lc3a map1lc3a,LOC107551126 other upstream 47 41905529 ~ 41912117 (+)
dynlrb1 dynlrb1,LOC106565026 other upstream 9533 41896995 ~ 41902631 (+)
G45186 NA other upstream 31797 41869730 ~ 41880367 (+)
LOC120557139 LOC106956008,LOC103153866,LOC103464266,LOC108411580,LOC102236494 other upstream 143851 41751003 ~ 41768313 (+)
LOC120557312 NA other upstream 980781 40848815 ~ 40931383 (+)
G45237 NA other downstream 362982 42278285 ~ 42301895 (+)
rbm15b rbm15b,LOC102788268 other downstream 739485 42654788 ~ 42658388 (+)
G45557 NA other downstream 1923081 43838384 ~ 43838852 (+)
G45577 NA other downstream 2041524 43956827 ~ 43957173 (+)
G45635 NA other downstream 2445483 44360786 ~ 44468991 (+)

Expression


Co-expression Network