G45229


Basic Information

Item Value
gene id G45229
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 42167877 ~ 42170069 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU60527
TTGAGTTCAACTTCTTTTATTAAATCCTATTAAAGTGTTACAAATTAAGACCTTTTAAACACAGAACGTTCACATTATCCAGTCGATAACacattgtaaaaaacaaaactttaaagAAAGGTTTCTTTAATAACCCATATTCCTGACAGTCCATTCATTTTACTATGTACAAAGTAATATACATAAACCCAAATTCCTGACAGTACGTTCATGTATTATGTACAACGTAATATACATTagtcagacaaacatgcaacaaGGATTGAAGCCATGTGTGCAAATTATCCGGCTGATTgtaaagacaaaacacacaaaatcacGTATATTAAAATAATAGTTCACTGTGAATCGTTATTGCTTATCTGAATCTGAACAGTAGAAATCAGTTTCGATGGCTGCTGCTCCACGCTGAGGAGGAAGGATTTGAAATCTTTCCGCACAACCCAAAAtataacaaagaaaacaaacaaaaaatacaataataactTGTTTTAACTAACAGACTATATACAAATCTACATAGGGGAAAAgaatgccatttaaaaaaaaagtacaatataagGAATCAATCCTCTTATGAAGAAACGTATTTCATGGGCACGATAGCACGGTCAAATTTTAATTCTTTCAACAGACATACCCAGAACTGTCTTGTTTCTCTCATCTGCTGTTGAACCACATGGTTGCGTCTGAAATCCCCTCCTCTGAACTACGTACTCAACACGTAAACTATCGCTCAACAtacttttgtgtaaataaacagtagtgtCTTTTAGTTTGCACGTACAGCATGTGTGTACACACGGGAGAATATATTGGAGGCACGTTCGTGAGTCTGCCCTCTCATTGGCTACCGCTCTCCCAAAGTGCCGCCAACATCCGGGCACTTTCGCAGATTTTGCTCGCACCGCTGTTCTCATAGAGAATCAACTGAATCGCTCCGCTCTGCCGTTATTTCAGCTGCCTGTGGAAACCCAGCGTAATGAGATACAGCACCTGCTTCTTCCTCTTCTATCTACAATGGCTCCGTTCCCTGTAGTAGGGGCAGCAGTTTCAGATATTAACACTTATTTAAAGTCACTGGAGATGTTAAGGTTTGTCTGTGATGCGATtgttaaaggggcgctatgcagtttttgacatttttcgtTCGTTCTTTTTTTGCTTTTTGCTAAccggtttctctatagagccccccctacagctTGTATGTAACTTGTATCTTAcatacccggctcacagtcacctgtaTCTTATTATATCCTCTCTCGTTAAGTCTGcagtttcctctttctttgttcctccgacaatgctttcctagctttcggcttcttttttgccggctcagccatgacgaaaaactccatcgctaccttgttagccggttcctgaatggcgGCGTGTATGTGTTCAGTGCCGTGAAGCTATtagttacatcgcgagacctgatatcacgccatacgtcctgacgctgaggccggcagcttgttgcaagggtggtttcttccgctcacaggcgctagggggaagtgAGACAACCTCCATTAAACCCCAAAAAGtgatataaccattccaatgactccaaagctgttcagttaaggtaaattaagcttaaaaaaaaactgcatagctCCCCTTTAACCTTAAGGCAGGATGATCAAGGCACGTGGTACacactataatataatataatataatataatacaatacactACAATCAAGGAGAGTCAAAGCAAAGCCAAAtgttagaaacaaaaaaaaggaggaagttTTCTTTACAATCATGGCTGCATTAAATCACTGTCTTTACACATATTAAGATTCCTCCTGATACTCTGTAGTTTTTCAATGTACTTGTTTGGTAAAATTGTAAttggttttattctttttttttctgcggTGATAGTTACCAACATTACACAGAATTTTTTTGGGTTTCGCTGACTTTAcatatacagtttattaaaacataaaacaactttTCTAAGCTCTGGAAAAAGttttacaaatataaaaaacaccCAGGAGTAAAACTTCTCAatttacctttttttgtttttctgttttaaggccctgacacaccaacccgagggccgaccgtcggcaggaAAGCCAGCGGGACTGATGGCTCCGAGTTGGttcaaaaagttcctcagaacacaccgaagaggcG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU60527 True 2173 lncRNA 0.39 2 42167877 42170069

Neighbor

gene id symbol gene type direction distance location
LOC120556744 NA coding upstream 153323 42012948 ~ 42014554 (+)
LOC120556738 LOC106676760 coding upstream 155545 42008452 ~ 42012332 (+)
LOC120556739 NA coding upstream 169476 41991407 ~ 41998401 (+)
LOC120556737 NA coding upstream 180300 41963364 ~ 41987577 (+)
LOC120556746 LOC106676760 coding upstream 206707 41958293 ~ 41961170 (+)
sdc4 NA coding downstream 323004 42493073 ~ 42518058 (+)
LOC120557014 NA coding downstream 374006 42544075 ~ 42556438 (+)
LOC120557143 NA coding downstream 429018 42599087 ~ 42601293 (+)
LOC120557144 NA coding downstream 432446 42602515 ~ 42615582 (+)
LOC120557750 NA coding downstream 447152 42617221 ~ 42630936 (+)
LOC120556755 NA non-coding upstream 210779 41939214 ~ 41957098 (+)
G45190 NA non-coding upstream 252574 41912164 ~ 41915303 (+)
G45193 NA non-coding upstream 309591 41855660 ~ 41858286 (+)
G45174 NA non-coding upstream 464800 41702634 ~ 41703077 (+)
G45119 LOC106676758 non-coding upstream 666786 41487332 ~ 41501091 (+)
G45245 NA non-coding downstream 179185 42349254 ~ 42350755 (+)
G45247 NA non-coding downstream 242136 42412205 ~ 42412427 (+)
G45248 NA non-coding downstream 251539 42421608 ~ 42429476 (+)
G45253 NA non-coding downstream 298166 42468235 ~ 42479826 (+)
G45254 NA non-coding downstream 298861 42468930 ~ 42483232 (+)
map1lc3a map1lc3a,LOC107551126 other upstream 255760 41905529 ~ 41912117 (+)
dynlrb1 dynlrb1,LOC106565026 other upstream 265246 41896995 ~ 41902631 (+)
G45186 NA other upstream 287510 41869730 ~ 41880367 (+)
LOC120557139 LOC106956008,LOC103153866,LOC103464266,LOC108411580,LOC102236494 other upstream 399564 41751003 ~ 41768313 (+)
LOC120557312 NA other upstream 1236494 40848815 ~ 40931383 (+)
G45237 NA other downstream 108216 42278285 ~ 42301895 (+)
rbm15b rbm15b,LOC102788268 other downstream 484719 42654788 ~ 42658388 (+)
G45557 NA other downstream 1668315 43838384 ~ 43838852 (+)
G45577 NA other downstream 1786758 43956827 ~ 43957173 (+)
G45635 NA other downstream 2190717 44360786 ~ 44468991 (+)

Expression


Co-expression Network