G45237


Basic Information

Item Value
gene id G45237
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 42278285 ~ 42301895 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU60535
CGTCTagttaacattttattaattcactttttaaaaacagaagaaaataaatcCCATTTGTTTTTGTGACGCAGTGATGAATCCGAGCTCAGCTTCCTGTTTGGGTCTGAGAgcatcatgggaggagagagccACGTACGGAGGTATTGTAACTACAGACTGCTGACGGAGAGAGATCTGTTTCTTAGAACCATTATTGTTCATGTCACCTGACCTCACTTATTCAAAGAGAAACTTTATTTAACGCACAGTGACAGAAGTCTCAGCAGCGGAAGAGTGTAAACATGGAGGCTTAtagaaaatattttataaatacagAGAGTGTTGCAttcgtgaaaaaaaaaaaacagaaaaatataaatacagtcttgttttttttttttactttttgtgatCTTTTTCCCTCGACAGTTTAGAGTTTACAGTGAGGAAGAGACAGAGGCTCTCAAAACCCAACCATGGAGGAAGATGACGCACACCATCTCCTGGTTTTACACCGGCTAGTTTCATTGATTGATGTACgagaaagggtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgggtttgcccatagcagtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtaacatAATCCTGCCTGTACTGAGCGTCCAGAGACAGAAGATGAAGGtaagaaggagaggaagaagttgtgagagaaaaaaaaaaagaaaatacaggaGAGGATGAGAACGCTACGGCAACGGATCTCATGTCCAATTCAAAATATGATAGAGAGGAGATATAGACATAGATAGCTTggtaaatgtgaatattttctagtttcttcactccaaacgtgacagtaaactgaacggattacatcatcttgggctttgggaaacaccgctttacatttttctctgttttcaggacattttagagaccaaacaacgcCTCCATTCATCCAGGAAAAGAATCCAGAGATGAATGGACGATGAACATCATGGTGGGCTGCGGCCCTAAGACGGGACATGATTACAGGTCTGAGAGACGACCAAAGAGACACCGAGAAGGTGacggggaggggagggagaggtcAGAAGAAGTGGACtttggaggagaggagagccgAGTGGGTCCCGCGTCCGCCTCACAGTCCCGTGTCGTTGTAGGTGGGCGTGGCCACCTTCAGGATGCTCTGAGCGTTCTCCTCCACCAGGGGGCGCCACTTGACCTCGCCGGTCAGCATCAGGTCCTCCCCGTCCAGGGCGTCGATGAACTGCATCTGCAACACGACAAAAACGGCCACGTTGAGGCTgcgttctcacacacacacacacacacacagagacagaaacacacacacacacacacacacacacacacacacacacaca
>TU60542
CGTCTagttaacattttattaattcactttttaaaaacagaagaaaataaatcCCATTTGTTTTTGTGACGCAGTGATGAATCCGAGCTCAGCTTCCTGTTTGGGTCTGAGAgcatcatgggaggagagagccACGTACGGAGGTATTGTAACTACAGACTGCTGACGGAGAGAGATCTGTTTCTTAGAACCATTATTGTTCATGTCACCTGACCTCACTTATTCAAAGAGAAACTTTATTTAACGCACAGTGACAGAAGTCTCAGCAGCGGAAGAGTGTAAACATGGAGGCTTAtagaaaatattttataaatacagAGAGTGTTGCAttcgtgaaaaaaaaaaaacagaaaaatataaatacagtcttgttttttttttttactttttgtgatCTTTTTCCCTCGACAGTTTAGAGTTTACAGTGAGGAAGAGACAGAGGCTCTCAAAACCCAACCATGGAGGAAGATGACGCACACCATCTCCTGGTTTTACACCGGCTAGTTTCATTGATTGATGTACgagaaagggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU60535 True 1413 TUCP 0.46 2 42278285 42301895
TU60542 False 572 lncRNA 0.39 2 42278285 42288948

Neighbor

gene id symbol gene type direction distance location
LOC120556744 NA coding upstream 263731 42012948 ~ 42014554 (+)
LOC120556738 LOC106676760 coding upstream 265953 42008452 ~ 42012332 (+)
LOC120556739 NA coding upstream 279884 41991407 ~ 41998401 (+)
LOC120556737 NA coding upstream 290708 41963364 ~ 41987577 (+)
LOC120556746 LOC106676760 coding upstream 317115 41958293 ~ 41961170 (+)
sdc4 NA coding downstream 191178 42493073 ~ 42518058 (+)
LOC120557014 NA coding downstream 242180 42544075 ~ 42556438 (+)
LOC120557143 NA coding downstream 297192 42599087 ~ 42601293 (+)
LOC120557144 NA coding downstream 300620 42602515 ~ 42615582 (+)
LOC120557750 NA coding downstream 315326 42617221 ~ 42630936 (+)
G45229 NA non-coding upstream 108216 42167877 ~ 42170069 (+)
LOC120556755 NA non-coding upstream 321187 41939214 ~ 41957098 (+)
G45190 NA non-coding upstream 362982 41912164 ~ 41915303 (+)
G45193 NA non-coding upstream 419999 41855660 ~ 41858286 (+)
G45174 NA non-coding upstream 575208 41702634 ~ 41703077 (+)
G45245 NA non-coding downstream 47359 42349254 ~ 42350755 (+)
G45247 NA non-coding downstream 110310 42412205 ~ 42412427 (+)
G45248 NA non-coding downstream 119713 42421608 ~ 42429476 (+)
G45253 NA non-coding downstream 166340 42468235 ~ 42479826 (+)
G45254 NA non-coding downstream 167035 42468930 ~ 42483232 (+)
map1lc3a map1lc3a,LOC107551126 other upstream 366168 41905529 ~ 41912117 (+)
dynlrb1 dynlrb1,LOC106565026 other upstream 375654 41896995 ~ 41902631 (+)
G45186 NA other upstream 397918 41869730 ~ 41880367 (+)
LOC120557139 LOC106956008,LOC103153866,LOC103464266,LOC108411580,LOC102236494 other upstream 509972 41751003 ~ 41768313 (+)
LOC120557312 NA other upstream 1346902 40848815 ~ 40931383 (+)
rbm15b rbm15b,LOC102788268 other downstream 352893 42654788 ~ 42658388 (+)
G45557 NA other downstream 1536489 43838384 ~ 43838852 (+)
G45577 NA other downstream 1654932 43956827 ~ 43957173 (+)
G45635 NA other downstream 2058891 44360786 ~ 44468991 (+)
G45647 NA other downstream 2102008 44403903 ~ 44407449 (+)

Expression


Co-expression Network