G45253


Basic Information

Item Value
gene id G45253
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 42468235 ~ 42479826 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU60570
CCAGCAGTGGAGGACATGTTGGagcgtgtgaacacagcgtccctctttcattccttcaaccagcttcttgtaAAGGTCGCCTCATATCCAAAAAAAcgtgttgatatccaagtctttgataacgTTTAATAGTAACTGTGTTTCTCCTCGTTGGGTCTACAgccctgcaaacacacagagctgaaCATAAGCCGTAAACgtgcaagaggccgtaaactgcagTAAAACCCTGATCGAGACGCATAttctgaatgcgctgtataTATGTcaaaagaatgcttctaaaacctgaataatatcACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU60570 True 304 lncRNA 0.43 2 42468235 42479826

Neighbor

gene id symbol gene type direction distance location
LOC120556744 NA coding upstream 453681 42012948 ~ 42014554 (+)
LOC120556738 LOC106676760 coding upstream 455903 42008452 ~ 42012332 (+)
LOC120556739 NA coding upstream 469834 41991407 ~ 41998401 (+)
LOC120556737 NA coding upstream 480658 41963364 ~ 41987577 (+)
LOC120556746 LOC106676760 coding upstream 507065 41958293 ~ 41961170 (+)
sdc4 NA coding downstream 13247 42493073 ~ 42518058 (+)
LOC120557014 NA coding downstream 64249 42544075 ~ 42556438 (+)
LOC120557143 NA coding downstream 119261 42599087 ~ 42601293 (+)
LOC120557144 NA coding downstream 122689 42602515 ~ 42615582 (+)
LOC120557750 NA coding downstream 137395 42617221 ~ 42630936 (+)
G45248 NA non-coding upstream 38759 42421608 ~ 42429476 (+)
G45247 NA non-coding upstream 55808 42412205 ~ 42412427 (+)
G45245 NA non-coding upstream 117480 42349254 ~ 42350755 (+)
G45229 NA non-coding upstream 298166 42167877 ~ 42170069 (+)
LOC120556755 NA non-coding upstream 511137 41939214 ~ 41957098 (+)
G45265 NA non-coding downstream 99638 42579464 ~ 42580273 (+)
G45270 NA non-coding downstream 148742 42628568 ~ 42641102 (+)
G45271 NA non-coding downstream 161977 42641803 ~ 42644002 (+)
G45410 NA non-coding downstream 179553 42659379 ~ 42660437 (+)
G45411 NA non-coding downstream 183843 42663669 ~ 42663936 (+)
G45237 NA other upstream 166340 42278285 ~ 42301895 (+)
map1lc3a map1lc3a,LOC107551126 other upstream 556118 41905529 ~ 41912117 (+)
dynlrb1 dynlrb1,LOC106565026 other upstream 565604 41896995 ~ 41902631 (+)
G45186 NA other upstream 587868 41869730 ~ 41880367 (+)
LOC120557139 LOC106956008,LOC103153866,LOC103464266,LOC108411580,LOC102236494 other upstream 699922 41751003 ~ 41768313 (+)
rbm15b rbm15b,LOC102788268 other downstream 174962 42654788 ~ 42658388 (+)
G45557 NA other downstream 1358558 43838384 ~ 43838852 (+)
G45577 NA other downstream 1477001 43956827 ~ 43957173 (+)
G45635 NA other downstream 1880960 44360786 ~ 44468991 (+)
G45647 NA other downstream 1924077 44403903 ~ 44407449 (+)

Expression


Co-expression Network