G45576


Basic Information

Item Value
gene id G45576
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 43953839 ~ 43954039 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU61016
aaaaaaagaaaaaggagaaacgGTCCGTCCAAAGTTGTCAGCCTGTGTACAGCTATAAAGATAGCGACACCAAGAGGTCGgtgagaagttatccagtagcGTCGTTCTCCCGGTCCGCCCGGAGAGTCGGGACTATGGACTCTGCGTAGAAACTCACTGCCTCCTCCGCTGTAGCGAAGCTGTACTTGCCGCCGTTGAATG

Function

GO: NA

KEGG:

id description
ko04260 Cardiac muscle contraction

RNA

RNA id representative length rna type GC content exon number start site end site
TU61016 True 201 lncRNA 0.52 1 43953839 43954039

Neighbor

gene id symbol gene type direction distance location
nicn1 nicn1,LOC103371623 coding upstream 374834 43568609 ~ 43579005 (+)
LOC120558241 NA coding upstream 443380 43510346 ~ 43510459 (+)
LOC120557146 NA coding upstream 511315 43412120 ~ 43442524 (+)
manf manf,LOC102787989 coding upstream 1302508 42645340 ~ 42651331 (+)
LOC120557750 NA coding upstream 1322903 42617221 ~ 42630936 (+)
amigo3 NA coding downstream 262374 44216413 ~ 44220156 (+)
LOC120557212 NA coding downstream 396368 44350407 ~ 44352218 (+)
LOC120557215 mkrn2os coding downstream 528786 44482825 ~ 44486761 (+)
LOC120557218 rbm39,LOC106937047,LOC103363772,LOC103131234 coding downstream 546005 44500044 ~ 44510159 (+)
isy1 LOC106531751,LOC101464245,LOC102301427 coding downstream 573332 44527371 ~ 44533309 (+)
G45562 NA non-coding upstream 14205 43891115 ~ 43939634 (+)
G45550 NA non-coding upstream 184767 43768871 ~ 43769072 (+)
G45540 NA non-coding upstream 251831 43622307 ~ 43702008 (+)
G45543 NA non-coding upstream 309939 43643674 ~ 43643900 (+)
G45539 NA non-coding upstream 337747 43615850 ~ 43616092 (+)
G45579 NA non-coding downstream 9558 43963597 ~ 43963822 (+)
G45580 NA non-coding downstream 32896 43986935 ~ 43987969 (+)
G45582 NA non-coding downstream 42131 43996170 ~ 43996369 (+)
G45584 NA non-coding downstream 109019 44063058 ~ 44063261 (+)
G45585 NA non-coding downstream 138635 44092674 ~ 44109524 (+)
G45557 NA other upstream 114987 43838384 ~ 43838852 (+)
rbm15b rbm15b,LOC102788268 other upstream 1295451 42654788 ~ 42658388 (+)
G45237 NA other upstream 1651944 42278285 ~ 42301895 (+)
map1lc3a map1lc3a,LOC107551126 other upstream 2041722 41905529 ~ 41912117 (+)
dynlrb1 dynlrb1,LOC106565026 other upstream 2051208 41896995 ~ 41902631 (+)
G45577 NA other downstream 2788 43956827 ~ 43957173 (+)
G45635 NA other downstream 406747 44360786 ~ 44468991 (+)
G45647 NA other downstream 449864 44403903 ~ 44407449 (+)
tsen2 tsen2,LOC102785813 other downstream 534917 44488956 ~ 44499296 (+)
LOC120557302 kcnq2,LOC107384874,LOC103370155,LOC108251245 other downstream 758376 44712415 ~ 44744790 (+)

Expression


Co-expression Network