G45582


Basic Information

Item Value
gene id G45582
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 43996170 ~ 43996369 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU61023
gtctctctacatactactctctactgttgtctctctacatactactctactgttgtctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctctacatactactctctgctgttgtctctctacatactactctctactgctgtctct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU61023 True 200 lncRNA 0.41 1 43996170 43996369

Neighbor

gene id symbol gene type direction distance location
nicn1 nicn1,LOC103371623 coding upstream 417165 43568609 ~ 43579005 (+)
LOC120558241 NA coding upstream 485711 43510346 ~ 43510459 (+)
LOC120557146 NA coding upstream 553646 43412120 ~ 43442524 (+)
manf manf,LOC102787989 coding upstream 1344839 42645340 ~ 42651331 (+)
LOC120557750 NA coding upstream 1365234 42617221 ~ 42630936 (+)
amigo3 NA coding downstream 220044 44216413 ~ 44220156 (+)
LOC120557212 NA coding downstream 354038 44350407 ~ 44352218 (+)
LOC120557215 mkrn2os coding downstream 486456 44482825 ~ 44486761 (+)
LOC120557218 rbm39,LOC106937047,LOC103363772,LOC103131234 coding downstream 503675 44500044 ~ 44510159 (+)
isy1 LOC106531751,LOC101464245,LOC102301427 coding downstream 531002 44527371 ~ 44533309 (+)
G45580 NA non-coding upstream 8201 43986935 ~ 43987969 (+)
G45579 NA non-coding upstream 32348 43963597 ~ 43963822 (+)
G45576 NA non-coding upstream 42131 43953839 ~ 43954039 (+)
G45562 NA non-coding upstream 56536 43891115 ~ 43939634 (+)
G45550 NA non-coding upstream 227098 43768871 ~ 43769072 (+)
G45584 NA non-coding downstream 66689 44063058 ~ 44063261 (+)
G45585 NA non-coding downstream 96305 44092674 ~ 44109524 (+)
G45592 NA non-coding downstream 161536 44157905 ~ 44158199 (+)
G45593 NA non-coding downstream 162084 44158453 ~ 44158841 (+)
G45597 NA non-coding downstream 172163 44168532 ~ 44170045 (+)
G45577 NA other upstream 38997 43956827 ~ 43957173 (+)
G45557 NA other upstream 157318 43838384 ~ 43838852 (+)
rbm15b rbm15b,LOC102788268 other upstream 1337782 42654788 ~ 42658388 (+)
G45237 NA other upstream 1694275 42278285 ~ 42301895 (+)
map1lc3a map1lc3a,LOC107551126 other upstream 2084053 41905529 ~ 41912117 (+)
G45635 NA other downstream 364417 44360786 ~ 44468991 (+)
G45647 NA other downstream 407534 44403903 ~ 44407449 (+)
tsen2 tsen2,LOC102785813 other downstream 492587 44488956 ~ 44499296 (+)
LOC120557302 kcnq2,LOC107384874,LOC103370155,LOC108251245 other downstream 716046 44712415 ~ 44744790 (+)

Expression


Co-expression Network