G45597


Basic Information

Item Value
gene id G45597
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 44168532 ~ 44170045 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU61044
cacacaacagacaaacacatagcacacacacgcatatacacacatgcacacagagacacacgcacgcatgcgcgcgcacacacacacacacacacatacagccagCCTCCATTGATCTTTGACAGAGAACGCTCCTGTTCCTCTATAAATAGTCTCTCAGTAACCTTGAGCTGTGtgtccctctctgctctctctgcagCAGATATTTGCGTCTCCCTCAGCCTGGTGTCAGGAGCGAGCGCAGAGAGCATCGAGAGCGAGCATCGGGAGTGTTAAAAGCAGACTCGAAAGTGTCAACATTGAGTGTTGAAAGCGTTGCTAGCGAGaaagttataaagttattagCCATCACTAACAGATTGCAATAgaacatttatttcaaaatagaaaacgTAGCATCAACATAGCAAcattgtgagatactgtatattgtttttttttttcaatctggtctctttttttccccccatgttTTGTGTCTGAGGCggtttagtttggttgaatcgAACTAGAGTTCGTTTGTCACATcagcattgaacattttaaatttaaaacagctgattatgtaggtgtgtgtgtgtgtgtgtgttaacgtgcgcttgttgtcCTGTGTGAGCTGAtacctcatctgttgacatttctgaatgccttcctacagctgcttcataaaagctttccacacaaacacacctacatgtcattagtatgagaacaaaatgagattttaactgtgttgggctcgggtcgggctcggacagaaatgtcttaatgcctgtcgggctcgggccgggtttggttactgctctgtcggacgcgggccgggctcggacagaaaaatgcggccagATCTGCACTCTACCAGACACAgccgaccaataagaggagtggacgttcttgcgtgatttgtaatgccgcattttggtacgcttggatttttccaggtgtgaaaccaaaccaaaccgaaccgagggcaaatcgctccaagtttactaactcaccaactgattcggaccaaagcaaacaaagtaCAGGTGTGAAGACGCCCTTAGTCACcaaacctaccagactccatttaaaaaaaaagaagacttttatcatcgtaaaacacacttcattcaaagtggacagaaactaaataaaactaccaaaagccgtcttggttcatctttccactgttccaacaatcaccactctggtttggttgaaataaacccttaattcacccatttacatgtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacactaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacactaaaagtcctgattatttacatggagtctggtggagatatgctagctctatacacgctaaaagtcctgattatttacatggagtctggtggagtttggtgatggtgatttcggggctgtttcatgttaaactaaaaggat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU61044 True 1514 lncRNA 0.44 1 44168532 44170045

Neighbor

gene id symbol gene type direction distance location
LOC120558025 LOC102289652,LOC101467503,LOC103368898 coding upstream 60841 43895634 ~ 44107691 (+)
nicn1 nicn1,LOC103371623 coding upstream 589527 43568609 ~ 43579005 (+)
LOC120558241 NA coding upstream 658073 43510346 ~ 43510459 (+)
LOC120557146 NA coding upstream 726008 43412120 ~ 43442524 (+)
manf manf,LOC102787989 coding upstream 1517201 42645340 ~ 42651331 (+)
amigo3 NA coding downstream 46368 44216413 ~ 44220156 (+)
LOC120557212 NA coding downstream 180362 44350407 ~ 44352218 (+)
LOC120557215 mkrn2os coding downstream 312780 44482825 ~ 44486761 (+)
LOC120557218 rbm39,LOC106937047,LOC103363772,LOC103131234 coding downstream 329999 44500044 ~ 44510159 (+)
isy1 LOC106531751,LOC101464245,LOC102301427 coding downstream 357326 44527371 ~ 44533309 (+)
G45593 NA non-coding upstream 9691 44158453 ~ 44158841 (+)
G45592 NA non-coding upstream 10333 44157905 ~ 44158199 (+)
G45585 NA non-coding upstream 59008 44092674 ~ 44109524 (+)
G45584 NA non-coding upstream 105271 44063058 ~ 44063261 (+)
G45582 NA non-coding upstream 172163 43996170 ~ 43996369 (+)
G45612 NA non-coding downstream 104017 44274062 ~ 44347251 (+)
G45634 NA non-coding downstream 188247 44358292 ~ 44358567 (+)
G45636 NA non-coding downstream 191117 44361162 ~ 44390201 (+)
G45640 NA non-coding downstream 200766 44370811 ~ 44373154 (+)
G45831 NA non-coding downstream 544128 44714173 ~ 44714690 (+)
G45577 NA other upstream 211359 43956827 ~ 43957173 (+)
G45557 NA other upstream 329680 43838384 ~ 43838852 (+)
rbm15b rbm15b,LOC102788268 other upstream 1510144 42654788 ~ 42658388 (+)
G45237 NA other upstream 1866637 42278285 ~ 42301895 (+)
map1lc3a map1lc3a,LOC107551126 other upstream 2256415 41905529 ~ 41912117 (+)
G45635 NA other downstream 190741 44360786 ~ 44468991 (+)
G45647 NA other downstream 233858 44403903 ~ 44407449 (+)
tsen2 tsen2,LOC102785813 other downstream 318911 44488956 ~ 44499296 (+)
LOC120557302 kcnq2,LOC107384874,LOC103370155,LOC108251245 other downstream 542370 44712415 ~ 44744790 (+)

Expression


Co-expression Network