XLOC_005094



Basic Information


Item Value
gene id XLOC_005094
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 3860464 ~ 3865234 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00011072
aaagctgaaaactttcaACAATTAGTAGGAAaagctatggaagtcagtggttccaacatttgtcaaaatatcttcttttgtgttcaacagcaggaaCAAATACGcctgaaacaagtgaaggTTCCGTCACCGTTATTATCGGCCTCTCGGACGACGGCGTCGATCTCTCTGCGGTTCATGTGTTCACCCAGTAATTTCGTCATCGCACAGCGCAGTTCTTCAGTGGTGATCGCACCGTCACCGTCCATATCAAACTGCAGACCACAAACAAAGAAACACTGAAAACATGAACTGCACATGTTTCTCTGCATTAATTACAGTACCTgcagcagcaaaaaaataaataaaaatactaaat

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00011072 True 358 lncRNA 0.42 2 3860464 3865234

Neighbor


gene id symbol gene type direction distance location
XLOC_005093 taok2b coding downstream 19800 3789114 ~ 3840664 (-)
XLOC_005092 NA coding downstream 74082 3782621 ~ 3786382 (-)
XLOC_005091 MAZ coding downstream 81616 3766557 ~ 3778848 (-)
XLOC_005090 tlcd3bb coding downstream 104059 3740605 ~ 3756405 (-)
XLOC_005089 vps25 coding downstream 138507 3714076 ~ 3721957 (-)
XLOC_005095 gdpd3b coding upstream 27798 3893032 ~ 3904011 (-)
XLOC_005096 zgc:92040 coding upstream 60934 3926168 ~ 3940768 (-)
XLOC_005097 eif3c coding upstream 78995 3944229 ~ 3962372 (-)
XLOC_005098 ppp4cb coding upstream 99117 3964351 ~ 3978342 (-)
XLOC_005099 si:ch211-136m16.8 coding upstream 116112 3981346 ~ 3992839 (-)
XLOC_005087 NA non-coding downstream 290383 3569747 ~ 3570081 (-)
XLOC_005086 NA non-coding downstream 316448 3519168 ~ 3544016 (-)
XLOC_005083 NA non-coding downstream 575555 3281756 ~ 3284909 (-)
XLOC_005073 NA non-coding downstream 1115823 2703355 ~ 2744641 (-)
XLOC_005102 NA non-coding upstream 224503 4089737 ~ 4129820 (-)
XLOC_005103 NA non-coding upstream 278360 4143594 ~ 4169699 (-)
XLOC_005105 NA non-coding upstream 324788 4190022 ~ 4194304 (-)
XLOC_005109 NA non-coding upstream 366623 4231857 ~ 4232505 (-)
XLOC_005111 NA non-coding upstream 409676 4274910 ~ 4287034 (-)

Expression



Co-expression Network