G45635


Basic Information

Item Value
gene id G45635
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 44360786 ~ 44468991 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU61088
caaataatacaaaacatgttcctaaattaaaatgaatccaCATTAATAAGAGCTTCTAAATCTGGCTATGCTGCAGTGGAAAACCTATTCACATTTTATTGAAGTTCAATCTTTACAGTACGAAGATCCAGTTCACTGTGAACTTACATTCTGCTGCTCCAGTCTCAGTGTGTCGCCACATTCACGTGCACATCAGACCGTTACGtgcgctgacagactcagattattattctaagtgtctgacaacattatgggatggatccctacagagatagaccttttagttaaagagtaagatccttttagtttaacatgaaacagccccgaaatcaccatcaccaaactccaccagactccatgtaaataatcaggactttcagcgtgtatagagccagcatatctccactagactccatgtaaataatcaggacttttatcatcgtaaaacatacttcattcaaagtggacagaaactaaatcaaactatcaaaagccgtcttggttcatctttccactgttccaacaatcaccactctggtttggttgaaataaacccttaattcacccatttacatgtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggcgctatacacgctaaaagtcctgattatttacatggagtctggtggaaatatgctggctctatacacgctgaaagtcctgattatttacatggagtctggtgggtttggtgatggtgatttagtGTGCATGTGAGCTGAAAGCTTCAGTgaactgcatttaaaaaacgcctttttaaaaataaagagtACATGATTTAAAATCAGTGAGTCAGGAGAATATTTCAGCTTCAACTGAAGTCAAAATTCATCATCGTTAagaaaaatcaacataaaatctAAATATATCTTTCTCTCGCCTGTAATCTTCGTTGTGACAGCGTCTCAGAGCGTCCGAGTGATGACATCTGTTTAAACTACAGGAGAGCATCAAACTAAATCACCtcaaactgtctctctctcaaaagATTCAACATTTCACATTCAGAGAACATCGGCTGCATTATTAATTCAAATTGTTCCCAAAAACTACAAAATCACAAATTCAAAAACTTACTTTCCTCCCCCGAAAAACACATAAATCACACTAATctaaaacaacagacaaaaacatctaaaacaagagacaaaaatgtcacattttgtcacttttttaaatgtttttttgacatttttgccacttaaAAGAGaaattttgttgcttttttgacatttttttaaaagtctgattatttacatggagtctggtgggtttggtgatggggatttcgTTCTATCAAAGATtgctcccatcagtcacttagacacaaaaacatggaaaataggCATAGTCAATAGTCATGGAAAGTTGTGGAAAGTTGTGGAAAGTGAAAATGACTCTACTGGCCCCCCCAATGTTTCCTCTGCTATCATTCATCCTTTCTGCACTAAGATGAAACCAAACGCTCCGACAGTAAAACTGTGTCAAATGGAAACTGACTTCTGAACAGTTAACGGTTCTTCATTCTCCCTTTTgttaaacttttgtttttgctgataAATGTCTAAATCTCCCAGCATGCACCTTTCAGTGCACGTCCTTTCAGTGTAAAAGCTTTTTCTTCAAATCCAAAAATAATTCAAATATCCGTCATGTTTCCCTTTATATTTATCCCTGAAATGTgtaggtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgttgtgtgttctcATATTTCTGTTAAATCCTAAACATTTTAAGTATAAatttgcagtttgtttttaaagtggaAATAAATATTGAGAGTGATGATGAAACAGTTCAAAGTTCTCTGTGTTCTCCTGTTTCTGTTAAATctcaagtgtgtgtgtgtgtgtgtgtgtgtgtaacatttcTGTCAACTTCAAGTGACTTTTGTGCAGTTTGTCttaaaagtacaaaataaaTCTTGAATGAAAATGTTCTCAACTTAATATTCTAGAGTCCAGATGTGGACTCGATGATCTAAAGAAATCTTTTTGTGCAgtttcaacattttaaaaatgaaaatgaatctgAGGGAAGACTTGTTTACGTATTACTCTGCTACTAAAGTACAGATAGGGGGCTGGGGGGCAGCAACAcagcttttactttgaaaggaCTTCTCCTTAGGTCTTCTGTCTTCCTGAAGAGAATGGTTCGTCTCCCTCTACTCTCCCTTTAAAGGTAGAGGCTAGAAGGATTATAATATATTTAgagaaacaaatacattttgatattaGCGTAGATTTAGCGAGATGTAGCGTAACTTCTGGCCGTAGCCGTATCCCTTCTAGCTGctacctcttttcttcttccctctgttTTTAACCCTGGGCTTCAGTGTCAGTCAGGAGTCACTGGGCGGAGTCAGTGGGCGGGGTCTGTGCCGGCGGCGCCGAGCCGGTGCCAGTCCACCCAGTGCTGCCCCGGGACGAGCCTCTTCAGAGGGATGAAGGTCTCCCCCAGCAGAGAGTTCTCCCAGAACggcccatctcccagaacacgCAGGTGGATCACCCTCTGGTCCACGTCCCCCCAGGGGATCCGCT
>TU61091
gtgtgtatgtgtgtgtgtgtgtatgtgtgtgtgtgtgcgtgccttgcgtgtgtgtgtgcattagtgtgtgtgtgtgtgtctgtctctgtgtatgtttgtgtgtgtgtgtgcctgcgtgtgtgttcgttagtgtgtgtgtgtctatctgtctgtctgtctgtctgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtgcgtgcatgtgtgtctgtgcgcgcgtgtgtctgtgtgtgtgtgtgtgtgtgtgtctgtctgtgcatgtctgtgcgtgtgtgtgtctgtctgtacgtgtgtgtctgtctgtacgtgtgtgtgtgtatgtctgtctgtgcgtgtgtgtgtgtgtgtatgtgtgtgtgtgtctgtatgtgtgtgtctgtctgtacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtgcatgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgt
>TU61094
ttttcttttcaattcaagtttattttgtagtgcaaataatacaaaacatgttcctaaattaaaatgaatccaCATTAATAAGAGCTTCTAAATCTGGCTATGCTGCAGTGGAAAACCTATTCACATTTTATTGAAGTTCAATCTTTACAGTACGAAGATCCAGTTCACTGTGAACTTACATTCTGCTGCTCCAGTCTCAGTGTGTCGCCACATTCACGTGCACATCAGACCGTTACGtgcgctgacagactcagattattattctaagtgtctgacaacattatgggatggatccctacagagatagaccttttagttaaagagtaagatccttttagtttaacatgaaacagccccgaaatcaccatcaccaaactccaccagactccatgtaaataatcaggactttcagcgtgtatagagccagcatatctccactagactccatgtaaataatcaggacttttatcatcgtaaaacatacttcattcaaagtggacagaaactaaatcaaactatcaaaagccgtcttggttcatctttccactgttccaacaatcaccactctggtttggttgaaataaacccttaattcacccatttacatgtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtgggtttggtgatggtgatttagtGTGCATGTGAGCTGAAAGCTTCAGTgaactgcatttaaaaaacgcctttttaaaaataaagagtACATGATTTAAAATCAGTGAGTCAGGAGAATATTTCAGCTTCAACTGAAGTCAAAATTCATCATCGTTAagaaaaatcaacataaaatctAAATATATCTTTCTCTCGCCTGTAATCTTCGTTGTGACAGCGTCTCAGAGCGTCCGAGTGATGACATCTGTTTAAACTACAGGAGAGCATCAAACTAAATCACCtcaaactgtctctctctcaaaagATTCAACATTTCACATTCAGAGAACATCGGCTGCATTATTAATTCAAATTGTTCCCAAAAACTACAAAATCACAAATTCAAAAACTTACTTTCCTCCCCCGAAAAACACATAAATCACACTAATctaaaacaacagacaaaaacatctaaaacaagagacaaaaatgtcacattttgtcacttttttaaatgtttttttgacatttttgccacttaaAAGAGaaattttgttgcttttttgacatttttttaaaagtctgattatttacatggagtctggtgggtttggtgatggggatttcgTTCTATCAAAGATtgctcccatcagtcacttagacacaaaaacatggaaaataggCATAGTCAATAGTCATGGAAAGTTGTGGAAAGTTGTGGAAAGTGAAAATGACTCTACTGGCCCCCCCAATGTTTCCTCTGCTATCATTCATCCTTTCTGCACTAAGATGAAACCAAACGCTCCGACAGTAAAACTGTGTCAAATGGAAACTGACTTCTGAACAGTTAACGGTTCTTCATTCTCCCTTTTgttaaacttttgtttttgctgataAATGTCTAAATCTCCCAGCATGCACCTTTCAGTGCACGTCCTTTCAGTGTAAAAGCTTTTTCTTCAAATCCAAAAATAATTCAAATATCCGTCATGTTTCCCTTTATATTTATCCCTGAAATGTgtaggtctctgtgtgtgtgtgtgtgtgttctcATATTTCTGTTAAATCCTAAACATTTTAAGTATAAatttgcagtttgtttttaaagtggaAATAAATATTGAGAGTGATGATGAAACAGTTCAAAGTTCTCTGTGTTCTCCTGTTTCTGTTAAATctcaagtgtgtgtgtgtgtgtgtgtgtgtgtgtaacatttcTGTCAACTTCAAGTGACTTTTGTGCAGTTTGTCttaaaagtacaaaataaaTCTTGAATGAAAATGTTCTCAACTTAATATTCTAGAGTCCAGATGTGGACTCGATGATCTAAAGAAATCTTTTTGTGCAgtttcaacattttaaaaatgaaaatgaatctgAGGGAAGACTTGTTTACGTATTACTCTGCTACTAAAGTACAGATAGGGGGCTGGGGGGCAGCAACAcagcttttactttgaaaggaCTTCTCCTTAGGTCTTCTGTCTTCCTGAAGAGAATGGTTCGTCTCCCTCTACTCTCCCTTTAAAGGTAGAGGCTAGAAGGATTATAATATATTTAgagaaacaaatacattttgatattaGCGTAGATTTAGCGAGATGTAGCGTAACTTCTGGCCGTAGCCGTATCCCTTCTAGCTGctacctcttttcttcttccctctgttTTTAACCCTGGGCTTCAGTGTCAGTCAGGAGTCACTGGGCGGAGTCAGTGGGCGGGGTCTGTGCCGGCGGCGCCGAGCCGGTGCCAGTCCACCCAGTGCTGCCCCGGGACGAGCCTCTTCAGAGGGATGAAGGTCTCCCCCAGCAGAGAGTTCTCCCAGAACggcccatctcccagaacacgCAGGTGGATCACCCTCTGGTCCACGTCCCCCCAGGGGATCCGCT
>TU61095
caaataatacaaaacatgttcctaaattaaaatgaatccaCATTAATAAGAGCTTCTAAATCTGGCTATGCTGCAGTGGAAAACCTATTCACATTTTATTGAAGTTCAATCTTTACAGTACGAAGATCCAGTTCACTGTGAACTTACATTCTGCTGCTCCAGTCTCAGTGTGTCGCCACATTCACGTGCACATCAGACCGTTACGtgcgctgacagactcagattattattctaagtgtctgacaacattatgggatggatccctacagagatagaccttttagttaaagagtaagatccttttagtttaacatgaaacagccccgaaatcaccatcaccaaactccaccagactccatgtaaataatcaggactttcagcgtgtatagagccagcatatctccactagactccatgtaaataatcaggacttttatcatcgtaaaacatacttcattcaaagtggacagaaactaaatcaaactatcaaaagccgtcttggttcatctttccactgttccaacaatcaccactctggtttggttgaaataaacccttaattcacccatttacatgtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggcgctatacacgctaaaagtcctgattatttacatggagtctggtggaaatatgctggctctatacacgctgaaagtcctgattatttacatggagtctggtgggtttggtgatggtgatttagtGTGCATGTGAGCTGAAAGCTTCAGTgaactgcatttaaaaaacgcctttttaaaaataaagagtACATGATTTAAAATCAGTGAGTCAGGAGAATATTTCAGCTTCAACTGAAGTCAAAATTCATCATCGTTAagaaaaatcaacataaaatctAAATATATCTTTCTCTCGCCTGTAATCTTCGTTGTGACAGCGTCTCAGAGCGTCCGAGTGATGACATCTGTTTAAACTACAGGAGAGCATCAAACTAAATCACCtcaaactgtctctctctcaaaagATTCAACATTTCACATTCAGAGAACATCGGCTGCATTATTAATTCAAATTGTTCCCAAAAACTACAAAATCACAAATTCAAAAACTTACTTTCCTCCCCCGAAAAACACATAAATCACACTAATctaaaacaacagacaaaaacatctaaaacaagagacaaaaatgtcacattttgtcacttttttaaatgtttttttgacatttttgccacttaaAAGAGaaattttgttgcttttttgacatttttttaaaagtctgattatttacatggagtctggtgggtttggtgatggggatttcgTTCTATCAAAGATtgctcccatcagtcacttagacacaaaaacatggaaaataggCATAGTCAATAGTCATGGAAAGTTGTGGAAAGTTGTGGAAAGTGAAAATGACTCTACTGGCCCCCCCAATGTTTCCTCTGCTATCATTCATCCTTTCTGCACTAAGATGAAACCAAACGCTCCGACAGTAAAACTGTGTCAAATGGAAACTGACTTCTGAACAGTTAACGGTTCTTCATTCTCCCTTTTgttaaacttttgtttttgctgataAATGTCTAAATCTCCCAGCATGCACCTTTCAGTGCACGTCCTTTCAGTGTAAAAGCTTTTTCTTCAAATCCAAAAATAATTCAAATATCCGTCATGTTTCCCTTTATATTTATCCCTGAAATGTgtaggtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU61088 True 2648 lncRNA 0.39 2 44400478 44403175
TU61091 False 471 TUCP 0.50 2 44360786 44361368
TU61094 False 2541 lncRNA 0.39 4 44400446 44403175
TU61095 False 1796 lncRNA 0.37 2 44400478 44468991

Neighbor

gene id symbol gene type direction distance location
LOC120557212 NA coding upstream 8568 44350407 ~ 44352218 (+)
amigo3 NA coding upstream 140630 44216413 ~ 44220156 (+)
LOC120558025 LOC102289652,LOC101467503,LOC103368898 coding upstream 253095 43895634 ~ 44107691 (+)
nicn1 nicn1,LOC103371623 coding upstream 781781 43568609 ~ 43579005 (+)
LOC120558241 NA coding upstream 850327 43510346 ~ 43510459 (+)
LOC120557215 mkrn2os coding downstream 13834 44482825 ~ 44486761 (+)
LOC120557218 rbm39,LOC106937047,LOC103363772,LOC103131234 coding downstream 31053 44500044 ~ 44510159 (+)
isy1 LOC106531751,LOC101464245,LOC102301427 coding downstream 58380 44527371 ~ 44533309 (+)
zgc:77375 NA coding downstream 64416 44533407 ~ 44545229 (+)
pcif1 pcif1,LOC102784095 coding downstream 77043 44546034 ~ 44566401 (+)
G45634 NA non-coding upstream 2219 44358292 ~ 44358567 (+)
G45612 NA non-coding upstream 13535 44274062 ~ 44347251 (+)
G45597 NA non-coding upstream 190741 44168532 ~ 44170045 (+)
G45593 NA non-coding upstream 201945 44158453 ~ 44158841 (+)
G45592 NA non-coding upstream 202587 44157905 ~ 44158199 (+)
G45831 NA non-coding downstream 245182 44714173 ~ 44714690 (+)
G45863 NA non-coding downstream 337719 44806710 ~ 44807403 (+)
G45873 NA non-coding downstream 354537 44823528 ~ 44824784 (+)
LOC120556889 NA non-coding downstream 371071 44840062 ~ 44841232 (+)
G45577 NA other upstream 403613 43956827 ~ 43957173 (+)
G45557 NA other upstream 521934 43838384 ~ 43838852 (+)
rbm15b rbm15b,LOC102788268 other upstream 1702398 42654788 ~ 42658388 (+)
G45237 NA other upstream 2058891 42278285 ~ 42301895 (+)
map1lc3a map1lc3a,LOC107551126 other upstream 2448669 41905529 ~ 41912117 (+)
tsen2 tsen2,LOC102785813 other downstream 19965 44488956 ~ 44499296 (+)
LOC120557302 kcnq2,LOC107384874,LOC103370155,LOC108251245 other downstream 243424 44712415 ~ 44744790 (+)

Expression


Co-expression Network