LOC120556644


Basic Information

Item Value
gene id LOC120556644
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 15453193 ~ 15455490 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796279.1
CACGTGACACAGTTACTGGACGTTAGTCCGAGTTGGGGCTTCTCGGTTCTAAACAAACCGTCTCTGGTGCTCTGGGAGGATTAAGTTCAGTTGGCATTTGACGCTCTGCTGTCACCACGGACGTTTGGGGCAGAAAAAATGGCTTTCCTAATGAAATGTTGCACATTAATCGTCAATGTGTTATGCTTGCCCCTTCATCTGATCGAAGCGGTCGGTCTCTATGAACTATACAAACGTGTCTTCCCAATTTGGTTATACCGGTTTTCTAAAACGTACAACAAGAAAATGTACGACAAGAAGAAGGAGCTGTTTCGCAGTCTCCCCGAGTTCAACAAGCCTGGCGGGCAGCTCACAATTTTGGAGATCGGCTGCGGCACCGGCGCAAATTTTGAGTTTTATCCGCCTGGTTGCAAGGTGATCTGCACTGACCCGAACCCTCATTTTCAGAAATATCTGAAGAAAAATATCGGCGAGAATGACCACCTCACCTTTGAGAGATTTGTGGTGGCATCGGGGGAGGACATGGGGTCAGTTGAGAGCGAATCGGTAGACGTTGTTGTCTGCACCCTGGTGCTCTGCTCTGTCAACAACATAACCCAAACTCTGCGAGAGGCGCGTCGCATACTGAGACCAGGTGGAGCCTTCTTTTTCCTAGAGCATGTTGTTGCAGATCCATCAACTTGGGCATACTTCTTCCAGCATGTTCTGCAGCCTCCATGGTACTATTTCGGTGATGGATGTGAGGTCACCCGGGAAACATGGAAACATGTGGAGGCAGCTGGATTCTCTGAACTCAAACTGAGACACATCGAAGCGCCACTTATGTTCATAGTCAAACCACACATCATGGGTTATGCTGTAAAATAGATTCTGTCTCATTAGCTTTGTCGTAAGCTTGCCTCACAACCAGTGCATGAATATGACAAGCAGTTAATGCCTCTCCTTGCCTTTTGTAATATGATTGAACACCAGTGATCGCCAGCCAATTTAAtactaattttatttttgtattaaaaaaactTTGGTCTTTGTGTTTTGTAAAGACACATTGACACCTTGATTAAAACCATTACATAGACAGCACACAATACTCACTTTGTATGCAGTTTAAgtgaaaaacatgtttaatctTCTATTCGTCATTTCCCATCTCCAAGTTTTTGCTGATAAATCAATATGATACTGCCATAGGGAATTTCTGCCATCAGTGTTTATGTGTGCTGCTGCTAGATTCATTTCATTGACATGACTGTTGtgttaataaaaacatatttttagctGTTA

Function

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796279.1 True 1284 mRNA 0.44 2 15453193 15455490

Neighbor

gene id symbol gene type direction distance location
si:dkey-195m11.8 LOC103376590 coding upstream 77581 15359663 ~ 15375612 (+)
slc4a8 LOC104954932 coding upstream 103930 15318249 ~ 15349263 (+)
LOC120557984 bhlhe40,LOC103376587,LOC101063749 coding upstream 146591 15302830 ~ 15306602 (+)
LOC120557980 LOC103376586 coding upstream 154709 15214633 ~ 15298484 (+)
LOC120557981 LOC103376584,LOC104955004,LOC108235576 coding upstream 245174 15197507 ~ 15208019 (+)
LOC120556642 mettl7a,LOC102782606,LOC101484749,LOC103385978,LOC103147640 coding downstream 117 15455607 ~ 15456964 (+)
LOC120556683 LOC102785850,LOC100702077,LOC102299981,LOC103376602,LOC102207065,LOC102237428 coding downstream 151192 15606682 ~ 15626045 (+)
smarcc2 smarcc2,LOC102786132 coding downstream 175862 15631352 ~ 15643555 (+)
endou endou,LOC102787429 coding downstream 202041 15657531 ~ 15661996 (+)
LOC120557865 LOC103376609,LOC103465378 coding downstream 221377 15676867 ~ 15709140 (+)
G38738 scn8a,LOC106518053,LOC106572732,LOC103465359,LOC108440919 non-coding upstream 55686 15396729 ~ 15397507 (+)
G38670 NA non-coding upstream 202260 15250569 ~ 15250933 (+)
G38538 NA non-coding upstream 476289 14915678 ~ 14976904 (+)
G38526 NA non-coding upstream 589086 14863322 ~ 14864107 (+)
G38495 NA non-coding upstream 738676 14712784 ~ 14714517 (+)
G38762 NA non-coding downstream 6811 15462301 ~ 15463452 (+)
G38788 espl1 non-coding downstream 86763 15542253 ~ 15543372 (+)
G38829 NA non-coding downstream 170821 15626311 ~ 15626840 (+)
G38832 NA non-coding downstream 188571 15644061 ~ 15644399 (+)
G38852 NA non-coding downstream 218489 15673979 ~ 15755059 (+)
calcoco1b LOC104959845,LOC103376572 other upstream 578734 14865059 ~ 14874459 (+)
znf740a LOC107385642,LOC101469799,LOC102214350,LOC102304359,LOC103376569,LOC107082105,LOC100709046 other upstream 596124 14765297 ~ 14857069 (+)
G38517 NA other upstream 636757 14808352 ~ 14816436 (+)
cdk4 LOC107684003,LOC107701179 other upstream 695834 14740609 ~ 14757359 (+)
LOC120557952 mettl21b other upstream 1115433 14335160 ~ 14337760 (+)
G38834 NA other downstream 190021 15645511 ~ 15647851 (+)
crbn crbn,LOC102793823 other downstream 467831 15923321 ~ 15937097 (+)
ccdc174 ccdc174 other downstream 509912 15965402 ~ 15974237 (+)
eefsec eefsec,LOC102787825 other downstream 594188 16049678 ~ 16060330 (+)
LOC120557902 rab7,rab7a,LOC102230535,LOC106583206,LOC105017191,LOC101061812 other downstream 693635 16149125 ~ 16158362 (+)

Expression


Co-expression Network