si:dkey-195m11.8 (LOC103376590)


Basic Information

Item Value
gene id si:dkey-195m11.8
gene name LOC103376590
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 15359663 ~ 15375612 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796289.1
AGCAAGGAGTGTAGGAGAGTAGGAGGGTCCCAGAAGAGAGCACaagcctctcacacacacaaacacacacacacgctcacactcacacataaacaTTTACGTTGGCTCCTCTGTTGTACTTTGTGGAATAGTGGATTACTTTCCTAACTGAACCACTCATCGAGCTAATCCAGGCACGATCAGGTGGCAGTGTGTCGGAGCGGTGTTGAACTGTGAAATGAACCATGAAGGGGTCCAGCAGGCCAGTCACTAGCCGAGCCAACAGCCACACAACCACCAGCAGCAAGAGAAGCAGTAGCCCGGGGAGGCCCCGCAGCATGCAGCTGGGCCCTCACTAGCACCAAGTGGACCCGGTCCTCTCCTCTTTACCTGGGGCCAGGGCTGCAGAATGCTCAGTCCTGTCACCCCATACAGTCTGTTGAAGATGCACTGGTCCCCGGAGCACGCCGCCCCCTTATCTCAGTGGCCTGAGCAGCACCTAGATGTCACCTCTACTACCTCGCCGCCGTCTGCCCACAAACACGACCCCTATGCTACGGCTGGTCGCCGTAGCTATGCCCCTGCAGGTTACCCTTGGGCAAGTGATGACATATCAGCCCTTACTGCTTCTTCTCTGCTCAAACGCTACGCTGAGAAGTACTCGGGCTTGGAGCTGTCCTATGAACGCCCTCCTACAGGGGCCTACTCAGAGCCTGGAGCTTTCCTGAAAGCTGAATCTGAGCCATGGGCACTGGGTCAGGGCATGGAGTGTTATCCTGGAATGGAGGCATTAACTGGCACCAAGGTGGGCTCTGCATCTGTGGGCATCCCAACCACAGGAAGTGTGACAGTAGTGAGCAGTAACTTGGCCTCTGAGCCAGGCTACAGTGGCGCTGGCTCCTGCAGTGCCCCGTCATCTCAGGAATACCATCCTGCCTACAACAGCACCTACCTGTCCTCAGGATACTGCCCTCAGCCCAGCGCAGCACTTCCCCCTGCCCCTCTACACTCTTTGCAGGCCGCACCCACTCTGGTGCCCAGCTACAGCGCCAGCACTCCTGTCTACAACTACCCTCCAGGGTGCTACCCCCAAACAAGCCTGTCTTCTGGATACAGCCACCCCAGTGCCTCCTACCTGCCCCCTGGGATTAGCGCCCCCACTCCTCTGGCCCCTAGGCCCACCATGGTGGGGGGCAATTACAGCTACCCATCTCACAGCCTTGGAGGGAGCTCCGAGGGAGGAGTGCCACTGAAACGCAAGGCCTTTGAGATGGCAGAGGAAggacaggagggaggagaggtggACGGATCGCGCTACAGAAAGTATAGCAACGGCCATGGAAACAGTCACAGCAAAGGTCACGGCAATGGCTACGATATGAGCGGCTCGACCTCAGACCCGCAGGCCTACAAACCTGGAAAGCCCATGATGTCACCCCCTTATGGCGGGGCAGGGGACTACAGCCCACCATCAGGCCAAGCAGGAGAGAGTGTGTCAGGGGAGCACAACTTTCCTCAGCAACAAAGAATGTCTATGAAGATACCTGCATCGCACACAGGATCTGAGGACCCCACTGCAGGGCGCTGACAACACTGGTCGGCATTTGAGAGGATTCTCTCACTCTTTGAAACCAACCAGGGTTCTTAATCCAGACAGATTAAGGGGGAAAAAGGTTTAATTTCAGTAGTGAACAACAAGAGGGCACAAGACTGGTATTTCTTGTGCATCCtttaacattttcattattcatgtttttccaAAGATTCAAAGGGACATTTTGCCATGTAAGGTTGAGGTAAGTTTTAGGGGTGAGGTTAAAGAATTCTCTACATAGATAGCGTTAAGACAGTCCAAACGTATGAGTGTCTGTTTCTCTCAGGATCCTATTTATTTCCTTTCTGctactgcagcagcagcactgcaaCGTTGCTGTTTTAGACGTTGGTGTAATTATTTTTGGCCATTATGTATGTAAAAGGCCTTTGACTGCAATACGTTCTACCACACCACAAAAATCATTACCGACCAAAAAGTAAGGAGAGCAATAACTGAAATGGTGAGATTGCCATACTACTTCAGCACAATCACTGCTACTTTACACAGCTTACTCTCCGGCTCGGTGTGGCCTCGAGAAATGAATGTTTCCCTGCTCATCCCTCGCTTTCCCCAACCTTTACTCAttcttgactttttttcagtttcctttACCCCTTCTTTTCATGTTCTTTATCTTATTCTATCCCGGTGTCCTGCTTCTTGTTCTCATCCTTTTTCATTGCTGcaacaacttttgtttttgtccagTTTATACATAACAAGCTGCTTATCAAatgactacattacattatacatGAAGCCACCCTTGAAAATAGTTTTGAGAAAGATTGGGAAAATAATCTAAGATTTTAggttcatttaaaaatgtatttagcaTTCACACAATGACAACATTTGAGTATTTGCAGATCATCTTCAAAGCTTGTTGTTTACCCGCAGATTTTTGCTGATCCAGAAACTAACAGGTATATTTTCTCAAGAATCTGCGAATAATGGCGCAGCTTACACCTATAACAGTCAAACTATTACATTAAATAATGACTATACAGATctacaaaacaaccaaaaaa

Function

NR:

description
PREDICTED: fidgetin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796289.1 True 2607 mRNA 0.50 3 15359663 15375612

Neighbor

gene id symbol gene type direction distance location
slc4a8 LOC104954932 coding upstream 10400 15318249 ~ 15349263 (+)
LOC120557984 bhlhe40,LOC103376587,LOC101063749 coding upstream 53061 15302830 ~ 15306602 (+)
LOC120557980 LOC103376586 coding upstream 61179 15214633 ~ 15298484 (+)
LOC120557981 LOC103376584,LOC104955004,LOC108235576 coding upstream 151644 15197507 ~ 15208019 (+)
si:dkey-28n18.9 LOC103376583,LOC102799394,LOC100705573,LOC104955032 coding upstream 193936 15159592 ~ 15165727 (+)
LOC120556644 NA coding downstream 77581 15453193 ~ 15455490 (+)
LOC120556642 mettl7a,LOC102782606,LOC101484749,LOC103385978,LOC103147640 coding downstream 79995 15455607 ~ 15456964 (+)
LOC120556683 LOC102785850,LOC100702077,LOC102299981,LOC103376602,LOC102207065,LOC102237428 coding downstream 231070 15606682 ~ 15626045 (+)
smarcc2 smarcc2,LOC102786132 coding downstream 255740 15631352 ~ 15643555 (+)
endou endou,LOC102787429 coding downstream 281919 15657531 ~ 15661996 (+)
G38670 NA non-coding upstream 108730 15250569 ~ 15250933 (+)
G38538 NA non-coding upstream 382759 14915678 ~ 14976904 (+)
G38526 NA non-coding upstream 495556 14863322 ~ 14864107 (+)
G38495 NA non-coding upstream 645146 14712784 ~ 14714517 (+)
G38496 NA non-coding upstream 647529 14710726 ~ 14712134 (+)
G38738 scn8a,LOC106518053,LOC106572732,LOC103465359,LOC108440919 non-coding downstream 21117 15396729 ~ 15397507 (+)
G38762 NA non-coding downstream 86689 15462301 ~ 15463452 (+)
G38788 espl1 non-coding downstream 166641 15542253 ~ 15543372 (+)
G38829 NA non-coding downstream 250699 15626311 ~ 15626840 (+)
G38832 NA non-coding downstream 268449 15644061 ~ 15644399 (+)
calcoco1b LOC104959845,LOC103376572 other upstream 485204 14865059 ~ 14874459 (+)
znf740a LOC107385642,LOC101469799,LOC102214350,LOC102304359,LOC103376569,LOC107082105,LOC100709046 other upstream 502594 14765297 ~ 14857069 (+)
G38517 NA other upstream 543227 14808352 ~ 14816436 (+)
cdk4 LOC107684003,LOC107701179 other upstream 602304 14740609 ~ 14757359 (+)
LOC120557952 mettl21b other upstream 1021903 14335160 ~ 14337760 (+)
G38834 NA other downstream 269899 15645511 ~ 15647851 (+)
crbn crbn,LOC102793823 other downstream 547709 15923321 ~ 15937097 (+)
ccdc174 ccdc174 other downstream 589790 15965402 ~ 15974237 (+)
eefsec eefsec,LOC102787825 other downstream 674066 16049678 ~ 16060330 (+)
LOC120557902 rab7,rab7a,LOC102230535,LOC106583206,LOC105017191,LOC101061812 other downstream 773513 16149125 ~ 16158362 (+)

Expression


Co-expression Network