wdr77 (wdr77,LOC102777617)



Basic Information


Item Value
gene id wdr77
gene name wdr77,LOC102777617
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 17001174 ~ 17004437 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039796365.1
ACCATAAactcaaaaagaagaagagtccGAGCAGGAAGTGTCTGTACTGTCTATGGGTCCCATGCATGTTTTGCTCTTCGGTATTCACTCACtcgttcattcattcttagaaaAGTTAGCTACATTTTAGCTAAAGTAAGCTAACGTATTAGCTATCTTTCACTAATAAGCCAAAGACAAAAACCGTGTTTTCTCTGCAAGCAAACAGCAACAGCTAGCTGGCTAACGCCCACATCGCGCTAACGTTGTTTGGAAAATTACTGCTGTAGCCATTGTGAAAGTGAGTTATCTGAATGAAAAGTGCAGTTGATACTAACATGGTGAAGGAAAACCGATGGAACATACCCCCCAATGCTCCAGCGTGCATGGAGAAGCATCTAAGCTCAGCGCAATACAGAGCAGATGGTACTCTGCTGCTTGGTGCCTCCAGCCTCAGTGGCAGGAGCTGGCAGGGTTCTGTTTGGATCTACAGTGACCCTAAGCAGGCTCCCAATGAGGAACTCTGCAAAGCCGGTGTGCAGACTGAGACTGGAGTCACAGATGTGAAATGGGTATCCGAAAAGGGTGTTGTTGTTGCATCAGACTCCGGTGCCCTGGAGCTCTGGGAACTGGCAGAGGATGAACGCCTACTGGTGAATCGCTTCACCAAACATGAGCACGACCACATTGTCACCACAGTGAGCCCAGTTACTGGCGCAAACGGTGCTGTCACTGGCAGCATGGACTGTCGAGTTAAAGTCTGGGATCTCAGTCAGGAGACTGCTGTCACTACCTACAATGTGCACACACAGCCAGTCAGTTGTGTTGCCTGCAGTCCTACAGACGAGTCTCTCTTCATCTCCTGTGGTCAAGATGGCCGTGTGCTGATGTGGGACAGGAGAAAGCCAAACAAACCAGCCTCAAGAATAGATGTAGAGTCCCCCTGCTGCTCGCCTACCACTGTAGCCTGGCACCCCCACCACAGAAGCACCATTGCTTTTGGTGATGAGCTGGGCAGAGTGACCGTAAAGGATTTCCTGGGAACAGAGCCTGCACGGGTTGAGAACGTCCACAGCCGCAGAGTTAACGGGCTCGCCTTCTCTACACATAGTGCCTCCTTGCTAGCCTCCATAAGTGATGATTGTTCCCTAGCGGTTATGAACTCTGAACTGCGAGAAATACTTAGAGATCGGCGACACCAGGACTTTGTCAAAGGTGTGTGCTGGCTCCATAATGCCTCCAACACTCTCACAACCGTAGGCTGGGATCACCTTGTGCTTCACCACACGGTGAATCCGGCTGCCGAAGCTCCCAACTCTTCCTCTTAGACCCAACAGATGCGCACACCCCTTGAATAGAACATGTTTTAAGAAAACTACTTTTCCCCCCTATTTTTGAGGGGTTCCATGTGTATCTAAAACGTTTTTTCTGTCAGTCAGAAAATATGGATTAAAGTGTTTCATTGTCATTTAGTACTCCAGATATGTGCAGAATAGTTGGACTTTTGCTCTCCCTGTCCTGGCCTTGGTGCATTTCTACTTTACTCTACGATTATGGTCTCCCTCTATCCACTTCCTTCATACTGTATAGCCTTTCCATGTGTAATTACACTTGAGGCAACCCATTTGTATTGCATAATTTTACATTAAATGTAACGTATGTTGAACATTAGGAGCATTTTGACACTTTGTGTTTCCTGGAATATACTATATGCTAACAACCAGTGTCAGAAATAATTATGGGCTACGGGCAAAATTGCCCATAATAAAGGCGTTTGCCACTATGAAACACA

Function


symbol description
wdr77 Orthologous to human WDR77 (WD repeat domain 77).

NR:

description
PREDICTED: methylosome protein 50

GO: NA

KEGG:

id description
K13221 WDR77, MEP50; methylosome protein 50

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039796365.1 True 1771 mRNA 0.47 10 17001174 17004437
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Neighbor


gene id symbol gene type direction distance location
LOC120557990 LOC103362904,LOC104928138 coding upstream 38549 16917821 ~ 16962625 (+)
LOC120557149 LOC104950923,LOC103362905 coding upstream 84611 16907842 ~ 16916563 (+)
thumpd3 thumpd3,LOC102800238 coding upstream 94350 16897070 ~ 16906824 (+)
cav3 cav3,LOC107093348 coding upstream 259662 16738036 ~ 16741512 (+)
LOC120557897 LOC104966248,LOC103368476,LOC102798401,LOC101469442,LOC105924440,LOC106583184 coding upstream 265868 16733386 ~ 16735306 (+)
LOC120558021 LOC103362897,LOC103385872,LOC104928123,LOC104950934 coding downstream 14513 17018950 ~ 17020740 (+)
irf6 irf6 coding downstream 23272 17027709 ~ 17032694 (+)
eps8l3a NA coding downstream 30282 17034719 ~ 17042813 (+)
LOC120558072 LOC103362892,LOC104950939 coding downstream 93260 17097697 ~ 17102777 (+)
LOC120557584 LOC104939527,LOC103362890,LOC102214906,LOC102790228 coding downstream 122958 17127395 ~ 17144727 (+)
G39210 NA non-coding upstream 177918 16818746 ~ 16823256 (+)
G39197 NA non-coding upstream 215123 16785831 ~ 16786051 (+)
G39196 NA non-coding upstream 216109 16784748 ~ 16785065 (+)
G39195 NA non-coding upstream 218556 16782411 ~ 16782618 (+)
G39143 NA non-coding upstream 421452 16579085 ~ 16579722 (+)
G39302 LOC102778475,LOC101478284,LOC100692415 non-coding downstream 43498 17047935 ~ 17048365 (+)
G39304 LOC103362894 non-coding downstream 45360 17049797 ~ 17053951 (+)
G39308 NA non-coding downstream 76229 17080666 ~ 17082576 (+)
G39358 strip1 non-coding downstream 153466 17157903 ~ 17159236 (+)
G39427 celsr2 non-coding downstream 284002 17288439 ~ 17289516 (+)
G39116 NA other upstream 457594 16517536 ~ 16543580 (+)
G39104 LOC103385912,LOC104930488,LOC103358732,LOC101079922 other upstream 565945 16433238 ~ 16435229 (+)
LOC120557902 rab7,rab7a,LOC102230535,LOC106583206,LOC105017191,LOC101061812 other upstream 842812 16149125 ~ 16158362 (+)
eefsec eefsec,LOC102787825 other upstream 940844 16049678 ~ 16060330 (+)
ccdc174 ccdc174 other upstream 1026937 15965402 ~ 15974237 (+)
G39351 NA other downstream 107676 17112113 ~ 17119890 (+)
srsf3b srsf3,LOC104948713,LOC103465186,LOC102226051,LOC103150674 other downstream 188714 17193151 ~ 17198217 (+)
LOC120557637 minos1,LOC103357934 other downstream 367046 17371483 ~ 17377560 (+)
G39581 LOC104949003,LOC103357913 other downstream 603493 17607930 ~ 17609216 (+)
LOC120556838 NA other downstream 716004 17720441 ~ 17734011 (+)

Expression


wdr77(wdr77,LOC102777617) Expression in all Baseline Samples

Bar chart with 13 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 300.
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wdr77(wdr77,LOC102777617) Expression in each Bioproject

Bar chart with 8 bars.
wdr77(wdr77,LOC102777617) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1500.
End of interactive chart.

Co-expression Network