si:dkey-28n18.9 (LOC103376583,LOC102799394,LOC100705573,LOC104955032)


Basic Information

Item Value
gene id si:dkey-28n18.9
gene name LOC103376583,LOC102799394,LOC100705573,LOC104955032
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 15159592 ~ 15165727 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796381.1
TACTGACTAACACACCATTTAGTCATTCTTTTTCCCTGAGCCAGCACTTTAGATCTGGCACTGTTTTACTCCATTTCTTACAGGACCAGTGTGCACTTTGACCCAAAAGGATATCCTGTGCCTTCTCAGCATTTGGAGCAGGAGCGCTTTAAAGCCAACACAAAAAGATCTCTACAGCTTTATACACTTTTATCGGGATAAACAGAGATTTAAGCATTTCAAAGCTGATAAAAGACGGACTGGAATCATCAACTTACAAACTTGACAATGATGGAAGAAGTAAAAGAAGTGACATCTACTCTGAGTGTAGATCGTCATAACATCAATGTCACAGAGGTGTTGAAAGACGGGGACTCACTTACCTTCCTAATTGTATCTCAAAAGCTGTCTGGGACAGGGGAGTACCACGTGGCTCGGGCCTATGATGATTTTGAATGGCTGCAGCAGCACCTGTTCTCTCAGGAGGATGTACCCGGGATACAGGGAGTCATAtttcctcctcttcctgcaAAGGCTCAGGTGAATGCATCTGCCAAAGTTATGAAACAGCTTGGTTTCCTTGGTTTAGGAGAGTGGCAGCCGTACTGTAAAGCATTGGAAACCTTCCTCCGGCAGATTGCTGCACACAGCATACTCAGCAAAAATAAAGCTGTAGAGATTTTTCTGACCAGCTCAGACCCTCCAGGCAGACAGAGAGTtaggaaaaacattttcaaccgGCTGAGTCAAGCAGtggaagagaagaggaaagaaggcCATAAGGATGTGGATCAGTTCTTTCAAACTGAACGTGATCATAACCTTGTTCTTGCCGGCTGTGCCAAGACTGCAGCTGAGAGATTCCTGGATGTGGTGCAAACTGAGCAAAAAATAGCAGTGGCCTGTGGTCACTTCTCAGCTGCTCTGCACCTCTGTGTGGAACCAGGGGAAGACTCTGACAAACAGGCTTTCTCTAAGGCTTGTGTGAAATTATCAGAAGTCTTTGATTCTATGAAGAAAAATATGACAAGTGTCGCTGAGAACAACGTGAGCACTCTTGGGCTAGGCCTGGACCTGGAGTCACGCTACCAGGAGGCAGAAAAGGAGATGCTCTTCAGGAGAACCTGTAAACTAGTGGAGTTAGAGTCTGCCAGAAGGAATGCAGAGAAAGCCAAGCCTGTAAAGAAGGCTGCTATGGAGGAGGTGAAGAAAGCAGCAGAGACGGAGTTTGATCACATTTGTGGAGTGGCTAAGCAGGAGATTGCACGGTTCCAAGGTGCGCGTGTGGAAATGTTGCAGCAGGCTCTGGTTCAGTGGTGTGAAAAGCAGCTGCTTACAGCCAAAGAAAGTGCTGAGCAGTTCAACCAGCACCTGCAAGCCTTAAGAGGGATGGCCTAGTGACCTATCTCTTAATGAAGCATCCTCAGTATGTCTAAACATAGCATGGGATAACCCAAACGTGTCCTTCACCCTGTTGTGCTGTATTCTGATGCTAGTGGATTCAATTACATCctgtgtaaataaagaaatgtatgTGAAAGGGAAACCTTCCTGATTATCAAACAGCATCCATATAATTTGTACACATATTTACTTTGCCTCGGTCTCTCCACAATCATACTCCTATACCAATAAAGCCCCTATAGAAATTA

Function

NR:

description
uncharacterized protein LOC110528190

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796381.1 True 1631 mRNA 0.45 14 15159592 15165727

Neighbor

gene id symbol gene type direction distance location
LOC120556705 NA coding upstream 194 15157708 ~ 15159398 (+)
LOC120556827 LOC103376578 coding upstream 41434 15019473 ~ 15118158 (+)
faim2b LOC103376611,LOC101076527,LOC100707431,LOC101467547,LOC102195132 coding upstream 190131 14965707 ~ 14969461 (+)
LOC120556996 LOC104963001,LOC100707699,LOC101468050,LOC103376574,LOC102797035,LOC102310016,LOC102194854 coding upstream 197250 14952322 ~ 14962342 (+)
smug1 smug1,LOC102792633 coding upstream 297816 14857461 ~ 14861776 (+)
LOC120557981 LOC103376584,LOC104955004,LOC108235576 coding downstream 31780 15197507 ~ 15208019 (+)
LOC120557980 LOC103376586 coding downstream 48906 15214633 ~ 15298484 (+)
LOC120557984 bhlhe40,LOC103376587,LOC101063749 coding downstream 137103 15302830 ~ 15306602 (+)
slc4a8 LOC104954932 coding downstream 152522 15318249 ~ 15349263 (+)
si:dkey-195m11.8 LOC103376590 coding downstream 193936 15359663 ~ 15375612 (+)
G38538 NA non-coding upstream 182688 14915678 ~ 14976904 (+)
G38526 NA non-coding upstream 295485 14863322 ~ 14864107 (+)
G38495 NA non-coding upstream 445075 14712784 ~ 14714517 (+)
G38496 NA non-coding upstream 447458 14710726 ~ 14712134 (+)
G38449 NA non-coding upstream 468967 14642932 ~ 14690625 (+)
G38670 NA non-coding downstream 84842 15250569 ~ 15250933 (+)
G38738 scn8a,LOC106518053,LOC106572732,LOC103465359,LOC108440919 non-coding downstream 231002 15396729 ~ 15397507 (+)
G38762 NA non-coding downstream 296574 15462301 ~ 15463452 (+)
G38788 espl1 non-coding downstream 376526 15542253 ~ 15543372 (+)
G38829 NA non-coding downstream 460584 15626311 ~ 15626840 (+)
calcoco1b LOC104959845,LOC103376572 other upstream 285133 14865059 ~ 14874459 (+)
znf740a LOC107385642,LOC101469799,LOC102214350,LOC102304359,LOC103376569,LOC107082105,LOC100709046 other upstream 302523 14765297 ~ 14857069 (+)
G38517 NA other upstream 343156 14808352 ~ 14816436 (+)
cdk4 LOC107684003,LOC107701179 other upstream 402233 14740609 ~ 14757359 (+)
LOC120557952 mettl21b other upstream 821832 14335160 ~ 14337760 (+)
G38834 NA other downstream 479784 15645511 ~ 15647851 (+)
crbn crbn,LOC102793823 other downstream 757594 15923321 ~ 15937097 (+)
ccdc174 ccdc174 other downstream 799675 15965402 ~ 15974237 (+)
eefsec eefsec,LOC102787825 other downstream 883951 16049678 ~ 16060330 (+)
LOC120557902 rab7,rab7a,LOC102230535,LOC106583206,LOC105017191,LOC101061812 other downstream 983398 16149125 ~ 16158362 (+)

Expression


Co-expression Network