LOC120556705


Basic Information

Item Value
gene id LOC120556705
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 15157708 ~ 15159398 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796382.1
TTTAGAAATAGCAGCTGTGGCAGAGGTTTCATTTGATACACTTTTACCACCACGTTTTGTTGTCTGTCGGCTCAATAGGCGTCTCGAAACTGTCAGCCGAGTCAAAGTAAACTACTCTGTGCCTCGGGTTGGACAGATAGCATACAGGCCTGCTGAGTGCTGACGTGTAGCCGTATGTAGCCTATGAACATGAGCTGTCAAACCGCAAGATAGCTGTACCAGATAACTTCTTTGTGTTAACAGTGGTGTCTAAGTTCCTCCTCTGTGCTCAGAGACGCCAGCATGGCAGTGCAAGGTGTTTTCCACTGGATGCAAGCCTGCGTGGTCCTGCTGCTCTGCTTATCCATAGCCCTGCCTGCTGCCTCACAGTCGATCAGAAATTACTATGATACTCTCAATGTTGAGCCAGCAGCAACTGACAGCCAGGTAAAGAAGGCTTTCCGCAAACTGGCCGTAAAATACCACCCAGATAAGAACAAAAGCGCCGATGCAGAGAAGACTTTCAGAGAGATAGCTGAAGCCTACACCGTGCTCTCCAACAAGGAGAAGAGGAGGCTGTATGACAGTGTGGGCCATGAGGCTTTCCTAAAAAATGAGGCTCCTGTTGACCCTGAGGATGAACATGATGAGACAAGCTTCCACTTCGGTTTTGAAGACCTCTTCCATGACTTCGATGATAGTCCCTTTGTGGAGGAGTCATACTTCCACTGGAGCTTTCATCAGGATGGGGAGGATGAGAATGGGCCATATGAACATTACACTTATGAAGGGCCTGgtttcagcttttattttggcGATGAggatgaaaatgaagaaaaccaCTACTAGCTACTAAATGTCCTCTGTATTGTGTTAATGTATtgtctttaaaaataaagtctCCATGTTGAATTGTTA
>XM_039796383.1
CTTTAGATTCAGGTTCTTCCTCTCCGTTTAATCTGTGCTTTTCTGTCCTCTAGTGGCGATAGTGTTAAATTGCACTGTAGTATGTTTtctcactgtttttttaatctttcttttcttttctttttaccggGAATTCATTAATACGCGGCTTAAAGGTGTAACAGAATACAGTATGGAGGCAGTCCAATCGCTAAACGACGTGGTGTCTAAGTTCCTCCTCTGTGCTCAGAGACGCCAGCATGGCAGTGCAAGGTGTTTTCCACTGGATGCAAGCCTGCGTGGTCCTGCTGCTCTGCTTATCCATAGCCCTGCCTGCTGCCTCACAGTCGATCAGAAATTACTATGATACTCTCAATGTTGAGCCAGCAGCAACTGACAGCCAGGTAAAGAAGGCTTTCCGCAAACTGGCCGTAAAATACCACCCAGATAAGAACAAAAGCGCCGATGCAGAGAAGACTTTCAGAGAGATAGCTGAAGCCTACACCGTGCTCTCCAACAAGGAGAAGAGGAGGCTGTATGACAGTGTGGGCCATGAGGCTTTCCTAAAAAATGAGGCTCCTGTTGACCCTGAGGATGAACATGATGAGACAAGCTTCCACTTCGGTTTTGAAGACCTCTTCCATGACTTCGATGATAGTCCCTTTGTGGAGGAGTCATACTTCCACTGGAGCTTTCATCAGGATGGGGAGGATGAGAATGGGCCATATGAACATTACACTTATGAAGGGCCTGgtttcagcttttattttggcGATGAggatgaaaatgaagaaaaccaCTACTAGCTACTAAATGTCCTCTGTATTGTGTTAATGTATtgtctttaaaaataaagtctCCATGTTGAATTGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796382.1 True 897 mRNA 0.46 2 15157917 15159398
XM_039796383.1 False 854 mRNA 0.44 3 15157708 15159398

Neighbor

gene id symbol gene type direction distance location
LOC120556827 LOC103376578 coding upstream 39550 15019473 ~ 15118158 (+)
faim2b LOC103376611,LOC101076527,LOC100707431,LOC101467547,LOC102195132 coding upstream 188247 14965707 ~ 14969461 (+)
LOC120556996 LOC104963001,LOC100707699,LOC101468050,LOC103376574,LOC102797035,LOC102310016,LOC102194854 coding upstream 195366 14952322 ~ 14962342 (+)
smug1 smug1,LOC102792633 coding upstream 295932 14857461 ~ 14861776 (+)
LOC120557243 agap2 coding upstream 379813 14757839 ~ 14777895 (+)
si:dkey-28n18.9 LOC103376583,LOC102799394,LOC100705573,LOC104955032 coding downstream 194 15159592 ~ 15165727 (+)
LOC120557981 LOC103376584,LOC104955004,LOC108235576 coding downstream 38109 15197507 ~ 15208019 (+)
LOC120557980 LOC103376586 coding downstream 55235 15214633 ~ 15298484 (+)
LOC120557984 bhlhe40,LOC103376587,LOC101063749 coding downstream 143432 15302830 ~ 15306602 (+)
slc4a8 LOC104954932 coding downstream 158851 15318249 ~ 15349263 (+)
G38538 NA non-coding upstream 180804 14915678 ~ 14976904 (+)
G38526 NA non-coding upstream 293601 14863322 ~ 14864107 (+)
G38495 NA non-coding upstream 443191 14712784 ~ 14714517 (+)
G38496 NA non-coding upstream 445574 14710726 ~ 14712134 (+)
G38449 NA non-coding upstream 467083 14642932 ~ 14690625 (+)
G38670 NA non-coding downstream 91171 15250569 ~ 15250933 (+)
G38738 scn8a,LOC106518053,LOC106572732,LOC103465359,LOC108440919 non-coding downstream 237331 15396729 ~ 15397507 (+)
G38762 NA non-coding downstream 302903 15462301 ~ 15463452 (+)
G38788 espl1 non-coding downstream 382855 15542253 ~ 15543372 (+)
G38829 NA non-coding downstream 466913 15626311 ~ 15626840 (+)
calcoco1b LOC104959845,LOC103376572 other upstream 283249 14865059 ~ 14874459 (+)
znf740a LOC107385642,LOC101469799,LOC102214350,LOC102304359,LOC103376569,LOC107082105,LOC100709046 other upstream 300639 14765297 ~ 14857069 (+)
G38517 NA other upstream 341272 14808352 ~ 14816436 (+)
cdk4 LOC107684003,LOC107701179 other upstream 400349 14740609 ~ 14757359 (+)
LOC120557952 mettl21b other upstream 819948 14335160 ~ 14337760 (+)
G38834 NA other downstream 486113 15645511 ~ 15647851 (+)
crbn crbn,LOC102793823 other downstream 763923 15923321 ~ 15937097 (+)
ccdc174 ccdc174 other downstream 806004 15965402 ~ 15974237 (+)
eefsec eefsec,LOC102787825 other downstream 890280 16049678 ~ 16060330 (+)
LOC120557902 rab7,rab7a,LOC102230535,LOC106583206,LOC105017191,LOC101061812 other downstream 989727 16149125 ~ 16158362 (+)

Expression


Co-expression Network