LOC120556737


Basic Information

Item Value
gene id LOC120556737
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 41963364 ~ 41987577 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796451.1
ATGTGGTGCTCACACACTTTCACCTGGAGGAATCCGCGATGGTCGCCGGCCGGGCGGACAAAACAGCTTCCCCTGAGTGAGTTCAGCTACAGGACAGAGAAGTGGAAAACTGAACAACCTGCTGACACTCCAAACACTGAAGctTCACTCGAAGAAAAAATGGATTCCAGATTAGAGGTAGATCTTTGCTGTCCGGTCTGTCGTGATGTCTTCAGAAACCCTGTTTTTCTCTCatgtagccacagcttctgtGAAGACTGTCTGCAGAGCTGGTGGAGAGAGAACCCAACACAGGAGTGTCCAGTCTGTAAGACAACATCCTCAAATGCAAAACCGCCTTGTAACTGGGTGTTAAAGAACCTGTGTGAGGCCTTCTTACtggagagagatcagagagcttcagaggctctctgcagtctgcactctgagaaactcaaactcttctgtctggaccatcagcagccagtgtgtCTCATCTGCAGAGATTCAGAAAAACACATCGACCACAAATTCAGACCCGTCGATGAAGCTGCACGACAACACAGGAAGGAGCTTCAGGAAACTCTGGAGCCCTTAAAGGAGAAGTTAAAGGTTTTTGAAGAAGTTAAAGAGGAGTGTGATCAAATGGCAAAACACATAAAGCTCCAGGCGCGACGCACAGAGTCACGGATCAAGGATCAGTTTAAGAAGCTTCACCAGTttctagaagaggaagaggtggccaggttggctgcactgagggaggaggaggagcagaagagtcagaggatgaaggagaagatggaggcactgagcagagagatagcagcactttcagacacagtcagagccacagaggagcagctgagagctgaacacgcctcattcctgatcaactacaaggctgcagtggaaagagtccagcagcgccccctgctggatgatccacagctgctctcaggagctctgatagacgaggccaaacacctgggcaacctgagcttcaacatctggaacaagatgaaggacatggtctcctacactcctgtgattctggacccaaacactgctgGTCCATTAAACGGCCTGTCTGAAGATCTGACCAGTGTGAGAGTAGGAGAGGAACAGCTTGATCTTGataatccagagaggtttgataaACACCGCTTTgtcctgggctctgagggctttaactcagggactcacagctgggatgTCAATGTTGGAGACAGTACAGGCTGGTCACtgggtgtgttagcagagtctgTCCAGAGGAAGGGAAGCATAGAGTCTGGATTATGCAGAATAGGGTTCTATCAAGGTAAATACTCATGGTCAGATCCAGCCACTGTTCTCGTAGTGCAGCCAGAGGTCCAGAGGATcagagtgactctggactggaacagaggaaagctgtcgttctctgatgctgatactaacacacacattcacaccatcacacacactttcactgagaagATGTTTCCATTATTTACCAGTTGGGATAAAGTCCCACTGAAGATATCACcagtgaaggtgtgtgtgacagtggagCAGAGCAGTTAGAGATAAAGAGGATGATTATATTAATGATGTTTATTTCTTAACCTTTGTGTTATCCTTGATTTTTTCAGAAATATTGGTTTtgttcaaccaaattgcccaaaaataacttggatgcatggATGCCTGctaatccagagaggtttgacatATACTGCTCTGTCCTGGGCTCGGAGGGCTTTAACTTTGggactcacagctgggatgTCAAGGTTGGAGACAGTCTGGTCACTGGCTGTGTTAGAGCGGTCTGTCCTGAGGGAGGGATTTGTACAGTCTGGCTTATGGAGAATAAGGTACTATTTAGGTAGATACGCAGCACAGTCGCCAGTAGATCCATCTGTTACTCTCATAGTGCAGGAGAAGCTCCAGAGGATcagagtgactctggactggaaCGCACAAGAGCTGTGTTCTCTGATGCTGATACCAACACACACTTACCACCCTTTCACTGAGAGGACGTTTCCAGTCATTTTCACTGGGGATAACGTCCCAGTGAAgatattaaaagtaaatgtgCATGTGATAGTGGATGACAACATTTAGAGATAAACAGGATGATTCAtttgatgtttatttcttcaGTGGAATTTCTTCATGATTACAAAGACATGTTAATTTCTATTTCACCTGATTGTTTAGttttaaaatctgcttttttatctattgttcatgttttaattattttgaaGAAAAGTTATATAAAGAAAAGTTATTCAAAAACTGCATGTTTAAGCAGCCAATCAGTGTTGAGATCAAGAAATATTAAACTCTAGTCGAGATTTAAGTTACGTTAAAATCAATGTTTAAATTCTTTTTGTATTTGATGTAATACAGAAGATGACTATGTTtctaaaagtgtttcattcagTTTCCATCAGTTCAATTCTGCTAATGTTGGTGATTTAAATAACATTAATGCTGAATGTACATTCATTCCTGTTTTTCaacaacataataaaacattgcCTT

Function

GO:

id name namespace
GO:0022402 cell cycle process biological_process
GO:0090304 nucleic acid metabolic process biological_process
GO:0010948 negative regulation of cell cycle process biological_process
GO:0044770 cell cycle phase transition biological_process
GO:0044772 mitotic cell cycle phase transition biological_process
GO:0007049 cell cycle biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0007093 mitotic cell cycle checkpoint biological_process
GO:0009987 cellular process biological_process
GO:0045930 negative regulation of mitotic cell cycle biological_process
GO:0006261 DNA-dependent DNA replication biological_process
GO:0010564 regulation of cell cycle process biological_process
GO:1901987 regulation of cell cycle phase transition biological_process
GO:1901988 negative regulation of cell cycle phase transition biological_process
GO:1901990 regulation of mitotic cell cycle phase transition biological_process
GO:1901991 negative regulation of mitotic cell cycle phase transition biological_process
GO:0044424 obsolete intracellular part cellular_component

KEGG:

id description
ko03030 DNA replication
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796451.1 True 2517 mRNA 0.44 2 41963364 41987577

Neighbor

gene id symbol gene type direction distance location
LOC120556746 LOC106676760 coding upstream 2194 41958293 ~ 41961170 (+)
LOC120557138 NA coding upstream 220207 41739325 ~ 41743157 (+)
LOC120556749 NA coding upstream 335175 41625207 ~ 41628189 (+)
LOC120557132 NA coding upstream 550743 41406543 ~ 41412621 (+)
LOC120556884 NA coding upstream 598350 41362503 ~ 41365014 (+)
LOC120556739 NA coding downstream 3830 41991407 ~ 41998401 (+)
LOC120556738 LOC106676760 coding downstream 20875 42008452 ~ 42012332 (+)
LOC120556744 NA coding downstream 25371 42012948 ~ 42014554 (+)
sdc4 NA coding downstream 505496 42493073 ~ 42518058 (+)
LOC120557014 NA coding downstream 556498 42544075 ~ 42556438 (+)
LOC120556755 NA non-coding upstream 6266 41939214 ~ 41957098 (+)
G45190 NA non-coding upstream 48061 41912164 ~ 41915303 (+)
G45193 NA non-coding upstream 105078 41855660 ~ 41858286 (+)
G45174 NA non-coding upstream 260287 41702634 ~ 41703077 (+)
G45119 LOC106676758 non-coding upstream 462273 41487332 ~ 41501091 (+)
G45229 NA non-coding downstream 180300 42167877 ~ 42170069 (+)
G45245 NA non-coding downstream 361677 42349254 ~ 42350755 (+)
G45247 NA non-coding downstream 424628 42412205 ~ 42412427 (+)
G45248 NA non-coding downstream 434031 42421608 ~ 42429476 (+)
G45253 NA non-coding downstream 480658 42468235 ~ 42479826 (+)
map1lc3a map1lc3a,LOC107551126 other upstream 51247 41905529 ~ 41912117 (+)
dynlrb1 dynlrb1,LOC106565026 other upstream 60733 41896995 ~ 41902631 (+)
G45186 NA other upstream 82997 41869730 ~ 41880367 (+)
LOC120557139 LOC106956008,LOC103153866,LOC103464266,LOC108411580,LOC102236494 other upstream 195051 41751003 ~ 41768313 (+)
LOC120557312 NA other upstream 1031981 40848815 ~ 40931383 (+)
G45237 NA other downstream 290708 42278285 ~ 42301895 (+)
rbm15b rbm15b,LOC102788268 other downstream 667211 42654788 ~ 42658388 (+)
G45557 NA other downstream 1850807 43838384 ~ 43838852 (+)
G45577 NA other downstream 1969250 43956827 ~ 43957173 (+)
G45635 NA other downstream 2373209 44360786 ~ 44468991 (+)

Expression


Co-expression Network