LOC120556744


Basic Information

Item Value
gene id LOC120556744
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 42012948 ~ 42014554 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796458.1
GGAAACAGTTCGTTTTTGGTCCTccctacagagagacacacaaactgaaaaCAGACGATCAGAAAACTACAACCCTGCTTGCTTCAACCTGCTGACACCACACACTGAAGAGACCAAATGGCTTCCAGATCAGAGGAGGATCTCTGCTGTCCGATCTGTCACGATGTCTTTAGAGATCCTGTTGTTCTGTCatgtagccacagcttctgtaaagACTGTCTGCAGAGCTGGTGGACAGAGAAACCAACACAGGAGTGTCCAGTGTGTACGAGAAGATCTTCAAGGGATCAACCACCTGTTAGTCTGGTGTTGAAGAACCTGTGTGAGGCCTTCTTACtggagagagatcagagagcttcagaggctctctgcagtctgcactctgagaaactcaaactcttctgtctggaccatcagcagccagtgtgtCTCATCTGTCTGcattcagaaacacactccAACCACAGAATCAGACCCATCGATGAAGCTGCACGACAACACAGGAAGGAACTTCAGGAAACTCTGGAGCCCTTAAAGGAGAAGTTAAAGGTTTTTGAACAAGTTAAAGGGAAGTTTGATCAGACAGCAGAACACATGAAGGTCCAGGCCCGACGCACAGAGACGCAGATGAAGGAGCAGTTTAAGAAGCTTCGCCAGTttctagaagaggaagaggaggccaggttggctgcactgagggaggaagaagagcaGAAGActcagaggatgaaggagaagatggaggctctgagcagagagatagcagcactttcagacacagtcagaaccacagaggagcagctgagagctgaagacgtctcattcctgatcaactacaaggctgcagtggaaagagtccagcagcaccccctgctggatgatacacagctgctctcaggagctctgatagacgaggccaaacatctgggcaacctgagcttcaacatctggaacaagatgaaggacatgGTCTCCTACACTCCTGTGATTCTGGATCCAAACACTGCTCATCCTTATCTCATCCTGGCTGAAGATCTGACCAGTgtgagacaaggagagagaaaggaccTTCCTGAaaatccagagaggtttgataaATGCTGGTTTgtcctgggctctgagggctttAACTCAGGGAGTCACAGCTGGGATGTCGAGGTTGGAGACAGTAAACGCTGGTCACTGGGTGTGTTAGCAAAATCTGtccagaggaagggagacaTAGAGTCTGGATTATGGAGAATAAAGTTATATGAAGGTAAATACTTAGCATCTTCACTACCAGCTCCACCCACTGTTCTCGTAGTGCAGAAGAAGCTCCAGAGGATCCgagtgactctggactggaacagaggaaagctgtcgttctctgatgctgatactgacacacacatacacaccttcacacacactttcactgagaagACGTTGCCATATATTGGCAGTCCTTATAAATTGAAGATATTACCACTGaaggtgtgtgtgacagtgtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796458.1 True 1494 mRNA 0.48 2 42012948 42014554

Neighbor

gene id symbol gene type direction distance location
LOC120556738 LOC106676760 coding upstream 616 42008452 ~ 42012332 (+)
LOC120556739 NA coding upstream 14547 41991407 ~ 41998401 (+)
LOC120556737 NA coding upstream 25371 41963364 ~ 41987577 (+)
LOC120556746 LOC106676760 coding upstream 51778 41958293 ~ 41961170 (+)
LOC120557138 NA coding upstream 269791 41739325 ~ 41743157 (+)
sdc4 NA coding downstream 478519 42493073 ~ 42518058 (+)
LOC120557014 NA coding downstream 529521 42544075 ~ 42556438 (+)
LOC120557143 NA coding downstream 584533 42599087 ~ 42601293 (+)
LOC120557144 NA coding downstream 587961 42602515 ~ 42615582 (+)
LOC120557750 NA coding downstream 602667 42617221 ~ 42630936 (+)
LOC120556755 NA non-coding upstream 55850 41939214 ~ 41957098 (+)
G45190 NA non-coding upstream 97645 41912164 ~ 41915303 (+)
G45193 NA non-coding upstream 154662 41855660 ~ 41858286 (+)
G45174 NA non-coding upstream 309871 41702634 ~ 41703077 (+)
G45119 LOC106676758 non-coding upstream 511857 41487332 ~ 41501091 (+)
G45229 NA non-coding downstream 153323 42167877 ~ 42170069 (+)
G45245 NA non-coding downstream 334700 42349254 ~ 42350755 (+)
G45247 NA non-coding downstream 397651 42412205 ~ 42412427 (+)
G45248 NA non-coding downstream 407054 42421608 ~ 42429476 (+)
G45253 NA non-coding downstream 453681 42468235 ~ 42479826 (+)
map1lc3a map1lc3a,LOC107551126 other upstream 100831 41905529 ~ 41912117 (+)
dynlrb1 dynlrb1,LOC106565026 other upstream 110317 41896995 ~ 41902631 (+)
G45186 NA other upstream 132581 41869730 ~ 41880367 (+)
LOC120557139 LOC106956008,LOC103153866,LOC103464266,LOC108411580,LOC102236494 other upstream 244635 41751003 ~ 41768313 (+)
LOC120557312 NA other upstream 1081565 40848815 ~ 40931383 (+)
G45237 NA other downstream 263731 42278285 ~ 42301895 (+)
rbm15b rbm15b,LOC102788268 other downstream 640234 42654788 ~ 42658388 (+)
G45557 NA other downstream 1823830 43838384 ~ 43838852 (+)
G45577 NA other downstream 1942273 43956827 ~ 43957173 (+)
G45635 NA other downstream 2346232 44360786 ~ 44468991 (+)

Expression


Co-expression Network