LOC120556749


Basic Information

Item Value
gene id LOC120556749
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 41625207 ~ 41628189 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796466.1
CGGAAGCATAAATATTGCAGCGCGGAAGGATACATGAGTGAATAGACAGTGATCCAACTGTCAGTCTCTGTCAGTGTCGATCAAAGTCGGGAGGATGGCGCTTGGACATTTATCCACGGAGGATTTAATCACGGAGTTACTTCGTTTTGGAGTAGAGGTCACTGAAGAGGAGAGAAGTAAATTCAAAGATAATGAAGTTGACGGAGAAGCAGTGGACTATGGATTGACTGAGAGGATGGTTTCATACCTCTTTGAAGGATCATTTAAGAAGCAAGCCAAATTCAACCGATTTGTTCAGCAGTGGAAAGAAACTGTGACACTAACCCTTGAGCCTGTCCCGGTACATTCAGAGAAGGCTACAGCGGAATCAAGTCATGCCATCCCATCATCAGCCTTCCCAGCAGTTTTCATCATTCCTAAATTTCCCAGAGATGTTCAGACAAAGTTGGACCAAAAACCGCCATGCAAAATTGAGAGATCCGATCACAACAAAATCATAAGAACATTGTATGAAACCATGGCCCTGATCAAAATGTTCCCGACCAATGATGACTATGTGAAAGTGTGCAAGGCCCTGATTTTGAAATACCCTTTCTTAAAGGACAAAGAAGGCAATGGTTATCATACCTGGCACATGTCTCTCAAACGTAAGTTCAAATATGAGCGGGTGCCGCTGATAGATGATGAGGAGGTGAGAAGAATGAAACTGAAATTTGGTCATCACAAAAAGCCTTTGCAACACgaagaaaacacaagcaaacgAGCCAAGACATCAAAGGTCAGAGCATCTTCTTTGGTTCGCTGTATAtctatgtgtgcatgttttacacacaagcagtgtggcccaatggttagcccCTTAACCCAGCATGGTAGAAAATAGTCCCCCCCCCCTGTAAAGTGCTTTAAGTAGc
>XM_039796467.1
TGCTAAAGCAAAGCCATTTGGGCGGAATGTGACTATCGGTAGCCAGTGAGGGTTTGAAATTATGATTTAGTCTTTATTTTGTCGTCAAACTGTCTTAGAGCATTTTTGTAAAACCATGTCGCTAAGACCAACCTTAAATTACAACACCAGTCGGGTTAACTGACAGAACCGACCAACTGTTAACCTCCCTTTCGAGTAATGTTaacgtttaacgttagctagctgcttttataaaaaataaaccgaTTACTATCATTAATGGGTTTAACTTCTTTCAATACTTTACCCGCTGTCCTGGAAAAAAAAGCAAGATAGGCCTAACGTTAcgttatattaatatattcaggtgtgtgcgtgtgagacaCACATTTCCAGCGTCTCCAATGAGATAATGAAGTTGACGGAGAAGCAGTGGACTATGGATTGACTGAGAGGATGGTTTCATACCTCTTTGAAGGATCATTTAAGAAGCAAGCCAAATTCAACCGATTTGTTCAGCAGTGGAAAGAAACTGTGACACTAACCCTTGAGCCTGTCCCGGTACATTCAGAGAAGGCTACAGCGGAATCAAGTCATGCCATCCCATCATCAGCCTTCCCAGCAGTTTTCATCATTCCTAAATTTCCCAGAGATGTTCAGACAAAGTTGGACCAAAAACCGCCATGCAAAATTGAGAGATCCGATCACAACAAAATCATAAGAACATTGTATGAAACCATGGCCCTGATCAAAATGTTCCCGACCAATGATGACTATGTGAAAGTGTGCAAGGCCCTGATTTTGAAATACCCTTTCTTAAAGGACAAAGAAGGCAATGGTTATCATACCTGGCACATGTCTCTCAAACGTAAGTTCAAATATGAGCGGGTGCCGCTGATAGATGATGAGGAGGTGAGAAGAATGAAACTGAAATTTGGTCATCACAAAAAGCCTTTGCAACACgaagaaaacacaagcaaacgAGCCAAGACATCAAAGGTCAGAGCATCTTCTTTGGTTCGCTGTATAtctatgtgtgcatgttttacacacaagcagtgtggcccaatggttagcccCTTAACCCAGCATGGTAGAAAATAGTCCCCCCCCCCTGTAAAGTGCTTTAAGTAGc

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796466.1 False 914 mRNA 0.44 5 41625207 41628189
XM_039796467.1 True 1114 mRNA 0.42 5 41625826 41628189

Neighbor

gene id symbol gene type direction distance location
LOC120557132 NA coding upstream 212586 41406543 ~ 41412621 (+)
LOC120556884 NA coding upstream 260193 41362503 ~ 41365014 (+)
LOC120557130 NA coding upstream 264853 41358141 ~ 41360354 (+)
LOC120557311 NA coding upstream 635287 40961708 ~ 40989920 (+)
LOC120557310 NA coding upstream 710953 40872849 ~ 40914254 (+)
LOC120557138 NA coding downstream 111136 41739325 ~ 41743157 (+)
LOC120556746 LOC106676760 coding downstream 330104 41958293 ~ 41961170 (+)
LOC120556737 NA coding downstream 335175 41963364 ~ 41987577 (+)
LOC120556739 NA coding downstream 363218 41991407 ~ 41998401 (+)
LOC120556738 LOC106676760 coding downstream 380263 42008452 ~ 42012332 (+)
G45119 LOC106676758 non-coding upstream 124116 41487332 ~ 41501091 (+)
G45095 smpd4 non-coding upstream 238144 41381222 ~ 41387063 (+)
G44758 NA non-coding upstream 319087 41305908 ~ 41306120 (+)
G44757 NA non-coding upstream 319426 41304778 ~ 41305781 (+)
G44751 NA non-coding upstream 548075 41045844 ~ 41077132 (+)
G45174 NA non-coding downstream 74445 41702634 ~ 41703077 (+)
G45193 NA non-coding downstream 227471 41855660 ~ 41858286 (+)
G45190 NA non-coding downstream 283975 41912164 ~ 41915303 (+)
LOC120556755 NA non-coding downstream 311025 41939214 ~ 41957098 (+)
G45229 NA non-coding downstream 539688 42167877 ~ 42170069 (+)
LOC120557312 NA other upstream 693824 40848815 ~ 40931383 (+)
LOC120557687 NA other upstream 956465 40666199 ~ 40668742 (+)
LOC120557674 NA other upstream 1077359 40519942 ~ 40547848 (+)
G44690 NA other upstream 1118637 40480676 ~ 40506570 (+)
LOC120557139 LOC106956008,LOC103153866,LOC103464266,LOC108411580,LOC102236494 other downstream 122814 41751003 ~ 41768313 (+)
G45186 NA other downstream 241541 41869730 ~ 41880367 (+)
dynlrb1 dynlrb1,LOC106565026 other downstream 268806 41896995 ~ 41902631 (+)
map1lc3a map1lc3a,LOC107551126 other downstream 277340 41905529 ~ 41912117 (+)
G45237 NA other downstream 650096 42278285 ~ 42301895 (+)

Expression


Co-expression Network