cers5 (cers5)


Basic Information

Item Value
gene id cers5
gene name cers5
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 24866174 ~ 24886029 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796531.1
CTCTGGTTTCCATCACACTGGTGCGAAGACGAAGAGAGTGTGAGGCAAGTCATCACCACAAGTGGCCCAGGGGCAGGGGAGGCTTTCATCAAGTTTCACACATCCTTTTCTTCCGGATATTAAACTAATTTAATCTAACTGTCCGGCGACTGGGGCACTGTTAAACATGGCTGCTCTTTCAGCCTGGTTCTGGAACGAGAGGTTTTGGCTCCCACACAACGTAACCTGGGCGGATCTGGCAGACCCAGCTCCCGGGGTGGAGTACCCCAAAGCTGGACACTTGTTCACTGCCTTGCCGCTGGCTTTGGGAATTTTCGCCGTCAGGATACTCTTCGAAAGGTTTATTGCCAGTACCTGTGCCCGGAGTCTTCACATCCAGCCAGGTGTTGGACGAAGAGCTCAGCCCAATGCAGTGCTGGAGAAGGTGTTTACATCCATCACCAAGAATCCAGACTCTCGCCATCTGGATGGCCTATCCAAGCAGCTGGACTGGGAGGTGCGAAAGGTCCAGCGTTGGTTCAGACACCGCAGGAACCAAGATAAACCCAGTACACACACTAAGTTCTGTGAGAGCATGTggaggtttacattttatttgtgcatttttACCTATGGGTTCCGGTTTCTGTGGCAGTATCCTTGGATGTGGGATACACGGCATTGCTGGTACGGTTATCCCTATCAGGTCATGACTCCGGGTCTTTACCGCTACTATGTGACAGAACTGGCCTTCTACTGGTCACTCATGTTCTCCCAATTCACTGACATTAAAAGGAAGGACTTCAAGATCATGTTCATCCATCACCTGGCGACAGTTGGCCTGATCAGCTTTTCTTACGTCAACAACATGACGCGAGTAGGGAGCCTCGTAATGTGTGTACACGATGCCTCTGACTTCCTGCTAGAGGCAGCCAAGCTGGCCAACTATGCCAAGTACCAGCGCTTGTGTGACTCCCTCTTCATTATGTTTAGTGTGGCCTTCTTCATCACACGACTAGTTATATATCCAGTATGGGTCCTGAACTCCACTATGTTTGAGAGCTGGGCCATAGTCGGGCCATACCCGTCCTGGTGGCTCTTCAACTTCTTGCTGCTGGTCCTTCAAGTTTTGCATATCATCTGGTTCTACCTCATAGCCCGTATAGCTGTCAAAGCCATGCTGCGGGGCAAGGTATGCAACGATGTACGCAGTGACATTGAGAGCAGCTCAGGGGAGGAGTCCAACACGCCCATAGAAGGCCCCAAGGCTTCTTTTCATACTCCCAAGGGAGAAAACGGCACTAACGGCCACTGTGCTTCTGCTAAAGCCCGAGGGCTGAACCACAGCAGCGGGTGACGCCCCCTGCAGTTCATCCCTCACCATGTCTCACCATGTCTCCAGAAACTGTCTTTTGACATTCCCTTGacgtgcaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactttggagAGCCCTGTACGACACAACTCAAGAAGTGACATGTAAACACTGAAATAATATGAAAAATCAGTTGCAGAAGGTGAGTTGCATAGCCTTACTTTTCAAATGATGGGAGTGTTCATGGGGAGTTTGGCTGCAGATGTTGATTAGTTTTAAATGTTCTCTCCCAGTTTTATTGGTCAGATGAACTTGATTATTTTTATCTTGTGGGTTGATTCACACCGGGTcacaaaaagcagaaaatacTACTCTGGAAGTGAGTTGCATTTCTGATCTGTGAGGTTACAGCAGGTATTATACATATAAATAACTGTATAAAGAACTATTGTTACAGCTGTGGTTTTATCAGCTCTTAAAAAGAAGGGCACCTGCTGAGTGTGTGACCAGAATAACACTCTGTACACtcttgaaagtaaaaaaagcaGCAGTTTCTGCCTTCTGCGATCTATTGTCGatttctccttttgaaaaacATTGTTTGGCAAATATGTGACTTAttgttttactttgtttttttttactaagtCTTATGAGACCAAATGTTTATGAAATTGTTTGTCACTGCCTATGGGAGATTCCAGGCATGAGGCCTATACTAAATGTCTGGTATCACGTTCTTACGTGAGGGCCTTGTAAAATAGATATTTACAAATATACTCTGTTGTGAAAGATG
>XM_039796532.1
CAGGATACTCTTCGAAAGGTCACTTCAAGACAAGGAAAAAGTGCTAAGAGGAAAAGCTGAGCCGATGATAAAACAAGGAGGACAAGAAGTGTGAGCAGTTTTCTGTCAGATGAAAGGTTTATTGCCAGTACCTGTGCCCGGAGTCTTCACATCCAGCCAGGTGTTGGACGAAGAGCTCAGCCCAATGCAGTGCTGGAGAAGGTGTTTACATCCATCACCAAGAATCCAGACTCTCGCCATCTGGATGGCCTATCCAAGCAGCTGGACTGGGAGGTGCGAAAGGTCCAGCGTTGGTTCAGACACCGCAGGAACCAAGATAAACCCAGTACACACACTAAGTTCTGTGAGAGCATTATCCTTGGATGTGGGATACACGGCATTGCTGGTACGGTTATCCCTATCAGGAAACGGCACAGAGCGTGAAAGCAGAAGCATTGTCATGACTCCGGGTCTTTACCGCTACTATGTGACAGAACTGGCCTTCTACTGGTCACTCATGTTCTCCCAATTCACTGACATTAAAAGGAAGGACTTCAAGATCATGTTCATCCATCACCTGGCGACAGTTGGCCTGATCAGCTTTTCTTACGTCAACAACATGACGCGAGTAGGGAGCCTCGTAATGTGTGTACACGATGCCTCTGACTTCCTGCTAGAGGCAGCCAAGCTGGCCAACTATGCCAAGTACCAGCGCTTGTGTGACTCCCTCTTCATTATGTTTAGTGTGGCCTTCTTCATCACACGACTAGTTATATATCCAGTATGGGTCCTGAACTCCACTATGTTTGAGAGCTGGGCCATAGTCGGGCCATACCCGTCCTGGTGGCTCTTCAACTTCTTGCTGCTGGTCCTTCAAGTTTTGCATATCATCTGGTTCTACCTCATAGCCCGTATAGCTGTCAAAGCCATGCTGCGGGGCAAGGTATGCAACGATGTACGCAGTGACATTGAGAGCAGCTCAGGGGAGGAGTCCAACACGCCCATAGAAGGCCCCAAGGCTTCTTTTCATACTCCCAAGGGAGAAAACGGCACTAACGGCCACTGTGCTTCTGCTAAAGCCCGAGGGCTGAACCACAGCAGCGGGTGACGCCCCCTGCAGTTCATCCCTCACCATGTCTCACCATGTCTCCAGAAACTGTCTTTTGACATTCCCTTGacgtgcaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactttggagAGCCCTGTACGACACAACTCAAGAAGTGACATGTAAACACTGAAATAATATGAAAAATCAGTTGCAGAAGGTGAGTTGCATAGCCTTACTTTTCAAATGATGGGAGTGTTCATGGGGAGTTTGGCTGCAGATGTTGATTAGTTTTAAATGTTCTCTCCCAGTTTTATTGGTCAGATGAACTTGATTATTTTTATCTTGTGGGTTGATTCACACCGGGTcacaaaaagcagaaaatacTACTCTGGAAGTGAGTTGCATTTCTGATCTGTGAGGTTACAGCAGGTATTATACATATAAATAACTGTATAAAGAACTATTGTTACAGCTGTGGTTTTATCAGCTCTTAAAAAGAAGGGCACCTGCTGAGTGTGTGACCAGAATAACACTCTGTACACtcttgaaagtaaaaaaagcaGCAGTTTCTGCCTTCTGCGATCTATTGTCGatttctccttttgaaaaacATTGTTTGGCAAATATGTGACTTAttgttttactttgtttttttttactaagtCTTATGAGACCAAATGTTTATGAAATTGTTTGTCACTGCCTATGGGAGATTCCAGGCATGAGGCCTATACTAAATGTCTGGTATCACGTTCTTACGTGAGGGCCTTGTAAAATAGATATTTACAAATATACTCTGTTGTGAAAGATG

Function

symbol description
cers5 Predicted to enable sphingosine N-acyltransferase activity. Predicted to be involved in ceramide biosynthetic process. Predicted to act upstream of or within lipid metabolic process. Predicted to be located in endoplasmic reticulum membrane and nucleus. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Is expressed in several structures, including EVL; digestive system; immature eye; intermediate cell mass of mesoderm; and periderm. Orthologous to human CERS5 (ceramide synthase 5).

NR:

description
PREDICTED: ceramide synthase 5-like

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K23727 CERS5_6, LASS5_6; sphingoid base N-palmitoyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796531.1 True 2195 mRNA 0.47 10 24866174 24886029
XM_039796532.1 False 1946 mRNA 0.46 11 24866495 24886029

Neighbor

gene id symbol gene type direction distance location
LOC120557580 gpd1,LOC102799081 coding upstream 2080 24859261 ~ 24864094 (+)
smarcd1 smarcd1 coding upstream 7717 24827806 ~ 24858457 (+)
asic1b asic1,LOC104953473,LOC102798299 coding upstream 43861 24623492 ~ 24822313 (+)
gls2b LOC103355460,LOC104964278 coding upstream 283027 24568491 ~ 24583147 (+)
rdh5 rdh5,LOC104964277 coding upstream 298752 24561705 ~ 24567422 (+)
LOC120556805 bcdin3d,LOC102799648 coding downstream 2578 24888607 ~ 24891414 (+)
rab22a rab22a coding downstream 23055 24909084 ~ 24921376 (+)
LOC120557917 vapb,LOC101078863,LOC108231687,LOC103355448 coding downstream 37810 24923839 ~ 24946743 (+)
LOC120558032 NA coding downstream 228889 25114918 ~ 25120366 (+)
capza1a LOC104945687,LOC106582739 coding downstream 437365 25323394 ~ 25329667 (+)
G41375 itch,LOC104964281,LOC107681287,LOC101070007,LOC108231686,LOC103355463 non-coding upstream 324021 24540909 ~ 24542153 (+)
G41368 NA non-coding upstream 342567 24521599 ~ 24523607 (+)
LOC120557758 NA non-coding upstream 412155 24452621 ~ 24454019 (+)
G41360 NA non-coding upstream 414605 24436382 ~ 24451569 (+)
G41354 NA non-coding upstream 444291 24419201 ~ 24421883 (+)
G41441 NA non-coding downstream 35607 24921636 ~ 24921851 (+)
G41518 NA non-coding downstream 136429 25022458 ~ 25022749 (+)
LOC120557911 NA non-coding downstream 166807 25052836 ~ 25065136 (+)
G41539 NA non-coding downstream 199385 25085414 ~ 25085842 (+)
LOC120558031 NA non-coding downstream 213258 25099287 ~ 25113176 (+)
bloc1s1 bloc1s1,LOC102796612 other upstream 305856 24555525 ~ 24560318 (+)
znfx1 NA other upstream 998662 23848047 ~ 23867512 (+)
cbfa2t2 cbfa2t2 other upstream 1094242 23734948 ~ 23771932 (+)
itga7 itga7 other upstream 2873563 21950376 ~ 21992611 (+)
vgll4b vgll4 other upstream 3522463 21295102 ~ 21343711 (+)
slc12a5a LOC103355988 other downstream 322127 25208156 ~ 25310553 (+)
slc16a1a slc16a1,LOC102208676,LOC102781600 other downstream 796378 25682407 ~ 25690935 (+)
LOC120558082 kcna10,LOC104941363 other downstream 881063 25767092 ~ 25872919 (+)
LOC120558088 LOC104941431 other downstream 1018740 25904769 ~ 25907738 (+)
G41825 NA other downstream 1382573 26268602 ~ 26273315 (+)

Expression


Co-expression Network