c4h1orf158


Basic Information

Item Value
gene id c4h1orf158
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 27964559 ~ 27966394 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796541.1
TCCCTGGTTAGGTACGTTTGACACCAGGTAAAGCATGCACCAAACAGGGACTGTGCAGGATAAATGGGCCCAAACCGGCTGGAGGATAGAGCAGAAGTATGCCAACAAAGTGCTGGTAGGCAACTGGGCGGAAGAAAGACTTCAGTTCACTCGGGAGCCACAGACAGCCAACAGCACCAACCGTGTAGACTACCGGCCCCACTGGGACTTCAAGCCAGACGTCTTTGAGAGACGATCTGCCCTGCTGAGAGCTGAGGGGCTTCCATCCAAGCTGCTATTTGCCCACTGTGGCCCGCCATCCTCTAATTACTTGGTCACGCACTCTGAAGAGAGATACCAGTGTAAACATACCAATGCTTTGCCCACTCTGCTGCCCGGGCATCCAGACAGCTTGACATGGCAGCTTGAGAGGTCTGACCGGCCAGTTTCTGCCCTTCCAACCAACTCTGGCCCGCTGCGGTCCACAAAGCACCGTTTGGAAAAGCAGCAGTCACACCTCCCGTCACTGACTGTGTATAGGTCAGCATACCAGAAGCACCCACTTAGTGCCTTCTGCCAGAGCCGCTTTGCCAGGGCTTCACGCATGCTGTCCAGCCACCTCCATGcagccaatcacaacaataaGGACCTGGATCTGAGGCAGCACTCGCTACTACAAATCCCAGATCATTGTTTGAGTCAACCTCCACAATCACAACTGGCAGAGAGACAACAATGTGGTTCTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796541.1 True 727 mRNA 0.54 4 27964559 27966394

Neighbor

gene id symbol gene type direction distance location
aadacl4 NA coding upstream 465 27960725 ~ 27964094 (+)
lrrc38b LOC108231699,LOC101063821 coding upstream 63963 27881093 ~ 27900596 (+)
LOC120556812 NA coding upstream 87948 27875542 ~ 27876611 (+)
nmur3 LOC102295936,LOC100702544,LOC102199352,LOC101463611 coding upstream 346398 27610111 ~ 27618161 (+)
alpl alpl coding upstream 422492 27521855 ~ 27542067 (+)
LOC120558056 NA coding downstream 400516 28366910 ~ 28369124 (+)
rnf207a rnf207 coding downstream 646146 28612540 ~ 28640689 (+)
LOC120557435 NA coding downstream 754517 28720911 ~ 28722206 (+)
LOC120557430 LOC104950703 coding downstream 870856 28837250 ~ 28855733 (+)
pnp4a LOC103367714,LOC101478937,LOC106510859 coding downstream 918182 28884576 ~ 28891360 (+)
G42147 NA non-coding upstream 311111 27653121 ~ 27653448 (+)
G42085 NA non-coding upstream 502800 27460521 ~ 27461759 (+)
G42075 NA non-coding upstream 518278 27442408 ~ 27446281 (+)
G42074 NA non-coding upstream 522220 27440480 ~ 27442339 (+)
G42061 NA non-coding upstream 532175 27419787 ~ 27432384 (+)
G42211 NA non-coding downstream 248354 28214748 ~ 28215179 (+)
G42230 chd5,LOC102784485 non-coding downstream 594400 28560794 ~ 28561264 (+)
G42249 rpl22,LOC104952292 non-coding downstream 643823 28610217 ~ 28611502 (+)
LOC120557449 NA non-coding downstream 864214 28830608 ~ 28836904 (+)
G42345 NA non-coding downstream 914450 28880844 ~ 28881314 (+)
ephb2b LOC104917933,LOC103376520 other upstream 141299 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 1199822 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 1415760 26542507 ~ 26548799 (+)
G41825 NA other upstream 1691244 26268602 ~ 26273315 (+)
LOC120558088 LOC104941431 other upstream 2056821 25904769 ~ 25907738 (+)
G42449 NA other downstream 1274019 29240413 ~ 29242253 (+)
ergic3 ergic3,LOC102788871 other downstream 2143141 30109535 ~ 30135834 (+)
G43045 NA other downstream 4493738 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 4504401 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 5071540 33037934 ~ 33041311 (+)

Expression


Co-expression Network