tex264a (tex264,LOC102797020)


Basic Information

Item Value
gene id tex264a
gene name tex264,LOC102797020
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 16606451 ~ 16681516 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796559.1
ATGTCTGATTTAATTCTGGTGCTCTTGTTAGTCGTGCTCCTGGTGTGTTTGATTGTGACAGTTGGTGGCTTCCTGCTATACTCGGGACTACTGTGTGATGTGATTATAAAGACTGGGCCACCTCCTGTCAAAAGTGTTACCATTGCTTATAAGTTCAGAGAGGGATCATACAAGGACTGCGGTGCAGCCTACACAGAGAGCTGCAGCATTGGGCCACAGCTGAGCACCGTCGGTGTCTTCTACGATGACCCCAAGCAGAGGCCAGCAGAGAAATGTCGATACGTGGTGGGCAGTGTCCTGTGTGAGGGTGAAGAGAAGCCAGATGAAGAACTGCAGAAGATGTATGAGAAGTTTGGCTTCAAGGTGTTTTCTCTACCTGAAGTGAGCCACGCTGTGACCACCAGCTTCCCCTGCTCCACCCCTTTGTCTCACGTGCTGGGACCTTACAGGGTCTACCCCAGGCTCGCTTCCTACATTGAGgAGAGGAAGCTGTGTGCATTCCCAACCATTGAGATCTGTAGCTCAGATGTCATCAACTATATGGTTCCACTGTCTCGCCAGACTGACTTCTTTGTTCCAGAGATGAAGGAGGAGGTTACAACAGATGTTAAAGAAGAGGACTCTGACGAGGACAGAGGAACTGACATTACAGGTGCAGACTCCCACAGTGATGTGAGTTCAGTGAGCGGCGGCGTGCCctgggacagcagagagacatCCCTGGCTGCTTCCACAGCCGCCTCCCTGGCATCTTCCCTGCCTCTGAGGGACGTAATGGATGCAAATGAAGACATTAAGCACAGGGACAACAGCGAGAGGGGCTCAAACGAGTCAATGGGCAGCGGCTCGTCCTTTGAGGAGCTTGACATGGatcaggaggagcaggaggcaggagaagagagggaagagaaaggAGATGGAGAAGAGGCGGAGGTCCCTGAGGGTGAAGACGGAGCAAGAGCAGCAGTTGAACTGGTGGCTGAGAAGAAGGAACCCTTGGGGGAAGGAGAGGAGTAGGGAGGACGCTgaagagaaaagagatgagGCCATGTAACCCCGGCCTGCTAGAGAGTTTCTCAGTTGTCGCTGGTTATCTGTCATGTAATCATGTTGGTGGATCTAAAGCTGTTTATGCCGTGACCAACATGCCGTATCTCAGCGCCTTCTAATTCTCTTTTTGAAGCCTGTACCATGTTATACTGTAATCtcattttttataattactGATCCTATATTTAAACTCTGTCAGGATACAACAGACAGTTCATTTGGTTAAGTCTTCTTGAGTAAACCTAATTTTCTCTGCACATAGTGTGTGGCAAATGAGAGGCAAGATTTGTTCACTATATATTTCATTTCAAACTGTAATCCTGTGTGAATCCCCACCATTCCTTGTGACACTTCAGTTTAAGATTAACATCAGAGGAAGGACATTGACGCCAGCTATCCTGGATCATCATACAGCATCTTTTTTCCCATGTGTAACAGTTGATATTGTACCCCACTTCCCATGTCCTGACAATTTGTCTGTAATGTGTTGGTGTGCATTACCCGACTTTGGTGTCTCGATATCCAGTAACGATGGGGTGAAAATGTGCAGGACCTAATGCCGTAAAAATGTTGACAGACCTACTGTATTTCAgtgtgttgttaaaaaaaaaaaaaaaaaatcctatcaCACAGGGGATAATTCAGAAGTCTGAGGCAGAAAGAACTTTTATCAACACCAGTAACATCACCAAAGCCTACAAGTCACCAGGACTAGGAATTACAGTAAAATGCAATTCAAAGATGCAAACTTTTCCCCTTGGAGACTGTACAGAACATTTTATTGTCACCCTTTTGCTCAGATAACTGCTTTAGATTTTAACGTGATATTCTCTTCTATAGTCGATTTGTTGAACCAGTCTACAGTTCTGTTTGTAGCCAAAATTCACTCTTTTCCAGAGACTAGTTGTGATATGTTCGTAGGTTGAAATTGTTGGTGCTGTGAGACATTGGAAGTAATGTTCAGCACATTGCCGTggttgtgtctttctgtctgtaatAAAATTTTCCAATGAAAAGTTAA

Function

symbol description
tex264 Enables signaling receptor activity. Involved in protein-DNA covalent cross-linking repair. Acts upstream of or within reticulophagy. Located in several cellular components, including autophagosome membrane; endoplasmic reticulum membrane; and replication fork.

NR:

description
PREDICTED: testis-expressed sequence 264 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796559.1 True 2071 mRNA 0.46 4 16606451 16681516

Neighbor

gene id symbol gene type direction distance location
fancd2 fancd2 coding upstream 1036 16584412 ~ 16605415 (+)
usp4 usp4,LOC102796025 coding upstream 28236 16566701 ~ 16578215 (+)
emc3 emc3,LOC101173295,LOC101079695 coding upstream 40056 16562865 ~ 16566395 (+)
arpc4 arpc4,LOC103358720,LOC100696600,LOC103385929,LOC107721188 coding upstream 439313 16161960 ~ 16167138 (+)
mustn1a mustn1 coding upstream 565238 16039813 ~ 16041213 (+)
grm2a LOC103368479 coding downstream 2292 16683808 ~ 16716227 (+)
parp3 parp3 coding downstream 36764 16718280 ~ 16722817 (+)
gpr61l LOC104930496,LOC103368477,LOC104957521,LOC100694581 coding downstream 42643 16724159 ~ 16730016 (+)
LOC120557897 LOC104966248,LOC103368476,LOC102798401,LOC101469442,LOC105924440,LOC106583184 coding downstream 51870 16733386 ~ 16735306 (+)
cav3 cav3,LOC107093348 coding downstream 56520 16738036 ~ 16741512 (+)
G39143 NA non-coding upstream 26729 16579085 ~ 16579722 (+)
G39134 NA non-coding upstream 50246 16552684 ~ 16556205 (+)
G39113 NA non-coding upstream 96266 16503438 ~ 16510185 (+)
G39076 LOC104930492,LOC103358728,LOC102300171,LOC101465142 non-coding upstream 354726 16235014 ~ 16251725 (+)
G39052 LOC101067125,LOC103386161,LOC103365890 non-coding upstream 410667 16195379 ~ 16195784 (+)
G39195 NA non-coding downstream 100895 16782411 ~ 16782618 (+)
G39196 NA non-coding downstream 103232 16784748 ~ 16785065 (+)
G39197 NA non-coding downstream 104315 16785831 ~ 16786051 (+)
G39210 NA non-coding downstream 137230 16818746 ~ 16823256 (+)
G39302 LOC102778475,LOC101478284,LOC100692415 non-coding downstream 366419 17047935 ~ 17048365 (+)
G39116 NA other upstream 62871 16517536 ~ 16543580 (+)
G39104 LOC103385912,LOC104930488,LOC103358732,LOC101079922 other upstream 171222 16433238 ~ 16435229 (+)
LOC120557902 rab7,rab7a,LOC102230535,LOC106583206,LOC105017191,LOC101061812 other upstream 448089 16149125 ~ 16158362 (+)
eefsec eefsec,LOC102787825 other upstream 546121 16049678 ~ 16060330 (+)
ccdc174 ccdc174 other upstream 632214 15965402 ~ 15974237 (+)
LOC120556687 LOC103362900,LOC104950925,LOC102306361,LOC100693144,LOC103362894 other downstream 283101 16964617 ~ 17046696 (+)
G39351 NA other downstream 430597 17112113 ~ 17119890 (+)
srsf3b srsf3,LOC104948713,LOC103465186,LOC102226051,LOC103150674 other downstream 511635 17193151 ~ 17198217 (+)
LOC120557637 minos1,LOC103357934 other downstream 689967 17371483 ~ 17377560 (+)
G39581 LOC104949003,LOC103357913 other downstream 926414 17607930 ~ 17609216 (+)

Expression


Co-expression Network