ppp1r3db (LOC104967763)


Basic Information

Item Value
gene id ppp1r3db
gene name LOC104967763
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 4793581 ~ 4797260 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796711.1
TATATATTTACATAACCCTTGTTTTCATAGTCTAACCCTACATTTCAAAATCTATAATGATATGCATGGATTGACAACCTGAACTATGCTCAATGTGCTAACTAATTGTGCAACCCTTTTTCTGCACTAGTCagctcttcacacacacacacagtagatctatctatctttttatttattttgttgcaGGACAAGAATGGACCAGAATCCGATTGCAGTGAAAACCCATTGAGATGTTGTGTTTAGTGTGCTGTGGAGTGTTACTGGTATTCGCTGGCAGAGGCAGGCTGTCTGTCATCTGGTGGCAGTTGGGTTCGTAGCAACTGTGCTTCCTGACAGTGAACAAGGTCAGTGCAAGAGGCAGCGGCTCCACAACAGAACACGAGAAGTCTCTGCTGGAAAGGTGTGTTTGATGTGACAAACATGGCCGGTTCTGGTGAAAAGAGTGGGACCCAGCCTCAGTTCATCAGTGGTTCCAGTAATGTGTGCACCACTAGAAACACCACCATTCGTCTTCGGGACATTTATGATCCCAAACCTCAACCTCCCAAAGCCCCAGTCCGGATACGCCCTCCAGGTCCAAGAGCTCCCTCAGTAAAGGAACTCAATTTAAAGCACAGCTTTCCCAGTGATCCTCAAACCAAGACAATCATGAGGAAGCGAGCTCAGTCTCTCCCTTCGTCTGCAGACAGGAAAAGGGAACTTCGGAGTCTGCAGGTACGCTTTGTGGACTCATTGGGCCTCGAGTTAGAGGATGTTAAGGTCTTCAAAGCTCAAGAGCACCCCATGATACCTCAGCATGTTATGTTCAGACTACTGATGAGCTCTGAGCTGGCTTTCGGGAGGTCTTTGGAGCTGTCCCTGCCTTACTTCAAACCTTGCTTCCCTGAAAATATGGGGGCTCAAACAGACTTCATGAAGCGTCTCTGCGCTCAGAGCGTGTGTCTGGAGCAGGTCCTGTGTTCAGAGCAGGGGATAACAGGCACTACACAAGTACTCAATTTAGCTTATGAGAAAGAAGTCACAGTGCACTACTCTTTCACCAACTGGAAAACACACACGGAAACAACAGCATCCTGGGTGTCCACTGGGAACCGTGGGGAGTGTGACGCTCCAGAAACAGATATCTTCAGATTTCGTCTACCTGTCCCACCCTTCATTCTGCAGCCAGGAGCCATTTTAGAATTTGCCATCTGCTACCATGTAAAAGGATGTGATTATTGGGACAACTACAATGGACGTAATTACAAACTGTCATGTCACAGTTATAAGGTGACAGTGCCCAGGGAGTGCGAGGACAGCATGCTGCATTTTACCTGAGTGTCCACACGAGCGAGCTGTAACCCCTGCATGCACATATGGGTGACAAGAAAGcaaaattaattttactttaaaggggtgatagaatgattatatagggtatttcacactgttccttaaggtc

Function

NR:

description
PREDICTED: protein phosphatase 1 regulatory subunit 3D-like

GO: NA

KEGG:

id description
K07189 PPP1R3; protein phosphatase 1 regulatory subunit 3A/B/C/D/E

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796711.1 True 1444 mRNA 0.46 3 4793581 4797260

Neighbor

gene id symbol gene type direction distance location
LOC120557706 LOC104933218,LOC100705047,LOC101475466 coding upstream 25889 4745444 ~ 4767692 (+)
txnrd3 LOC103366329,LOC102309132,LOC105934676 coding upstream 63954 4708681 ~ 4729627 (+)
LOC120558218 NA coding upstream 109237 4681878 ~ 4684344 (+)
LOC120557508 NA coding upstream 208224 4584329 ~ 4585357 (+)
LOC120557502 LOC105888650,LOC101068541,LOC107388332,LOC103395674,LOC105896821 coding upstream 222046 4569910 ~ 4571535 (+)
acot8 acot8,LOC102785802 coding downstream 72454 4869714 ~ 4875274 (+)
ift52 ift52,LOC102785231 coding downstream 78123 4875383 ~ 4879610 (+)
mybl2b mybl2 coding downstream 83946 4881206 ~ 4892779 (+)
rpn2 rpn2,LOC102784465 coding downstream 96189 4893449 ~ 4903690 (+)
LOC120556975 LOC103365933,LOC100695288,LOC105934533 coding downstream 159091 4956351 ~ 5043477 (+)
G35958 NA non-coding upstream 99016 4691055 ~ 4694565 (+)
G35942 NA non-coding upstream 176184 4615893 ~ 4617397 (+)
G35941 NA non-coding upstream 180577 4610538 ~ 4613004 (+)
G35925 LOC104957620,LOC100698470,LOC102194894,LOC101473847,LOC102310675,LOC102787480 non-coding upstream 183521 4605460 ~ 4610060 (+)
G35834 NA non-coding upstream 423360 4369919 ~ 4370221 (+)
G36022 NA non-coding downstream 2711 4799971 ~ 4800984 (+)
G36025 LOC107550338,LOC103365918,LOC104947949,LOC106955159 non-coding downstream 7785 4805045 ~ 4809978 (+)
G36026 NA non-coding downstream 10431 4807691 ~ 4848220 (+)
G36034 NA non-coding downstream 52494 4849754 ~ 4850038 (+)
G36035 NA non-coding downstream 53994 4851254 ~ 4880394 (+)
G35921 NA other upstream 208106 4487535 ~ 4585475 (+)
LOC120557928 NA other upstream 260719 4529833 ~ 4532862 (+)
G35791 LOC101072424,LOC104921976 other upstream 843453 3948834 ~ 3950128 (+)
epha8 epha8,LOC102791453 other upstream 1203969 3453600 ~ 3589612 (+)
G35618 NA other upstream 1434761 3244231 ~ 3358820 (+)
cdk5rap1 cdk5rap1 other downstream 114439 4911699 ~ 4934164 (+)
G36156 LOC103374102 other downstream 1123664 5920924 ~ 5924400 (+)
rybpb rybp other downstream 1237812 6035072 ~ 6055216 (+)
prok2 prok2,LOC103355444 other downstream 1307353 6104613 ~ 6107152 (+)
foxp1b foxp1 other downstream 1342203 6139463 ~ 6306143 (+)

Expression


Co-expression Network