Gene
RNA
| Item | Value |
|---|---|
| gene id | cast |
| gene name | NA |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053115.1 |
| NCBI id | CM020912.1 |
| chromosome length | 44863486 |
| location | 10294535 ~ 10333383 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039796744.1 | False | 3234 | mRNA | 0.52 | 35 | 10294535 | 10325820 |
| XM_039796745.1 | False | 3239 | mRNA | 0.52 | 35 | 10294535 | 10325820 |
| XM_039796747.1 | False | 3193 | mRNA | 0.52 | 34 | 10294535 | 10325970 |
| XM_039796748.1 | False | 3204 | mRNA | 0.52 | 34 | 10294535 | 10325820 |
| XM_039796749.1 | False | 3209 | mRNA | 0.52 | 34 | 10294535 | 10325820 |
| XM_039796750.1 | False | 3184 | mRNA | 0.51 | 34 | 10294535 | 10333383 |
| XM_039796751.1 | False | 3142 | mRNA | 0.52 | 33 | 10294535 | 10325970 |
| XM_039796752.1 | False | 3063 | mRNA | 0.52 | 33 | 10294535 | 10315226 |
| XM_039796753.1 | False | 3045 | mRNA | 0.52 | 34 | 10294535 | 10318555 |
| XM_039796754.1 | False | 3132 | mRNA | 0.51 | 33 | 10294535 | 10333382 |
| XM_039796755.1 | False | 3177 | mRNA | 0.51 | 34 | 10294535 | 10318513 |
| XM_039796756.1 | False | 3123 | mRNA | 0.52 | 34 | 10294535 | 10325820 |
| XM_039796757.1 | True | 3267 | mRNA | 0.51 | 33 | 10294535 | 10332606 |
| XM_039796758.1 | False | 3096 | mRNA | 0.52 | 34 | 10294535 | 10325820 |
| XM_039796759.1 | False | 2994 | mRNA | 0.52 | 33 | 10294535 | 10318555 |
| XM_039796760.1 | False | 3125 | mRNA | 0.51 | 33 | 10294535 | 10318512 |
| XM_039796761.1 | False | 3063 | mRNA | 0.52 | 33 | 10294535 | 10325820 |
| XM_039796763.1 | False | 2990 | mRNA | 0.52 | 33 | 10294535 | 10325819 |
| XM_039796764.1 | False | 2922 | mRNA | 0.52 | 32 | 10294535 | 10325969 |
| XM_039796765.1 | False | 2925 | mRNA | 0.53 | 32 | 10294535 | 10325820 |
| XM_039796766.1 | False | 2912 | mRNA | 0.51 | 32 | 10294535 | 10333381 |
| XM_039796767.1 | False | 2871 | mRNA | 0.52 | 31 | 10294535 | 10325969 |
| XM_039796768.1 | False | 2793 | mRNA | 0.52 | 31 | 10294535 | 10315226 |
| XM_039796769.1 | False | 2906 | mRNA | 0.51 | 32 | 10294535 | 10318512 |
| XM_039796770.1 | False | 2860 | mRNA | 0.51 | 31 | 10294535 | 10333380 |
| XM_039796771.1 | False | 2852 | mRNA | 0.52 | 32 | 10294535 | 10325819 |
| XM_039796772.1 | False | 2993 | mRNA | 0.51 | 31 | 10294535 | 10332602 |
| XM_039796773.1 | False | 2724 | mRNA | 0.52 | 31 | 10294535 | 10318555 |
| XM_039796774.1 | False | 2817 | mRNA | 0.53 | 31 | 10294535 | 10325820 |
| XM_039796775.1 | False | 2853 | mRNA | 0.51 | 31 | 10294535 | 10318510 |
| XM_039796776.1 | False | 2751 | mRNA | 0.52 | 30 | 10294535 | 10325969 |
| XM_039796777.1 | False | 2699 | mRNA | 0.52 | 29 | 10294535 | 10325968 |
| XM_039796779.1 | False | 2688 | mRNA | 0.51 | 29 | 10294535 | 10333379 |
| XM_039796780.1 | False | 2688 | mRNA | 0.52 | 30 | 10294535 | 10325820 |
| XM_039796781.1 | False | 2688 | mRNA | 0.53 | 30 | 10294535 | 10325820 |
| XM_039796782.1 | False | 2681 | mRNA | 0.52 | 30 | 10294535 | 10325819 |
| XM_039796783.1 | False | 2682 | mRNA | 0.51 | 29 | 10294535 | 10318510 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| wdr1 | wdr1,LOC102791765 | coding | downstream | 78403 | 10204986 ~ 10216132 (-) |
| slc2a9l2 | slc2a9 | coding | downstream | 92784 | 10101729 ~ 10201751 (-) |
| zbtb49 | zbtb49 | coding | downstream | 280816 | 10007330 ~ 10013719 (-) |
| LOC120558214 | synpr,LOC104965753 | coding | downstream | 298780 | 9967082 ~ 9995755 (-) |
| LOC120558233 | NA | coding | downstream | 331992 | 9957831 ~ 9962543 (-) |
| rfesd | rfesd | coding | upstream | 88461 | 10421844 ~ 10424787 (-) |
| ube2r2 | ube2r2 | coding | upstream | 100817 | 10434200 ~ 10442069 (-) |
| nop56 | nop56 | coding | upstream | 157933 | 10491316 ~ 10497248 (-) |
| LOC120558246 | NA | coding | upstream | 158907 | 10492290 ~ 10492357 (-) |
| LOC120558250 | NA | coding | upstream | 160820 | 10494203 ~ 10494322 (-) |
| G37258 | NA | non-coding | downstream | 24124 | 10257259 ~ 10270411 (-) |
| G37260 | ptpra | non-coding | downstream | 41982 | 10252158 ~ 10252553 (-) |
| G37165 | NA | non-coding | downstream | 234128 | 10059804 ~ 10060407 (-) |
| G37159 | NA | non-coding | downstream | 250100 | 10044168 ~ 10044435 (-) |
| G37158 | NA | non-coding | downstream | 250713 | 10042247 ~ 10043822 (-) |
| G37305 | dcaf12,LOC102784774 | non-coding | upstream | 120578 | 10453961 ~ 10456420 (-) |
| G37321 | NA | non-coding | upstream | 155417 | 10488800 ~ 10490052 (-) |
| G37361 | NA | non-coding | upstream | 218910 | 10552293 ~ 10553381 (-) |
| G37364 | NA | non-coding | upstream | 327403 | 10660786 ~ 10661268 (-) |
| G37418 | NA | non-coding | upstream | 633174 | 10966557 ~ 10974888 (-) |
| LOC120556768 | LOC104965754,LOC103359409,LOC102210396,LOC101479743,LOC102082439,LOC102300053 | other | downstream | 288362 | 9998996 ~ 10006173 (-) |
| G37045 | lrig1 | other | downstream | 898965 | 9394739 ~ 9395570 (-) |
| LOC120558079 | fam19a1,LOC101482978,LOC107385433,LOC108244096,LOC103386186,LOC106518519,LOC101163164,LOC102209545 | other | downstream | 1260868 | 8906439 ~ 9033667 (-) |
| mustn1b | mustn1,LOC107385427 | other | downstream | 1671713 | 8619087 ~ 8622822 (-) |
| LOC120557774 | ucn2,LOC104952568,LOC108241195,LOC106518500,LOC100704776 | other | downstream | 1879602 | 8412726 ~ 8414933 (-) |
| rhobtb3 | glrx,rhobtb3,LOC102786935 | other | upstream | 54534 | 10387917 ~ 10419906 (-) |
| tpgs2 | tpgs2 | other | upstream | 199143 | 10532526 ~ 10536353 (-) |
| fam219aa | fam219a,LOC101484940,LOC100701621 | other | upstream | 598852 | 10932235 ~ 10943639 (-) |
| LOC120557925 | tmem233 | other | upstream | 649687 | 10983070 ~ 10988818 (-) |
| G37432 | LOC106915059,LOC106958204,LOC102221633,LOC103464975,LOC100700174,LOC101482873,LOC102210230 | other | upstream | 717916 | 11051299 ~ 11053085 (-) |
