LOC120556919


Basic Information

Item Value
gene id LOC120556919
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 35517738 ~ 35519948 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796794.1
CATGGATCAAGTTAAGCTGGCCTGTACAAGTTTAGAGGAGTGTGGAGCCCAGGAGACTCAAATGGACGCCCTCCCAGACCTCCGCAACCAAATCCTACAGCTGCTCTGCACCAGACTAAATGATGACTGCATCATGGCGATGCAGGAAGTGCTGCAGCTCATGCAGAGGAGCTCGTACTACTTGGAAATCCAACATGATGATTTGCTACCAACAGCAGATGAGCAGCAGCACActttacatttgtctgacagcacGGTGTGGTCTCTCGTTGACCAGCGGAGGCTGCAGCGTGCAATGACCCTGGCTAACACCCAGGTGAAACTCCACCTCACTTTTCTGGGACTGCTCTACGAAGAGATCATCAGGGGCTGTCAGGAGCTTGAGGCCTTTGTCATGAAGTACGACCAGGGTTTGGTAGACAGTGACATTGCAGCTTCCACCCAGGAGAGGCTCCAGCAAACCCACCAGTACCTGAAAGACTTTGAGAGCAGATTGGCTCGGAAACTCGGCCCGCTGGACCTGCAGAACCAGCTCATCCCCAACACAGGCAGCATCCCCATACAACAGCTCAGTGCATCACTGGCCATCAAGATGCCGGTTATATTTAACCGGTCCGAGACTTGCACGACATCCAACACTGTACATCTGTGTTGGGAAGTCACAGGTGAGCAGTCTCAGGAGTTGAACCAAGAGTTTGAGATCCACGTAAAGAGTTTTCACCCAACAATTGCTGAACATTGCCAGTTTACTAAATCTACATGCCAGTCGTACAACATAGAGGTCAATAACCTAATACCTGACAGGTATTATAAGTTCTCTGTCAAGAGAGTAGATTCTGTAAACCTGGTGTATGGACTGTGGGTTGACACCATCACCCTGAAGACCTTGGATATTTCCAAGTCACAGCAAGCTGCCTCTTATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796794.1 True 925 mRNA 0.50 2 35517738 35519948

Neighbor

gene id symbol gene type direction distance location
tp53rk tp53rk coding upstream 44412 35470994 ~ 35473326 (+)
LOC120557477 LOC103375199,LOC104930306,LOC101473264,LOC108251201 coding upstream 65419 35426361 ~ 35452319 (+)
LOC120558245 NA coding upstream 77599 35439977 ~ 35440139 (+)
LOC120556789 LOC104930304,LOC100703713,LOC103370810,LOC102215223 coding upstream 198569 35316477 ~ 35319169 (+)
LOC120556883 LOC104930311,LOC103370811,LOC104960357,LOC100711115,LOC101474327 coding upstream 239304 35275097 ~ 35278434 (+)
sypl2a LOC103367888 coding downstream 662644 36182592 ~ 36210487 (+)
atxn7l2a atxn7l2,LOC103374593 coding downstream 696137 36216085 ~ 36242866 (+)
LOC120557073 LOC103374592,LOC100706250,LOC102300861,LOC101476702,LOC102207203,LOC102780650 coding downstream 723709 36243657 ~ 36249486 (+)
camk1ga LOC108240302,LOC103373651 coding downstream 781998 36301946 ~ 36327932 (+)
LOC120556721 NA coding downstream 846572 36366520 ~ 36368410 (+)
G43859 NA non-coding upstream 58722 35458707 ~ 35459016 (+)
LOC120556905 NA non-coding upstream 179162 35338003 ~ 35338576 (+)
G43811 NA non-coding upstream 291090 35226402 ~ 35226648 (+)
LOC120557494 NA non-coding upstream 512970 35003472 ~ 35004768 (+)
G43737 NA non-coding upstream 519001 34996613 ~ 34998737 (+)
G43874 NA non-coding downstream 9885 35529833 ~ 35530044 (+)
G43877 NA non-coding downstream 20527 35540475 ~ 35541252 (+)
LOC120556868 NA non-coding downstream 37703 35557651 ~ 35560888 (+)
G43893 NA non-coding downstream 65253 35585201 ~ 35585406 (+)
G43896 helz2 non-coding downstream 71089 35591037 ~ 35593586 (+)
LOC120556915 NA other upstream 31503 35463772 ~ 35486235 (+)
G43656 NA other upstream 850556 34665236 ~ 34667182 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other upstream 2171932 33340284 ~ 33345806 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other upstream 2180971 33262195 ~ 33336767 (+)
G43277 NA other upstream 2305420 33187738 ~ 33212318 (+)
G43924 NA other downstream 144195 35664143 ~ 35666041 (+)
trnac-gca_18 NA other downstream 442591 35962539 ~ 35962610 (+)
fezf2 fezf2 other downstream 1183307 36703255 ~ 36711295 (+)
plekha6 plekha6 other downstream 2440758 37960706 ~ 38096072 (+)
LOC120557027 NA other downstream 2646234 38166182 ~ 38174494 (+)

Expression


Co-expression Network