LOC120557029


Basic Information

Item Value
gene id LOC120557029
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 38306826 ~ 38308984 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797044.1
TAACAGGGACCAGATCATATTACAAAAAGATTTTGATGCAAACTATAGCTGGTTGCAGTGATATCACGTAGTCAGGTTTGTGGACAGCAGAATTTGGAAATATGAACCTGTGTTTGGAGGCCCATCATGTCAAATCCATCATGTTAAGGATTAATGCCAGCCGAGAAACCTGTGTCAGGTAACCGCTTATAGCGTCACACCCAGCACCCAGTGTGTTTACCACCACTGAAAACTTCCCCaatttaaactaaataaaacacaataatgcAGTTATTTCACTTTCGTTATATCATAAAATGTCTCTGCTTACTTGAACACCACTGTCACATTTAACACACATTACTTTTAGATATTTTTAAAGACAAAACGTGAGGAAAACTCGCTGCGAGTAGTCCGAAATGACTGTGTATCCGAAAGGTTTGAAGCCTCCTGGAATCAAATTAACGAGTCCTCGTCGCCAAACATGAGCTCAGTTTGAAGGGGAGAAGGGTTTCTCACCACTAAAATaacaattttgttttaaaacgtTTATCTTCTATGAATTTTATCCTCAAATTGtggaagagaaaacacaaagtgtcgccacattttcagcaggtcagcggagcggctgtggattgactctccacggttctcatgaGCTTTATAAGTCCCGCCTCCTCTCCGAGCAGGAACAGCAGACTGTAACgcgacagagaaagacacagacatGGCAGAAGAAGcaccagcagctccagcagttCCCGCGGCGAAAGCCCCGGCCAAAGCTCCCAAGAAGAAGGCAGCTCCCCGGGCAAAGAGTGACGGACCCTCCCTTCCGAAGCTCATCCTCGACGCCGTGACAGAATCCAAGGACCGTAAAGGCACCTCGCTTCCAGCTATCAAGAAGACGTTAGCCACCAAAGGCATCGACCTGGAGAAGTCCAACAAACGCATCAACACCGCGGTGAAGAAGCTGGTGACCGACGGAAAGCTGGTCCAGAATAAAGGGATTGGGGCTTCCGGATCCTTCAAGCTCCCCAAGGCTGCGCCTAAAGCTGCCAAATCAGGCAAGAAAGCTCCCGTTAAGGTGAAGAAACCCGCTGCCAAGTCCCCGCAGAAGAAAACCGCCGCCAAGAAAACCGCAGTGAAGAAGACCGCAGCCAAGAAAACCGCCGTTAAGAAACCAGCAGCCAAGAAACCAGCGGCCAAGAAGTCTCCTGTGAAGAAAGCTGCTAAGAAGCCAGCAGTGAAATCTACTCCCAAGAAGGCTGCCCCTAAAAAGGTcgcaaagaagaagactcctgtgaAGAAAGCTCCGGCAAAGAAAGCTGCAGCGAAGAAGTCCAAGAAGTAAAGTGGCTCTTTAACCTGCACTCAGTGCACCAAAaggctcttttaagagccaccACACATTCACAAGAGAGCTGTTTTCCTACCACATTCCCATGTCTGtttccattgtttttttccatCATTTGTTATATCGAAGCACTTTGATCGATATGGAATGTGCTGGTGAAGAGTAATTTAATGTTTACTGTTAGTGTGCCACATttaaaaggggaaaaaacaagTGAGTAACGTTACCTCCTCTTACATTTCATGAATCTACCTCTAAATCTCGTTTAGCTGGAAGGATAGGCCCTTAAGATGGAGCATTACATTTTCAATGGGGGTcctataaatacaaaataattaaaCCTACAAATCGAACAGTGTTACAAGTTAAAACCGCTTGCTCATAAACTACCCAGCTGTTTCAAAAGAATTAGACACAGCAACACAAATAATTAATCAATGAATCACCAAAAGAGCAATTGCAGCCGTTAGTCTTCAGCACAAACTATACATTAAAAGCATGGGGTTGTTTTAAGATGAGAAAATAAAGATGTCCAGAAGCAGTGGTCTTAAGTAGATCTCAGAGAAAAGGAAAGATCATTCCAATAGGAAAGAGCTTATTTGAATGATCTGCATCCAACTTCTTTGAAAATTGGAGGGACAAAGAAACATGGATGTTGCAGATATGAAGATCTACATGGaaaccaaaaaagaaagaacaattgaaaatgaaataaatgaagaTGAACTGAATAGGTGAAGTTGACTCAGGCTGTGGCCAGTTAATTTATTCAAACAAAAGACAATATAATAAACCTTTAAGTCCATCTATATCTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797044.1 True 2159 mRNA 0.43 1 38306826 38308984

Neighbor

gene id symbol gene type direction distance location
LOC120557049 LOC104935308,LOC104932967 coding upstream 2465 38303664 ~ 38304361 (+)
LOC120557052 NA coding upstream 4052 38301095 ~ 38302774 (+)
LOC120557034 NA coding upstream 21214 38282988 ~ 38285612 (+)
LOC120557050 LOC104935308,LOC104932967 coding upstream 47670 38258538 ~ 38259156 (+)
LOC120557043 LOC106528837 coding upstream 49351 38257053 ~ 38257475 (+)
LOC120557035 LOC103395674,LOC101167724,LOC101068541,LOC105888650,LOC101170117 coding downstream 2870 38311854 ~ 38312487 (+)
LOC120557038 si:ch1073-153i20.5,LOC103462478,LOC107386469,LOC103381127,LOC103395676,LOC102204254,LOC101485372 coding downstream 16559 38325543 ~ 38325990 (+)
LOC120557028 NA coding downstream 33459 38342443 ~ 38344251 (+)
LOC120557037 LOC105888650,LOC105896821,LOC103395674,LOC101068541,LOC105891059 coding downstream 37823 38346807 ~ 38347243 (+)
LOC120557646 LOC103371188,LOC100695319,LOC106525027,LOC101482544 coding downstream 57075 38366059 ~ 38409274 (+)
LOC120557055 NA non-coding upstream 58506 38247303 ~ 38248320 (+)
LOC120557056 samd3,LOC101476819 non-coding upstream 78476 38227579 ~ 38228350 (+)
G44325 LOC104935308,LOC104932967 non-coding upstream 146132 38159937 ~ 38160694 (+)
G44265 NA non-coding upstream 357049 37949515 ~ 37949777 (+)
LOC120556894 NA non-coding upstream 474207 37764777 ~ 37832619 (+)
G44387 LOC104935308,LOC107719244,LOC104932967 non-coding downstream 22396 38331380 ~ 38332050 (+)
G44402 NA non-coding downstream 101018 38410002 ~ 38412477 (+)
G44401 NA non-coding downstream 103843 38412827 ~ 38413939 (+)
G44417 NA non-coding downstream 146938 38455922 ~ 38456336 (+)
G44419 NA non-coding downstream 147697 38456681 ~ 38457162 (+)
LOC120557027 NA other upstream 132332 38166182 ~ 38174494 (+)
plekha6 plekha6 other upstream 210754 37960706 ~ 38096072 (+)
fezf2 fezf2 other upstream 1595531 36703255 ~ 36711295 (+)
trnac-gca_18 NA other upstream 2344216 35962539 ~ 35962610 (+)
G43924 NA other upstream 2640785 35664143 ~ 35666041 (+)
G44436 NA other downstream 303653 38612637 ~ 38612971 (+)
LOC120557667 LOC102775714,LOC103375741 other downstream 591588 38900572 ~ 38903056 (+)
LOC120557670 NA other downstream 644134 38953118 ~ 38981733 (+)
LOC120557680 NA other downstream 1438189 39747173 ~ 39774250 (+)
G44581 NA other downstream 1504976 39813960 ~ 39821908 (+)

Expression


Co-expression Network