LOC120557050 (LOC104935308,LOC104932967)


Basic Information

Item Value
gene id LOC120557050
gene name LOC104935308,LOC104932967
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 38258538 ~ 38259156 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797066.1
ACTAATTATGCCTGAGCCCAGCGTCAAAGCGCCCAAGAAGGGCTCCAAGAAAGCCGTCTCTAAGGCCGTCAGCAAGACCggcaagaagaagagaaagaccAGGAAGGAGAGCTACGCCATCTACGTCTACAAGGTGCTGAAACAGGTCCACCCCGACACCGGTATCTCCTCCAAGGCCATGGGCATCATGAACTCTTTTGTGAGCGACATCTTTGAGCGCATCGCCGGTGAGGCCTCCCGTCTCGCCCACTACAACAAGCGCTCCACCATCACTTCCAGGGAGATCCAGACCGCCGTGAGGCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCTGAGGGCACCAAGGCCGTCACCAAGTACACCAGCTCCAAGTAAACCATCCCGCTGCTGTAATCCACTAAACCAacggctcttttaagagccacgCACTTCATCTAAAGAGGTCTTCCCGTTATCATCGAAACCCTTATTAACGTTTAACACTGTATAAACTAATTTGAAGAATTTTCAGGCTTACAGAAACATTGAACTGCAAAGTAAATGGGAACAGCATAAGGTCCTATACAGTGAAGTGAACACAAGCTCTATATGAGAATAAGATTATCATCACAA

Function

NR:

description
PREDICTED: histone H2B 1/2

GO: NA

KEGG:

id description
K11252 H2B; histone H2B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797066.1 True 619 mRNA 0.51 1 38258538 38259156

Neighbor

gene id symbol gene type direction distance location
LOC120557043 LOC106528837 coding upstream 1063 38257053 ~ 38257475 (+)
LOC120557036 LOC101068541,LOC105888650,LOC105896821,LOC105891059,LOC105893409 coding upstream 17396 38240682 ~ 38241142 (+)
LOC120557030 NA coding upstream 19381 38237678 ~ 38239157 (+)
LOC120557047 LOC104932967,LOC104935308 coding upstream 22308 38235563 ~ 38236230 (+)
LOC120557039 si:dkey-261m9.15,LOC103462478,LOC102204254,LOC107386469,LOC103379246,LOC101485372,LOC103381127,LOC103395676 coding upstream 108157 38149971 ~ 38150381 (+)
LOC120557034 NA coding downstream 23832 38282988 ~ 38285612 (+)
LOC120557052 NA coding downstream 41939 38301095 ~ 38302774 (+)
LOC120557049 LOC104935308,LOC104932967 coding downstream 44508 38303664 ~ 38304361 (+)
LOC120557029 NA coding downstream 47670 38306826 ~ 38308984 (+)
LOC120557035 LOC103395674,LOC101167724,LOC101068541,LOC105888650,LOC101170117 coding downstream 52698 38311854 ~ 38312487 (+)
LOC120557055 NA non-coding upstream 10218 38247303 ~ 38248320 (+)
LOC120557056 samd3,LOC101476819 non-coding upstream 30188 38227579 ~ 38228350 (+)
G44325 LOC104935308,LOC104932967 non-coding upstream 97844 38159937 ~ 38160694 (+)
G44265 NA non-coding upstream 308761 37949515 ~ 37949777 (+)
LOC120556894 NA non-coding upstream 425919 37764777 ~ 37832619 (+)
G44387 LOC104935308,LOC107719244,LOC104932967 non-coding downstream 72224 38331380 ~ 38332050 (+)
G44402 NA non-coding downstream 150846 38410002 ~ 38412477 (+)
G44401 NA non-coding downstream 153671 38412827 ~ 38413939 (+)
G44417 NA non-coding downstream 196766 38455922 ~ 38456336 (+)
G44419 NA non-coding downstream 197525 38456681 ~ 38457162 (+)
LOC120557027 NA other upstream 84044 38166182 ~ 38174494 (+)
plekha6 plekha6 other upstream 162466 37960706 ~ 38096072 (+)
fezf2 fezf2 other upstream 1547243 36703255 ~ 36711295 (+)
trnac-gca_18 NA other upstream 2295928 35962539 ~ 35962610 (+)
G43924 NA other upstream 2592497 35664143 ~ 35666041 (+)
G44436 NA other downstream 353481 38612637 ~ 38612971 (+)
LOC120557667 LOC102775714,LOC103375741 other downstream 641416 38900572 ~ 38903056 (+)
LOC120557670 NA other downstream 693962 38953118 ~ 38981733 (+)
LOC120557680 NA other downstream 1488017 39747173 ~ 39774250 (+)
G44581 NA other downstream 1554804 39813960 ~ 39821908 (+)

Expression


Co-expression Network