LOC120557052


Basic Information

Item Value
gene id LOC120557052
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 38301095 ~ 38302774 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797069.1
CAGAATCTTGATTAGAAAATGGCAGAAGTAGCTCCAGCCGCCTCGCCGGCCAAAGCAGCCAAGAAGAAGGTTTCCAAGCCGAAGAAGGCCGGCCCCAGCGTCAGCGAGCTCATCGTTCAGACTGTGGCCGCTTCCAAGGAGCGGAGCGGCGTGTCTGCGGCCGCCCTCAAGAAGGCTCTGGCTGCCGGAGGCTACGATGTGGACAAGAACAAGGCCCGTGTTAAGACCGCAATCAAGAGCCTGGTGGCGAAGGGGACTCTGGTCCAGACCAAAGGGGCCGGAGCCTCCGGATCCTTCAAGATGAACAAGAAGGCTGTTGACACCAAGGCTAAGAAGCCGGTCAAGAAAGTCGCTCCTAAAGCCAAGAAGCCCGCAGCGACAGCTAAGAAGCCAGCAGCCGCGAAGAAGTCCCTGAAGAAGGCCAAGAAAGCCGCTGCAGTCAAGAAAGCAGCCAAGAGCTCCAATAAGGCCACAAAGAGCCCCAAGAAAGTGATCAAAAAGGCCCCAGCAGCAAAGAAAGCCCCCGCTAAGAAGGTTGGCAAGCCCAAAGTGAAGAAGGCAGCACCCAAGAAGAAGTGA

Function

GO: NA

KEGG:

id description
K11275 H1_5; histone H1/5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797069.1 True 579 mRNA 0.57 2 38301095 38302774

Neighbor

gene id symbol gene type direction distance location
LOC120557034 NA coding upstream 15483 38282988 ~ 38285612 (+)
LOC120557050 LOC104935308,LOC104932967 coding upstream 41939 38258538 ~ 38259156 (+)
LOC120557043 LOC106528837 coding upstream 43620 38257053 ~ 38257475 (+)
LOC120557036 LOC101068541,LOC105888650,LOC105896821,LOC105891059,LOC105893409 coding upstream 59953 38240682 ~ 38241142 (+)
LOC120557030 NA coding upstream 61938 38237678 ~ 38239157 (+)
LOC120557049 LOC104935308,LOC104932967 coding downstream 890 38303664 ~ 38304361 (+)
LOC120557029 NA coding downstream 4052 38306826 ~ 38308984 (+)
LOC120557035 LOC103395674,LOC101167724,LOC101068541,LOC105888650,LOC101170117 coding downstream 9080 38311854 ~ 38312487 (+)
LOC120557038 si:ch1073-153i20.5,LOC103462478,LOC107386469,LOC103381127,LOC103395676,LOC102204254,LOC101485372 coding downstream 22769 38325543 ~ 38325990 (+)
LOC120557028 NA coding downstream 39669 38342443 ~ 38344251 (+)
LOC120557055 NA non-coding upstream 52775 38247303 ~ 38248320 (+)
LOC120557056 samd3,LOC101476819 non-coding upstream 72745 38227579 ~ 38228350 (+)
G44325 LOC104935308,LOC104932967 non-coding upstream 140401 38159937 ~ 38160694 (+)
G44265 NA non-coding upstream 351318 37949515 ~ 37949777 (+)
LOC120556894 NA non-coding upstream 468476 37764777 ~ 37832619 (+)
G44387 LOC104935308,LOC107719244,LOC104932967 non-coding downstream 28606 38331380 ~ 38332050 (+)
G44402 NA non-coding downstream 107228 38410002 ~ 38412477 (+)
G44401 NA non-coding downstream 110053 38412827 ~ 38413939 (+)
G44417 NA non-coding downstream 153148 38455922 ~ 38456336 (+)
G44419 NA non-coding downstream 153907 38456681 ~ 38457162 (+)
LOC120557027 NA other upstream 126601 38166182 ~ 38174494 (+)
plekha6 plekha6 other upstream 205023 37960706 ~ 38096072 (+)
fezf2 fezf2 other upstream 1589800 36703255 ~ 36711295 (+)
trnac-gca_18 NA other upstream 2338485 35962539 ~ 35962610 (+)
G43924 NA other upstream 2635054 35664143 ~ 35666041 (+)
G44436 NA other downstream 309863 38612637 ~ 38612971 (+)
LOC120557667 LOC102775714,LOC103375741 other downstream 597798 38900572 ~ 38903056 (+)
LOC120557670 NA other downstream 650344 38953118 ~ 38981733 (+)
LOC120557680 NA other downstream 1444399 39747173 ~ 39774250 (+)
G44581 NA other downstream 1511186 39813960 ~ 39821908 (+)

Expression


Co-expression Network