ctsz (ctsz)


Basic Information

Item Value
gene id ctsz
gene name ctsz
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 14452194 ~ 14455976 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797073.1
TGGTCATATGACTGAGGTCTCAGTACCGGTTTATCAGCGCTGTTTACCCGCAGACACGCGGCAGTTTTTCGGCTGTACCTGATAACGCCACCAGCCTCCTGAGCCTGCTCGGTGTGTTAAAGATGGCTGGGACAGTTTCAGTCGTCCTGTTTTCAGTCCTGCTCTCCGGTGTGAGCGCCGGAGTGTTTTTCAACCAGAAGCAGCCGTGCTATGTCCGCACACCGAGGAGAAACGACTTTGGACTGAAGACCGCTCCTCGTCCTCATGagtatttaaacatttctgaaCTGCCCAAATCATGGGACTGGAGGAACATCAATGGCACCAACTTTGTGAGCACGACCCGCAACCAGCACATTCCCCAGTACTGTGGCTCCTGCTGGGCCCATGGCAGCACCAGCGCCATGGCAGATCGTATCAACATTAAGAGGAACGGAGCGTGGCCATCTGCCTATCTCTCTGTCCAGAATGTGATCGACTGTGGCGATGCCGGCAGTTGCCATGGAGGAGATCACACTGGCGTTTGGGAGTACGCTAACAAACACGGGATCCCAGATGAGACGTGCAACAACTACCAGGCTAAAGACCAGAAGTGCAAACCCTTCAACGAATGCGGCACCTGCACCACCTTTGGAGTGTGCAATATTGTGAAGAACTACACCCTGTGGAAAGTGGACGATTACGGAGCTGTCAGCGGGAGGGAGAAGATGATGGCAGAGATCTACGCTAAAGGGCCGATCAGctGTGGGATTATGGCCACAGACAAGCTGGATGCCTACACCGGAGGTCTCTACTCTGAATATCAGGAGGATGCTTTCATCAACCACATCGTGTCAGTGGCAGGATGGGGAGTGGAGGACGGTGTTGAATACTGGATTGTACGCAACTCCTGGGGAGAGCCATGGGGTGAGAAGGGCTGGCTCAGGATCGTGACCAGTGCTTACAAGGGAGGAAGTGGAAGCAAATACAACCTGGCTTTGGAGGAGGACTGCATGTACGGAGACCCAGTTGTCCCCAAAGCCTACCTGTAGAGGAGACCAGCACCCACAGTGTCAGAGGTCGTCACTGTACGCCCACTTAGGTCTTCCTGTCTCGGGCAGAGGGaaactttttatttgtaaaatattGAAAAGGGAATAATTTCAGATTTTCTTAGATctattttttacacttttaatcACGGTGTCAAACTCTCAATGCCAATGTCTGGATATCAGACCTGCTTGAATCAATGCAGagtatctgatttttttttaatcacagtgAAAAGGCTGTTTTAACGGTCTGAAATGTATAAATTGAGTGGGAGGAGAGAAACACATCAGTACAACTACTTTCTACAAAATTCAAGCATTGCACGCTGAATAGCCACTATAAACACTGAAAAGATGCAACCAATTCTTCAGTTTACATTATCAAGAGGACATTGACAGCTTTCTTAGTTTTAGATTTCATGCATTTCCATGCAAACTGACTCAGCCAAAGAACACAGTGCTTATATGTCCTGAAATGCTCCGACactgaatgtttttattgtgtggTGTTAATGTACTGACAACATTAACTACACCCTGATAGAAAAACGGAAACTAAAATCTACTTTTAAAGTGTGCCTTACATGCACTGGCAGTCAATAGatttatgtaattttatttttgttttgttttttatgcttGGCAATGTACACATCAGAAATTCTGGAAAAATTGcaattttgttgttttaaactgtGCCAATAAACACACCACCTAAAAGTGAT

Function

symbol description
ctsz Predicted to enable cysteine-type endopeptidase activity. Acts upstream of or within angiogenesis. Predicted to be active in extracellular space and lysosome. Is expressed in blood; cardiovascular system; intestinal bulb; macrophage; and yolk syncytial layer. Orthologous to human CTSZ (cathepsin Z).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K08568 CTSZ; cathepsin X

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797073.1 True 1759 mRNA 0.46 6 14452194 14455976

Neighbor

gene id symbol gene type direction distance location
npepl1 npepl1 coding upstream 8389 14435641 ~ 14443805 (+)
ankrd52b ankrd52,LOC103359366 coding upstream 17172 14416436 ~ 14435022 (+)
si:ch211-159e12.5 NA coding upstream 106589 14339648 ~ 14345605 (+)
stx16 stx16,LOC102781320 coding upstream 118499 14324934 ~ 14333695 (+)
nab2 nab2 coding upstream 174764 14266964 ~ 14277430 (+)
si:ch1073-456m8.1 LOC102799563 coding downstream 118157 14574133 ~ 14583735 (+)
olfml3b olfml3 coding downstream 143047 14599023 ~ 14602910 (+)
pmela pmel,LOC103359383,LOC103375503 coding downstream 163541 14619517 ~ 14626326 (+)
prph prph,LOC103375502 coding downstream 175902 14631878 ~ 14637440 (+)
timeless timeless coding downstream 182422 14638398 ~ 14650434 (+)
G38276 NA non-coding upstream 143753 14305760 ~ 14308441 (+)
G38274 NA non-coding upstream 158037 14293933 ~ 14294157 (+)
G38247 NA non-coding upstream 256777 14193103 ~ 14195417 (+)
G38206 NA non-coding upstream 406635 14045357 ~ 14045559 (+)
G38164 NA non-coding upstream 449007 14002962 ~ 14003187 (+)
G38317 kdm5b,LOC108235655 non-coding downstream 8998 14464974 ~ 14466684 (+)
G38331 NA non-coding downstream 36927 14492903 ~ 14494740 (+)
G38441 cdk2 non-coding downstream 151863 14607839 ~ 14610422 (+)
G38449 NA non-coding downstream 186956 14642932 ~ 14690625 (+)
G38496 NA non-coding downstream 254750 14710726 ~ 14712134 (+)
LOC120557952 mettl21b other upstream 114434 14335160 ~ 14337760 (+)
LOC120557956 nrn1,LOC104931831,LOC102785075,LOC100692329,LOC102195708,LOC102307414 other upstream 218657 14227097 ~ 14233537 (+)
tfeb tfeb other upstream 923875 13456929 ~ 13528319 (+)
mdm4 mdm4 other upstream 1079822 13319684 ~ 13372372 (+)
per3 per3 other upstream 1122862 13305415 ~ 13329332 (+)
cdk4 LOC107684003,LOC107701179 other downstream 284633 14740609 ~ 14757359 (+)
znf740a LOC107385642,LOC101469799,LOC102214350,LOC102304359,LOC103376569,LOC107082105,LOC100709046 other downstream 309321 14765297 ~ 14857069 (+)
G38517 NA other downstream 352376 14808352 ~ 14816436 (+)
calcoco1b LOC104959845,LOC103376572 other downstream 409083 14865059 ~ 14874459 (+)
G38834 NA other downstream 1189535 15645511 ~ 15647851 (+)

Expression


Co-expression Network