rad54l2 (LOC103359734)


Basic Information

Item Value
gene id rad54l2
gene name LOC103359734
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 18158189 ~ 18172130 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797078.1
TGGAGCTACCTCTACGGGGACGGTGTTTATGGTAACACTGGAAAAATTAGAAATTAGCAACGTTTATCCGTTCATTTACACAGTACTGTGCGAATTAATTTATTGGTCATTGTATGCACagcgaggtttcttgaagagtACAGCGAAGCCGCATACACGagCTCCTGATGAAGGTCTGTAGGTAATAGTTTGAGAGCCTTGTAAGACGCCATGTCTGAAGAGGCAATTTCAGAAAGTGACCTGGAGCCCAGCCTTAACAGTGAAGAGGAGTATTCGGAAaacgaggaagaggaggacaaTGAGGACGTGGAGGAAGATGAGGATGAAAATGATGGAGACGATGAAGAAGATGATAGTGTTGAACGGCCTGTTAGTGCCCAGGGCAGGACAGAAACAGGTCAGGATGGCAGGGACTCCACTTCAGCTACCTCTGGAGAGCCGTCCTCAGAGCCTCCGTCTGAGCCCGCGTCCCGCCCGTCCTCCAGACCCCCTTCTCGCTCTCAGCCTCCAATCAGCCCGGAAAACTCAAGCCAGAGCAAGCCAGCTTCcagcaaaacaaagaaacataaAACCTCTAAATTAACCAAATCTTCTAAGtcttcaaaaggctccaagccATCTAAGCCTGCACACATGAGGAAGAATATCAGAAAGCTGCTGAAAGAGGATCAACTGGAGGCGGGGACCAAAGCTGCTCAACAGGAGGAGATGGACAGGCGGAAGCGTCTGGAGCAGCAGAGGAAGGACTTCCCTACACCAGCCTCGACTGTCCCAGACTCTCAGCTAGTCGACACTGCTTCAATTTTAGAAGTATCTCACTTGGTCCCTGCTCTCCTGAGCAAGCAGGATGTGATCTGTCTGGACAGCAGTGGGGATGAAGATGAAAAGGTGGACCCCACGCTGCCTTCACTTGCCATTAGAGACGATATAATTGAGCTTAGTTCTGGGGACGAGGACGCCCTGCAGATAAGCAGCGAGTCTGCCGATGAGGATGCTGATGGCACGGCCGCCTCAGAGGAAAGCAGTGGAGCGCACATCAACGACGCCATGAATCTGCCTGATGCCCAGGGTCGAGTGCTGGTTAATATCGGTCACCCTGCAGAGGAGAAAGACATTTACCTCGCTCCACAGCTGGCCAAGGCCGTCAAACCTCACCAGATCGGGGGAATCCGGTTCCTCTATGATAACCTCATTGAGTCTCTGGAGCGGTATAAGACCAGCAGTGGCTTTGGCTGCATCCTCGCTCACAGCATGGGGTTGGGCAAGACGCTGCAGGTCATTTCCTTCACTGACATCCTACTGAAGAATACTGAGGCTCACACTGTGCTGGCCATTGTTCCTGTGAACACACTTCAGAACTGGCTGACCGAGTTTAACCTCTGGCTCCCACCACAAGAATCCCTTTCCCCTGACACTGACCCTGCACTCGTCACCGGCCGCACATTCAAAGTTCACATTCTCAATGATGAGCACAAGACGACGCTGGCCAGGGCCAAAGTTGTGGAGCACTGGTCCAGAGATGGAGGGGTGTTGCTGATGGGCTATGAGATGTACCGCCTGCTGTCCATGAAGAAAAGCTTTGTGATGGGCAAGAAGAGGAAATCAAAGAAGCCCGCCGGACCAATCATCATTGACCTGGATGAAGAAGATAGACAGCAGGAACTCATGAAAGgtATTGAAAGGGCCATAGCGCGGCCTGGCCCAGATGTGGTGATATGTGACGAGGGTCATCGTATTAAAAACTACCATGCCAGCACATCACAGGCTCTGAAGAACATCCGCTCCCGGCGCAGAGTAGTCCTGACCGGTTACCCGTTGCAGAACAACCTTATTGAATACTGGTGCATGGTGGACTTTGTTAGGCCTGACTTTTTAGGCACACGTCAGGAGTTCAGCAACATGTTTGAGCGGCCCATTCTGAACGGGCAGTGCGTGGACAGCACACCTCAAGATGTCCGCTTGATGCGCTACCGCAGCCATGTGCTGCATAGCCTGCTGGAGGGGTTCGTCCAGAGACGAGGTCATGATGTGCTGCGAGACCATCTCCCCTCCAAGGAGGAGCATGTGATCTTGGTGCGACTCTCTCCCATTCAGAGGGCGCTGTATACCGAGTTCATGAAACGCTTTCGAGAAGCAGGGAACAGTGGCTGGCTGGGTCTAAACCCACTCAAAGCCTTCTGTGTCTGCTGCAAGATCTGGAATCACCCAGATGTCCTCTATGAAGCCCTGCAGAAGGAGAATCAGGCAAACGAGCAGGACCTGGACCTCGATGACATCACTTCAACTAGTAACCCCCGCTGCCCTGCACCAGGTTCTGGCCTCAAAGCCAAAGTGGCCGACTCGAGCAACAGCAAAGGCAACAACACCCTGCCACCACTCAATCACTCTCAGGAAAGAGCCAATCAAGTTATCACATATGAATGGGCAAAAGGCATAATGTCAAACTACAGCACAGGAGTTCTGGAGAACTCTGCCAAGATGATTCTGCTCTTTCATTTGATTGATGACAGTGTAGGAAGAAGAGACAAGATTTTGGTCTTTAGTCAAAGTTTGTCCACCCTGACGGTCATTGAGGACTTCTTATCGAAGAGAGCCATGCCGAAAGGCATCGCCTCCTCTGACGCCCAGAGCCAAAACTGGGTTCGCAACCTCAATTACTACAGACTGGATGGGAGTACTTCTGCCTCAGAAAGAGAGCGACTTATAAATCAGTTTAATGACCCAGAAAACAACACAACGTGGGTCTTTCTCCTTTCAACAAGAGCGGGCTGCTTGGGGGTAAATCTGATTGGGGCCAACCGTGTCGTTGTGTTTGATGCCTCCTGGAACCCATGTCACGATGCTCAGGCGGTGTGTAGGGTGTACCGCTATGGTCAGAGGAAACCCTGCTACATTTACCGCCTTGTCTGTGATTTCACATTGGAGAAGAAGATCTATGACAGACAAGTCTCCAAACAGGGCATGTCTGaCCGTGTGGTTGATGACCTGAACCCAGTATTGAACTTCACTCGTAAGGAAGTGGAGTCGCTGCTTCATTTTGTGGAAGAGGAACCTGATAAAATCTCTCTGGAATCCCAGGGGGAATTTGAAATAGTGATGTATACAGCTTGTCAGCTTTATCCACACCTCATCACCAAGCAACCTTTTCATCACGAGTCTCTGCTGGTGGACCGGAAGGAGTCGAAGCTGACCAAAGCAGAGAAGAGAGCCGCCAAGAAGAGCTATGAGGATGAGAAACGAGCCTCTGTGCCCTACTCTCGCCCATCATACGCCCCCTACTACCCAACCAGTGATCAGACGCTCACAAACATACCAGCATTTAACCAACGCGGCTGGCGTCCCATGGCACGACCAGATGACAAGCCTGTGGCAAGTGTCAGGCCCATCCAGTCAACCCCGATCCCCATGATGCCTCGCCAGGTCGGCATGGGCATGGCTGGCTCCAGCTCTGCCGGCAGCCTGCCTGTCAACTTCCTGCAGAAAGCTGGAGTTTATGTACAGAGGATCGTCACCACAACCGATATTGTAATCCCAGGAGCCAACAGCACAACAGATGTTCAAGCTCGAATTAGTGCAGGGGAGAGCATCCATGTTATCCGAGGATCAAAAGGTACCTACATCAGGACAAATGATGGAAGGATCTTTGCTATTCGTTCTGGAAAGATCAGTAGGCCGGCAGTCGGGGGCTCTGCTGCTGCAAGAGaCACCCAGGGTTCCCTGATCCACCCACTCAGTAATGGCTGTTCATCGCCTGTGGATCAACAGCAGGGCTCCCCCAACGGGGAGCAGCGGCCCTCCTCTCCCTTAAACTCTGAGATTCTCAGAGAGTTCAGCCGCTACGCTGCATCCACAAGTGATGCGGGCATGGGGAATGAATTGCCGTCACCGTCAGAAATGTTGGCTGTACCAGCAGGGGATGAAGGCAGTTCGCGAAACAATCAGACTGCTGACCTCAGTAGGCAACTCGGTGGAGACCTCTTGAGCTCAGCTTTAGAGATGCGAGGCAGCAAGCGCAGGAGTACTGAAAGCCATGGCAACACACAAATAGGAGGAAAACGCACTTCTGCTGCAACACGTTTCCCAGGACTGTCAATGGGCTCCAGTGGGCTCAGTTTTCCCCCTGTGGGTCTGAACACGACCTCCCTACTGGGGAACCTAGGTCACATAAGTCATCCCCTTCTGATGGATGGTGGTGGTGGATCGTCATTCCTTCAGACACCAGGACAAACACTGGCTGACCTACCGACCATGTTCCCCTCTGCAGGCTCGGACCTACTGAGACAGTCTGCCACAGGACACCTTCCCACCCCCTCCTCGTCCTCTCTGTCCACTGTTTTCTCCTCTGCTTCCACCACCATCCCCATGTCATCTACACCCTCGGCAGCAACTTCTTCCTCCCTGGCGTCGGGTTCCCTGCCTTCGTACTTGATGAATCCCAACATGGCTGGCCTGCTTTCGTCAGGCTTTCCTCTCAACTACAGTCCGTCGCTGCTTTCTGAGCCGAGGATGTTCcccacctctctcctctctggctCAGGGGGATTCCCCACGCCTAACTCCAGCTCTACTGCATCCAGTTTCCTCTCCCATTTCAACAATCCCACTTCCAGTCTGTTGGGGGCAGCTCTGACCCAGCCGGACCTACATCCAAGTACGGAGAACGGCGGCAGTAGTTCTGATGATGATGTAATAGAGGTGACGGGACAGTAGAGACTCAATAAGTCCTGGAGTTTCACACATAATTTGCATTAGGGACGGGAATGATTGCACATTTACTATCTCAACAAAATTGATTCTGTTACAGTACCTACCCTAACCTATGAATGGATAATTGAAGGCCAGATGCATTGTTATATTCTGATTGTGTGAGTGCATCAGAATGCACGGGagttaaagagaaaaaaagggaaattctACAATGATGAAGTGACtggtcttttttgtttttaaatcaattttaatCCTGAACACATACTGTGAAGTTGGAAAAGATTGTGATAAGTTAAATGTGTTTCGGCCTTGCTGTTAGACTAGCCATTAAAACAGTTTATATCATTCACATATTTACCAGTGAAATTGCAAGTTAACGGCATTCCCATTCCTAATGTTCTCATTaaactatatacacacacacacacacacacacacacacacacacacacacacagacacagactctCACCTGCAACTGAGAGAATCAACTATTACCTTAATGACTGTACACAGTCAGAGTAACAAATCGTTATGCTGAATATCTTCTACTTGTTCAGCTGGAGCATCAGAATAGTGGGAACAGACCATTATTGTTCGGGGACCAGCTGACATTTTTGTGGGCTTTTTAACCACAGCATCTCCTGCTACACTTTAACACAAGGCCTCACCGTGctgttagtttttgttttttttctctccatgaaCGCAGATGGCATAATGTGAGGAAAAACTGCTTCATGTTGGattgtctcatgatatattgctGTGAAACAGTCCGGTGCAAACCAAAATTTGACATTTCCGCAGTACTCACCTGCTGAAAACAAATTATACTAATTTTATTTCAGCACTGTTTCTAATAAACAATACTGGTAAGCTACATAGTACAATAAATAACTACAGAACGTTGTTAAAATCCACCGGACAATATATTTAGAGAAAATCCTTCGAGGCTTACCTTTAATAACTGAATCTTAGGCTTTCAGAGCGTATTTTAGTCTTTAGCAATTTGATAGGCATTGTAGCATCCCCTGTTGAATGGATATTATGTGTGATACTATAACTGAACATGTTGATACTTTGTAAATAGCAGTCATTATCATTGTTTATATTGCAAGTCAATACTGTGCAGTGTGTAGATTTTGGTTGTAGAAAGATGGTTTATTATTACAGTGACTATCATGATAAACACGCTTTTGCATTGATGCTGGGGAAACAAATGTACGTTCAACTTTATAATTTACCTCCCCCTCCCCCATAAAACTACAATGAATGTACTTTGTTAGCCTTTGATAAAACAGGGGCTGGGACATGGATTCGGACTGTGTTCTTTCATTTTTAGCCTTAAATAACACAAAGGGGTCTTGAGTCTTAGCATTTATCTTAGTACATCCCTTTTTACAAATCTGTTGGAACTACTGAGCATTTAGACAGTCAGTGTCAAACTCATTAACACAAGCATTGGGCTGATTCAGCAGTGATTAAAAGCACCAAGTCTGAAAGCTAAAAGGAGCACAAAGCTTTTAAGGTTTAATGTTGCTAAATCATCCACCTCTTTTGTTGCAGTTTTTACTTAAGTGTCCCCCACCATCAGTCAGCCTACACCCTACATGTAGTTTTGACTCTTAATTACTCGCTGAGAACAAATATTACCTAAACTGTAGAAAACATTGCATTCACGACGCCTGAGTGTTTCAAACCTGAAGTCAATGAAGCCACCAACCATCAAAACGGATATCGAACATGACTGTGGACCGGTGGTGGCCTTACCAAACTGACAGTGCCAACGTGGTAGCTTTTCACAGAGGTGCATCTTTAAAAGCTGTGCAGTGTAAGTAGCTTCTGTCAGTAGTGTCAGTCGGTGTAGGTCTGTGGTGCTTTAGGGAGTTTAGGCCTTTGCTGTTCTCTGTAGCCTTGTGTTTCCGTGTTGTGAGGACACCTCAAGGTATGTAGACTGTAACACTGGATAACCTGAGACAATTTTTATGGGTAGGTTTGTTTTCTTCTGAGGATCTTTTGCTCCCACAGTCAAGAGTACTGTGCACTTTTTGCTACTTACTGGCTCCTTCCCTTGTTGTTGTTCTGGATGCTATGTTTCTATCATCAAGGATGTCTCCAGTTTTCTTCAGCATGTCCGGGGAACTTGGGCTGGTTGGTTTCAGATTTGAAGGTGGAGCTGGCTCTTTGATAAAGGATCATATCTGCTTGTGAACTGAATTGTCTTTATTCTCAGTCCCTTGGAAACATTTTGCATTTGAATCTTGTGAATCATCAGTTTATAAAACAAAACCTGTCTGCCATTTCTTGTCGGTTATGTGCTTTTTTGTGTTTCATGCAAATgtcattttgtttatgttttttttacaacttcTTATTGGTGTTCACTGGCCTGGCAGTTGTTTCCCTTCTTTTAATGTAAGCGTCTGAAATGTATTTATGATGGAAATACATTCTTTTTTTGCAGTTAAattttttaaccttttgttCACTTTGACCCATTGACGGCTGATCCAGTAAGAGTTTCGTACATGCAGCCTAGATCGAAGCAAAATATGACTGTGTTATCAATGttattttaacaataaaacactTCTATTGCAGTGTGAA

Function

NR:

description
helicase ARIP4-like isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0005524 ATP binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0004386 helicase activity molecular_function

KEGG:

id description
K10876 RAD54L2; RAD54-like protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797078.1 True 7320 mRNA 0.47 22 18158189 18172130

Neighbor

gene id symbol gene type direction distance location
LOC120556657 LOC104967522,LOC103359687 coding upstream 145701 18007456 ~ 18012488 (+)
LOC120557500 NA coding upstream 150811 17999932 ~ 18007378 (+)
LOC120556720 NA coding upstream 159652 17982485 ~ 17998537 (+)
LOC120557499 LOC102289810 coding upstream 179587 17965362 ~ 17978602 (+)
LOC120557497 LOC102289810,LOC102203785,LOC102791845 coding upstream 196463 17951089 ~ 17961726 (+)
rassf1 LOC104967512 coding downstream 5613 18177743 ~ 18187751 (+)
hyal2b LOC103359756,LOC104967514 coding downstream 24015 18196145 ~ 18201292 (+)
abhd14a abhd14a coding downstream 34499 18206629 ~ 18211949 (+)
LOC120557727 LOC104967509,LOC102788387 coding downstream 59639 18231769 ~ 18286227 (+)
LOC120557883 LOC107385142,LOC107385141 coding downstream 159718 18331848 ~ 18344852 (+)
G39665 NA non-coding upstream 304823 17852516 ~ 17853366 (+)
G39654 NA non-coding upstream 372379 17785259 ~ 17785810 (+)
G39638 NA non-coding upstream 422283 17735486 ~ 17735906 (+)
G39633 NA non-coding upstream 435841 17715412 ~ 17722348 (+)
G39630 NA non-coding upstream 467613 17689804 ~ 17690576 (+)
G39861 NA non-coding downstream 276717 18448847 ~ 18452500 (+)
LOC120557393 NA non-coding downstream 372025 18544155 ~ 18547192 (+)
G39925 NA non-coding downstream 398461 18570591 ~ 18570983 (+)
G39926 NA non-coding downstream 401552 18573682 ~ 18573909 (+)
G39927 NA non-coding downstream 401852 18573982 ~ 18574211 (+)
wnk2 wnk2,LOC104946158 other upstream 228071 17904698 ~ 17930118 (+)
LOC120556838 NA other upstream 424178 17720441 ~ 17734011 (+)
G39581 LOC104949003,LOC103357913 other upstream 548973 17607930 ~ 17609216 (+)
LOC120557637 minos1,LOC103357934 other upstream 780629 17371483 ~ 17377560 (+)
srsf3b srsf3,LOC104948713,LOC103465186,LOC102226051,LOC103150674 other upstream 959972 17193151 ~ 17198217 (+)
tusc2b LOC104925135,LOC103359746,LOC102226579,LOC103137991 other downstream 17452 18189582 ~ 18194911 (+)
LOC120557740 acy1 other downstream 43576 18215706 ~ 18226578 (+)
oxtrl LOC104920519,LOC103360274,LOC100702815,LOC102207462,LOC102295060 other downstream 1124129 19296259 ~ 19314826 (+)
G40164 LOC103360294,LOC104965627,LOC100702547 other downstream 1152699 19324829 ~ 19326625 (+)
brk1 brk1,BRK1,LOC106565571 other downstream 1252736 19424866 ~ 19426456 (+)

Expression


Co-expression Network