atxn7l2a (atxn7l2,LOC103374593)


Basic Information

Item Value
gene id atxn7l2a
gene name atxn7l2,LOC103374593
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 36216085 ~ 36242866 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797092.1
GTAAGTTGCTTGCCGCGCAGTGATGATGGCGGTGCGTGAACGCGCAGTAAAAGTAATGGCTGCTCTGGATCGGCGGGTGCCTAGCCTCGATGATTTCGTGGGTCAAAACTGGACTGCCTGGGCCGAGTGGGCCGGTGTGACAGCGGCGGACGGGCCTGATGTGGACGACTGCAGCAAGTATGGCAAAAAGGCTGCAGAGGCCATGTCACTCAGTAAGGAGGACATGTCAATCTTTGGCCTCTACCCCGGCCATGATGACTTCTACCTGGTGGTGTGCAGCCACTGTGGCCAAGTAGTAAAGCCGCAGGCGTTCGAAAAGCACTGTGAGCGACGGCACGGCCCTCTGGCCAAGCTCTATGCCCGGCTGCGCTCTCCCACCCCTGCACCCCAGCCCCAGCAGAGGCCCCACCACAGCCATTCTCCTTCCCATGGGACCAATACTGCTTCTGCTTCATCCTGGGAAGGTCGAGGCCAGGGGGTCGGGCAACTACGGGCAGCCCCGCCTTCGCCTTCCACTCCACCCCAGTACAGACACTCCAAGAACTCCAAAGATGGAGTACGACATTCCCCACTGGAGAAGTCCTCCCACAGCAGCCACACAGAATCATCGGTATTCAAGCAGCCGCCACCTCTGGAGCCTCCAATCAGCTCTCCACCTCCGTCACTCAGAGATCCGCCCTGGCCACATGGAGGCACCCCGCCTGCTAGGCCTTCACACAGTGAAAGGTCCCCCACCCAGAGCCAGCGGAAGGACTCTCCTCTGGCCTCTGCATTGCCAGGCCACCGGATCCCCAGACCCTACAACAAAGTGGCCTCCAAGAGGGAATGTGACTTGGACAAACACTGCGGTGTCCTTGACCCTGACAGGAAGAAGGTCTGCACTCGCCTCCTGACATGCAATATCCACTCCATCCACCAGCGAAGAAAAGTGGTTGGCCGCAGTAAAAACTTTGACCAGCTAGTAGCAGAACTAAAGACCAAGGTTCGTGAGAAAGGGGCCCAATCCCTGGATGGAGGCTCCTCCAGTGGACGTTCCCCCAGCCCAGAGGCCCCCAGGGAGCAGGCTGGGGCTCCACACTGCAGGAGACCTCTGGCCAGCCTCCCTGCTTTCAGTCGGCCTACGGCGTCGGAGGGcaacacagaggaggagaagcagCGGCAGGATGAGGGAAGTTTCGGAGCCCCCTCCCCTCTCGTCCATGGACGGATCTCCAGTGATGAAAGTGAGGCAGAAGGGCCCGAGGAGCCCATTGAGTTCCCATCTTCAGCTGCACATCCCAGGCCACTAGCGGTATGTTCATTTGGCAGCCATGCATTGGGTCACGGCATCTACACGTTTGACAGGAGACTTCATCACCTGAGGTCGGCTCTCAGCAGCATGCTAGAGCAGCACATCAGCGCCCATCTTTGGAAGAAAATACCTCAAGCCACAGACCTTCAGTCTCCACCTTCGTCAGCAAAGACCATCACTTCCTCGTCTCCCTCCTCCATAGCTgccacttcctcctcctcgttaCATTCGAAGGTCCGCACAGGAAGTCATATCAGCTCCTCCCTCAAAACCGCATCCTCATCGTCCTCTTCCAGTCGTGGTCCAGGGAGACCCCCGGCAGCCATACAGTCGGAGAACTCGGGGGGCAGTGGGAGCAGCGCCGGTGGTGGCCGTCTGGTGTCTCCGGGGAAGCCTGCGGCGGTGTGTCAGCCGGGTCCCGGGCGAACCAAGAACCCTGTGGGGCGTCCCAGCAAGCAGATGCTGAAGCTGCGAGaggaggctgctgctgctgctgccctccGCAAACGCAAAGCCCCATCCCAGGAAGGGGAGCACTCAGGCCCCGACAGGAACTGCATCATTCTCCAGGACCGGGGCCGCCCGCCTTCTGctgcctcttcctcctcctcatcaacTTCTTCTAAAACCCCCATTCCCCTGCCGCTCCCACACGGACAGACCAATGGCACGCTTTCCCCCAGCAGCAAACCCCGCCCCCAACCCTCCCCCTCAGAGTCCCATTCACCAGCCGCCAAGGCGGTCTGGACCTACAAACGGACCCATACTCCTCTGGGCCATTCATCACCCCCAGACCCCTCCTCCGCCACCAACAACTCCCACAGCAGGAGCAGCGTGGGGGACTCAGGACTACACGGCCAGGGCAGCGGGAGGGGCTTTGAGCACCAGGGGCTTGTGAAGAAACGCAAGGGGGGCGGCATGGAGGAGCATTCGCTGTCCTCCAAACCCTCAGCGCACCGCctgccctcctcctcttccagctctgccacctcctcctcctccccgcgCTCGAACTTTTACCCCTGGAAGGACAGCAAGGGCGGGGGGCTGGCTGGGGGCGTGGAGAAGAAACTGGGCACACAAAAGCCAAAACTGCACCATTAAGTGTGCCTGCCTTACAAGCCACTAAGAGGGAGCCAGCTCTGCTCAGTCCAAGACTGAAGCAACAggactcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcggtaTGGATCTGTTGGTGTGTGAATCACAGCTGGATGTGTCAGTCTGTGGGAATGTCTGAGGGAGAACTGGGAGTGGGAAGGTGGGATGAAATTCAGAGTATGGATTTAGAAATACCTCAAGACCATCCGGTTACGCTGCTAAATTAAATATGTTGGTTTATAAAAATGGATTAAATATGTCCTTTACACTTGG

Function

symbol description
atxn7l2 Orthologous to human ATXN7L2 (ataxin 7 like 2).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797092.1 True 2727 mRNA 0.59 10 36216085 36242866

Neighbor

gene id symbol gene type direction distance location
sypl2a LOC103367888 coding upstream 5598 36182592 ~ 36210487 (+)
LOC120556919 NA coding upstream 696137 35517738 ~ 35519948 (+)
tp53rk tp53rk coding upstream 742759 35470994 ~ 35473326 (+)
LOC120557477 LOC103375199,LOC104930306,LOC101473264,LOC108251201 coding upstream 763766 35426361 ~ 35452319 (+)
LOC120558245 NA coding upstream 775946 35439977 ~ 35440139 (+)
LOC120557073 LOC103374592,LOC100706250,LOC102300861,LOC101476702,LOC102207203,LOC102780650 coding downstream 791 36243657 ~ 36249486 (+)
camk1ga LOC108240302,LOC103373651 coding downstream 59080 36301946 ~ 36327932 (+)
LOC120556721 NA coding downstream 123654 36366520 ~ 36368410 (+)
cadpsa LOC103364890 coding downstream 188539 36431405 ~ 36676255 (+)
fhit fhit,LOC106632879 coding downstream 1069196 37312062 ~ 37735317 (+)
G44044 NA non-coding upstream 5112 36210677 ~ 36210973 (+)
G44036 NA non-coding upstream 42519 36170653 ~ 36173566 (+)
G44032 NA non-coding upstream 58268 36157554 ~ 36157817 (+)
G44031 NA non-coding upstream 58597 36156811 ~ 36157488 (+)
G44028 NA non-coding upstream 63253 36152478 ~ 36152832 (+)
G44067 NA non-coding downstream 43171 36286037 ~ 36287296 (+)
G44092 NA non-coding downstream 134105 36376971 ~ 36379468 (+)
G44159 NA non-coding downstream 339661 36582527 ~ 36582888 (+)
G44153 NA non-coding downstream 435426 36678292 ~ 36679296 (+)
G44232 NA non-coding downstream 1059358 37302224 ~ 37302516 (+)
trnac-gca_18 NA other upstream 253475 35962539 ~ 35962610 (+)
G43924 NA other upstream 550044 35664143 ~ 35666041 (+)
LOC120556915 NA other upstream 729850 35463772 ~ 35486235 (+)
G43656 NA other upstream 1548903 34665236 ~ 34667182 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other upstream 2870279 33340284 ~ 33345806 (+)
fezf2 fezf2 other downstream 460389 36703255 ~ 36711295 (+)
plekha6 plekha6 other downstream 1717840 37960706 ~ 38096072 (+)
LOC120557027 NA other downstream 1923316 38166182 ~ 38174494 (+)
G44436 NA other downstream 2369771 38612637 ~ 38612971 (+)
LOC120557667 LOC102775714,LOC103375741 other downstream 2657706 38900572 ~ 38903056 (+)

Expression


Co-expression Network