LOC120557073 (LOC103374592,LOC100706250,LOC102300861,LOC101476702,LOC102207203,LOC102780650)


Basic Information

Item Value
gene id LOC120557073
gene name LOC103374592,LOC100706250,LOC102300861,LOC101476702,LOC102207203,LOC102780650
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 36243657 ~ 36249486 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797093.1
CTTCTCCCCTACTCTTCGGCGTTGAGATTCAAACCAGGAAGGGAAACGGCAGGCCATCCGCAGAGAGCGCTGGAAGCATACAGCAGTTGGTTTACCCTTACAATCTTCATGTTGCACCAGTTACAAGACCGCGAATCACACGGCGGGCTGACCTGCTGACACTGGTGTCAGACAATGTGGGAGGTTTAAATAATAGCCAGCTGACAGCCGCCGTCGTTGAGCCTGTCAGAtggtgtaacgttaacgttattcAACCGGAGGTGGGAAAGCACAGTTTCCACTGATGGCGATGTTTCTGCATTTAATACATTagccaacattttaaaattaaatgcaTAGTCGAGCAGCATTAGTCTCTGCATGATTACAGCGCCTCTTCTGTTTCTTCAAATCGGCGAAAACTAGCCACAACTACGATTGGTTAGTTGATTTATTTCCTTCGAAACAACCCTCGGAACGaattacactttactttaaacGCACTGGACAACGTGTAGACGTTAAGATTTCCCATGCAAATTAGAGGACTAGCTAGATACTTTACTGGACCACAGGAACTATACGTTACACAGCGAAGAGTACTTTTATTGGAAAAGTAAAACTTAATTTTAGTGTAGTATACCCGTTGCGCAATTGAATAATTcgcatttctaaaaaaaaaaataggccgGTGATGATTTACTTGGACGCGGACTGTGAAAAACTACCGGAAGTACTAGCTAAGTGCCATTGTGTGTAGCGTTAGCTTGACCATGGCCATCGGGCCACGGTAATCTGATCGCAGATCTCTATCCTGTCCGTCCGGTTCATCCACCTTCTTAACTCCGTGATCATGGAGCTCGCGCAGTGTTCCTACAGCAGACGCGCCACCCCGTCTCTCCGTTTCAGCTCACCGTCTACAGCCGCCGGAGCGGGCAGGTAGCCGGGCGGGGGGTCCAGCGGCATGCCGTCTGATGTGGAATACAGCCCGGTGGGAGAGGGGCTGGGGATGCGGGACTACTGGCTCTATGTGTGGCTCCGGAGGGCGGCGGTGATAGCGGCTCATGTCACCGGCCTGGGCCTGACCCTCATCATCACCCTGCTGTCCAGACCCGGAACCAGTCTGTTTTCTTGGCATCcagtgtgtatgtctgttgcATACTGCCTGTGTATGATGGAAGGCATCCTCCTCTTCTCGGCTGAAGGATCGCCCTGTTGCTTCAAATCCCGGAAGGGTAAAGTGCGTCTGCACTGGTTCTTTCAGGCTCTAGCCCTGATAGCGGCGGCCGCCGGGCTGGGCTTCATGGTGGCCAGCAAGAACGTGTCGGAGCTCCCCCACCTGCTCAGCTGGCACAGCGTGCTGGGCGTCTGCACCCTGGCCGCCACCGCGCTTCAGGCGGCGTGCGGCGTCTGCGTGATCTTCCCTCAGCTGCTGCGGCTGTCCTCTCCTCCGCTCAGGCTGAAGCTGTACCACGCCACCTGTGGCCTGGTGGTGTACCTGCTGGCCACAGTGACCGTGGTGTTGGCCATGTTCTCCGACTGGTTCCAGGCCACGGTGAAAGGGACAGCCTGGTGGGCCTTCCTCCTGCTGCCTCTCTTCCCCGCCCTGGTGGTGATGAACCAGATCACTAATTCCTACCTGCCCCGCAAGAAGATCACCAGATAGGAGGCACATAGCACGTAgtttatatccacgacgttccacttcagggattgctcCGTCAGAAAAtctgctggatgtccctcttttagGCCGGATACATgtcaccttcc
>XM_039797095.1
TTTATATTAACAGAGCACGAGCCTCCTCATTTAGCTTTTGTTGTAACAAGGGCTTTTATGATTaacgcagttttttttttgtcaagtcCATGTCTCCCTGCATCTTTTCATATTAGAAACTTGAAGACGTACTGCACTCATTGGCAGTGAGAAGAAACAGCTTCTGAAATAAATCCTCCCATTTGAGAGGCTGGGACCAGTGAATGATGCTATATCTAGAAGAGAAACAACTTCACCAATCAGTCTGTTTTCTTGGCATCcagtgtgtatgtctgttgcATACTGCCTGTGTATGATGGAAGGCATCCTCCTCTTCTCGGCTGAAGGATCGCCCTGTTGCTTCAAATCCCGGAAGGGTAAAGTGCGTCTGCACTGGTTCTTTCAGGCTCTAGCCCTGATAGCGGCGGCCGCCGGGCTGGGCTTCATGGTGGCCAGCAAGAACGTGTCGGAGCTCCCCCACCTGCTCAGCTGGCACAGCGTGCTGGGCGTCTGCACCCTGGCCGCCACCGCGCTTCAGGCGGCGTGCGGCGTCTGCGTGATCTTCCCTCAGCTGCTGCGGCTGTCCTCTCCTCCGCTCAGGCTGAAGCTGTACCACGCCACCTGTGGCCTGGTGGTGTACCTGCTGGCCACAGTGACCGTGGTGTTGGCCATGTTCTCCGACTGGTTCCAGGCCACGGTGAAAGGGACAGCCTGGTGGGCCTTCCTCCTGCTGCCTCTCTTCCCCGCCCTGGTGGTGATGAACCAGATCACTAATTCCTACCTGCCCCGCAAGAAGATCACCAGATAGGAGGCACATAGCACGTAgtttatatccacgacgttccacttcagggattgctcCGTCAGAAAAtctgctggatgtccctcttttagGCCGGATACATgtcaccttcc

Function

NR:

description
PREDICTED: cytochrome b561 domain-containing protein 1

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797093.1 True 1752 mRNA 0.53 3 36243657 36249486
XM_039797095.1 False 894 mRNA 0.54 3 36245061 36249486

Neighbor

gene id symbol gene type direction distance location
atxn7l2a atxn7l2,LOC103374593 coding upstream 791 36216085 ~ 36242866 (+)
sypl2a LOC103367888 coding upstream 33170 36182592 ~ 36210487 (+)
LOC120556919 NA coding upstream 723709 35517738 ~ 35519948 (+)
tp53rk tp53rk coding upstream 770331 35470994 ~ 35473326 (+)
LOC120557477 LOC103375199,LOC104930306,LOC101473264,LOC108251201 coding upstream 791338 35426361 ~ 35452319 (+)
camk1ga LOC108240302,LOC103373651 coding downstream 52460 36301946 ~ 36327932 (+)
LOC120556721 NA coding downstream 117034 36366520 ~ 36368410 (+)
cadpsa LOC103364890 coding downstream 181919 36431405 ~ 36676255 (+)
fhit fhit,LOC106632879 coding downstream 1062576 37312062 ~ 37735317 (+)
LOC120558220 NA coding downstream 1702154 37951640 ~ 37956976 (+)
G44044 NA non-coding upstream 32684 36210677 ~ 36210973 (+)
G44036 NA non-coding upstream 70091 36170653 ~ 36173566 (+)
G44032 NA non-coding upstream 85840 36157554 ~ 36157817 (+)
G44031 NA non-coding upstream 86169 36156811 ~ 36157488 (+)
G44028 NA non-coding upstream 90825 36152478 ~ 36152832 (+)
G44067 NA non-coding downstream 36551 36286037 ~ 36287296 (+)
G44092 NA non-coding downstream 127485 36376971 ~ 36379468 (+)
G44159 NA non-coding downstream 333041 36582527 ~ 36582888 (+)
G44153 NA non-coding downstream 428806 36678292 ~ 36679296 (+)
G44232 NA non-coding downstream 1052738 37302224 ~ 37302516 (+)
trnac-gca_18 NA other upstream 281047 35962539 ~ 35962610 (+)
G43924 NA other upstream 577616 35664143 ~ 35666041 (+)
LOC120556915 NA other upstream 757422 35463772 ~ 35486235 (+)
G43656 NA other upstream 1576475 34665236 ~ 34667182 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other upstream 2897851 33340284 ~ 33345806 (+)
fezf2 fezf2 other downstream 453769 36703255 ~ 36711295 (+)
plekha6 plekha6 other downstream 1711220 37960706 ~ 38096072 (+)
LOC120557027 NA other downstream 1916696 38166182 ~ 38174494 (+)
G44436 NA other downstream 2363151 38612637 ~ 38612971 (+)
LOC120557667 LOC102775714,LOC103375741 other downstream 2651086 38900572 ~ 38903056 (+)

Expression


Co-expression Network