zgc:171566 (ggh,LOC108243634,LOC102781709,LOC100692082,LOC107384984)


Basic Information

Item Value
gene id zgc:171566
gene name ggh,LOC108243634,LOC102781709,LOC100692082,LOC107384984
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 31377980 ~ 31417492 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797122.1
ATGGTTGTTGCCGTTCGAgGTGTGTTGGCACAGGAAAATCTTCCAGGAGACCAGTTTGCCCGTGGCTTCTCGTACATCGCTGCCTCCTATGTCAAATACCTGGAGGGAGCTGGGGCTAGGGTCGTACCCATAAGaATAAATCGCACGGAACAAGAATACACTAACATATTCTACTCAATAAATGGGTTGTTGCTGCCGGGAGGCGATGTAGATCTTCAAACATCGCAGTTCAGCCGAGCAGCCAAACTCTTCTACGACTTGGCACTGAAGGCCAATGATGCTGGGGACTACTTCCCCATCTGGGGAACATGTCAGggcttccagcagctgtccgTCCTCACAGCCAACAAAAACCTGCTAACCCTCACTGATACCAAGGCTGTGGCTCTACCTCTCACTCTCACACCAGCGGCCCAGTCCAGCCGTCTCTTCCGAAGTTTCCCCAAGGATCTTCTGCAGTCTCTGGCCGAGGAAAACGTCACTTCCAACTTCCACAGATGGAGTCTGTCTATGCAGAACTACAGCCGGAATGCCAAGCTCAAGAGGTTTTACAAGGTCCTGTCCACTAACAATGATGGGAAGAAAGAATTCATCTCCACAATGGAAGCCTACCGCTACCCATTGTATGCAGTGCAGTGGCATCCAGAGAAGAGCCCCTTTGAGTGGATAGATAAGCCAGGCATGATTCACTCCACCACTGCTGTAAGAGCCTGCTTCTACACTGCCAGCTTCTTTGTCTCTGAAGCCATGAAGAACCAGCACCATTTCtccagtgctgtggaggaagagcGAGCTCTCATCTATAACTTCTCTCCCGTCTACAGAGGCATGCATGCCATCTTCGTGCAGAACTATTACTTTGATTGATGGACAGTATACCGAAGACCAAACGGACCTGGGCTCAGTCTAGTCAGAATTTGTCATAAGTATCGTCATCTTGGCCCACGTTTAAAACCAAACTTTATGCTGTCGTCACTTACAGTAGCCTCAAACATCAAGTCAATAATTAGCCGTTTAGCTTAACTTATTTGCCACAGTGATTTGGAATGCAGTGCGAACAGGACAGTGAGGAAACGCAGTGATAATTAATACAAGAACAATTAAACGTCCTTTTTAGTAATCACTGGTTGTGTTGAGTCGAATGGCagataaagaaaataatacaaatttaatttatttcttttaatcagtgtttctcaaatgttttcagaacaAGGACCAAATATCCCCTATGCGCAAAAGTTGCTGGACTACACCATTTAGTTAACATAGCCATTCAATTAGCTTTGTATGAACTCATTTGGacatggcttgaatgtaacagatgtttATTCATGCAAAATAGTTgctcactatagctttaagtcatCGATCTTCAGTTGTCAGGAACCGTTAAACATTGTTCCTCCGTATTTCCTTCAGATGTCTTGCTGATCGTTCGTGGAGCAAAATTTGCTGAAATCcgacaacacagaaaaaaacaatttaaataataatgttaaaGTTTGCACATGAGttgatttactgtaatattgaAAATAACACATTAGGCTTAGACACATCCTTATTAGGCTTTGGAGTTGCTGGCagatttgagaaacactgtttttaatttttattttttattttttttatctgacaaATAATGGTTTCATACCATCTTCAATCCAAATCACCTTATAGTGtcatgatttgttttttaacatgGCTGTCGGCCCGACCCATTAAGGGACAGTAGTAACATTAAAGGGGCTATATTCTAAGCAGAGCTTCTTGGAATTAGTGCATTTTCACATTTGATCCGTTTCAGCCCTTCAAAAGAACTCAGACTTATTAGGCAGCATTTTTTGCGCATATGTGAACAATCCAAAGGAGTGCAGTTCTCATCATCTGTGCATTGTGAACACAACACACTTCAGGTTTGCTTTGCCCTTTTGCTTTTTTGCCAATGTATTTTAGCCCTGAGGCCCCATCAGAGCTGAAGTGGACCAGAAAGAGAACTGAGCCCTTTTTCAAGTAAATTGACAATGTGAACCCAAAAAGAACTGAGTCCCTTTTCTGTTGGTTCACTTTTTGGTTCACTTTAAGAGGACTgggggctagatttatcaagccgttagcgtttccaggcgctaattggtcgcaaagacggacgtaaccgatgcgggctatttacaaacagggcgcacttgggtaaaatcgcagcttgtctgccac

Function

symbol description
ggh Enables gamma-glutamyl-peptidase activity. Acts upstream of or within folic acid-containing compound metabolic process. Predicted to be located in extracellular space. Predicted to be active in vacuole. Orthologous to human GGH (gamma-glutamyl hydrolase).

NR:

description
gamma-glutamyl hydrolase-like

GO:

id name namespace
GO:0006541 glutamine metabolic process biological_process
GO:0008242 omega peptidase activity molecular_function

KEGG:

id description
K01307 GGH; gamma-glutamyl hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797122.1 True 2217 mRNA 0.43 9 31377980 31417492

Neighbor

gene id symbol gene type direction distance location
LOC120558103 slc6a6,LOC103364884 coding upstream 504474 30821681 ~ 30873506 (+)
lsm3 lsm3,LOC100705055 coding upstream 692445 30679316 ~ 30685535 (+)
abraa LOC103364886,LOC100691009,LOC101485260 coding upstream 864492 30504694 ~ 30513488 (+)
tomm34 tomm34,LOC102784590 coding upstream 934981 30429007 ~ 30442999 (+)
LOC120557913 NA coding upstream 970135 30389010 ~ 30407845 (+)
rspo4 LOC103374720,LOC103367962 coding downstream 963190 32380682 ~ 32444324 (+)
ripor3 LOC100693168,LOC104944097 coding downstream 1230107 32647599 ~ 32730753 (+)
psmf1 psmf1 coding downstream 1402478 32819970 ~ 32834491 (+)
cand2 LOC100694792,LOC102304752,LOC101484714,LOC108244949 coding downstream 1584611 33002103 ~ 33033297 (+)
LOC120557808 NA coding downstream 1929299 33346791 ~ 33348566 (+)
G42918 NA non-coding upstream 424930 30946372 ~ 30953050 (+)
G42899 NA non-coding upstream 484318 30892900 ~ 30893662 (+)
G42870 NA non-coding upstream 567916 30809829 ~ 30810064 (+)
G42836 NA non-coding upstream 700963 30673827 ~ 30677017 (+)
G42797 NA non-coding upstream 785385 30591943 ~ 30592595 (+)
G42953 NA non-coding downstream 934 31418426 ~ 31419591 (+)
G42956 NA non-coding downstream 11243 31428735 ~ 31428955 (+)
LOC120556847 NA non-coding downstream 20771 31438263 ~ 31442128 (+)
G42962 NA non-coding downstream 30517 31448009 ~ 31448390 (+)
LOC120556663 NA non-coding downstream 147956 31565448 ~ 31569609 (+)
ergic3 ergic3,LOC102788871 other upstream 1242146 30109535 ~ 30135834 (+)
G42449 NA other upstream 2135727 29240413 ~ 29242253 (+)
ephb2b LOC104917933,LOC103376520 other upstream 3554720 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 4613243 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 4829181 26542507 ~ 26548799 (+)
G43045 NA other downstream 1042640 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 1053303 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 1620442 33037934 ~ 33041311 (+)
G43277 NA other downstream 1770246 33187738 ~ 33212318 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other downstream 1844703 33262195 ~ 33336767 (+)

Expression


Co-expression Network