LOC120557116


Basic Information

Item Value
gene id LOC120557116
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 38941572 ~ 38942817 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797149.1
ATGGAGAGCTTTCCTGAAGAGTTTACACTAATCAAGTCAGGAAAGACCATCCCGACAAGCAGCAGATTGCTTACCCTTGCTCCCGAATACGATGAGTCTTCTGACCTGATCCGAGTTGGAGGAAGTGGAGAGGCCAACCAGTGGTCCCGAGAATGGCAGATTCGACCTGCCTTCTTTTCAACAGGGGTGGATTGCTTCGGCCCTATGCTCATCAAAATAGGCAGACGAACTGAAAAAAGATGTGGCATCCTGTACAAGTGTCTTACCACAAGGGCAGTCCACCTCGACTTGCTGGCGAATATGGACTCTAATTCCTTTCTAATGTCCCTCAGACGCTTCATAGCTCGTAGGGGAAAGCCCTTCAAGCTTTTATCCGATCAAGGCACCAACTTCAAAGGAGGAAGTAGGGAGCTGCATGAAGCATTCAATACCCTGGAGCCTGCCCTCAGAGATCTGCTAGCAGCAGAACAGATCCGCTTCCGCTTCAATCCACCCGGAGCTCCCCACTTTGGTGGGTCGTGGGAAAGAGAGGTGCGATCTGTGAAGACAGCCCTCCGAACCACACTAGGAGCTCAGACTGTGCCCGAGGAAGTGTTGATGACTGTCTTGATTGAGGTGGAGAGCATCCTCAACTCTAGGCCCCTGGGCTATGTCTCCACGGACATTGCAGACCCGGATCCTGTTACACCCAACTTCTTGTTGATGGGGCGGCCGGACTCCTCCCTGCCACAAGTCGTCTACCCAGAGACAGAACTGCTTAGTCGCAAAAGGTGGAGACATACTCAAGTCCTGGCTGATCATTTCTGGAGGCACTTCATACAGCATTTCTTGCCTACCTTGCAAGCACGACAGAAATGGAATATTGATGAAGAGGACATCACCATTGGGACGGTAGTTCTCATTGTAGATCAGCAGGCTCCAAGGGCTCTGTGGCAGGTAGGAACCGTGAAGACTGTCATACCTGGAGTAGACGGCCGTTGGACTGCGTTCAATAATTTAATTATACTAAACTCCTGCTTTCCCCCGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797149.1 True 1029 mRNA 0.51 2 38941572 38942817

Neighbor

gene id symbol gene type direction distance location
LOC120557676 NA coding upstream 28042 38897360 ~ 38913530 (+)
LOC120557663 NA coding upstream 55144 38857167 ~ 38886428 (+)
rbpjl rbpjl,LOC100707106 coding upstream 157514 38734167 ~ 38784058 (+)
LOC120557646 LOC103371188,LOC100695319,LOC106525027,LOC101482544 coding upstream 532298 38366059 ~ 38409274 (+)
LOC120557037 LOC105888650,LOC105896821,LOC103395674,LOC101068541,LOC105891059 coding upstream 594329 38346807 ~ 38347243 (+)
LOC120557678 NA coding downstream 2590 38945407 ~ 38947850 (+)
LOC120557683 NA coding downstream 179971 39122788 ~ 39142350 (+)
LOC120557665 NA coding downstream 306349 39249166 ~ 39276979 (+)
LOC120557118 NA coding downstream 351820 39294637 ~ 39313682 (+)
LOC120557124 NA coding downstream 848194 39791011 ~ 40446646 (+)
G44489 NA non-coding upstream 100339 38841034 ~ 38841233 (+)
G44488 NA non-coding upstream 116553 38824675 ~ 38825019 (+)
LOC120557691 NA non-coding upstream 128128 38806446 ~ 38813444 (+)
G44454 NA non-coding upstream 227749 38709982 ~ 38713823 (+)
G44451 NA non-coding upstream 258111 38683161 ~ 38683461 (+)
G44499 NA non-coding downstream 45251 38988068 ~ 38988533 (+)
LOC120557696 NA non-coding downstream 157168 39099985 ~ 39100496 (+)
LOC120557694 NA non-coding downstream 260852 39203669 ~ 39205218 (+)
G44527 NA non-coding downstream 556282 39499099 ~ 39865513 (+)
LOC120557693 NA non-coding downstream 665904 39608721 ~ 39610204 (+)
LOC120557667 LOC102775714,LOC103375741 other upstream 38516 38900572 ~ 38903056 (+)
G44436 NA other upstream 328601 38612637 ~ 38612971 (+)
LOC120557027 NA other upstream 767078 38166182 ~ 38174494 (+)
plekha6 plekha6 other upstream 845500 37960706 ~ 38096072 (+)
fezf2 fezf2 other upstream 2230277 36703255 ~ 36711295 (+)
LOC120557670 NA other downstream 10301 38953118 ~ 38981733 (+)
LOC120557680 NA other downstream 804356 39747173 ~ 39774250 (+)
G44581 NA other downstream 871143 39813960 ~ 39821908 (+)
LOC120557666 NA other downstream 1213391 40156208 ~ 40431341 (+)
G44690 NA other downstream 1537859 40480676 ~ 40506570 (+)

Expression


Co-expression Network