LOC120557118


Basic Information

Item Value
gene id LOC120557118
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 39294637 ~ 39313682 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797151.1
CTGAGCTGAGCTGAGGAGTGATTACATCTGTAATAAAACTGTGTGCTGTTATTAGTCAGAGCAACTCCATCTTTGTTCCTATAACCTGATTAAACAACAACTATGGAGCTACTTCTGGatctgctgtgtttgtgtcttctgTGTTTGACCGGGAAAAGACTTTGTGATGAAAACGAGCCAAAATATATCATAGTGAAAGAAGGGACAGATGTTGTGTTACCATGTTCTCTCAGCACCAAGGAGAACGTTGAGTCAAAAGTGTTTGACTGGAGGAAAGTTGCTCAGAAAGATGATGGTCTGAAGGAGGTGTTCATGTATGAAAAAGGCTTTCATTACAATAACGGTCGTCCAGGTCAGAGTGAGCAGTTCAAAGGTCGAGTCTCACATTTTGAAGATGAACTGAAACATGGCAACGCCTCCATAATCATCAGAAATACAAAGATATCTGACAGTGGAAACTACACCTGTGATTTTCCAAAACTTCAGCCACCTCAAAAATTCTACATTGAGATTGTTGTTGGTGCCGCTTTAAAACCATTTGTTACAATACTTGAGTGCAACAGCATGCTGGCGCTGCTGCAGTGTGAGAAGTTCATGGCAATCAAAACCTGA

Function

GO:

id name namespace
GO:0005201 extracellular matrix structural constituent molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797151.1 True 612 mRNA 0.41 4 39294637 39313682

Neighbor

gene id symbol gene type direction distance location
LOC120557665 NA coding upstream 17658 39249166 ~ 39276979 (+)
LOC120557683 NA coding upstream 152287 39122788 ~ 39142350 (+)
LOC120557678 NA coding upstream 346787 38945407 ~ 38947850 (+)
LOC120557116 NA coding upstream 351820 38941572 ~ 38942817 (+)
LOC120557676 NA coding upstream 381107 38897360 ~ 38913530 (+)
LOC120557124 NA coding downstream 477329 39791011 ~ 40446646 (+)
LOC120557127 NA coding downstream 1241268 40554950 ~ 40583705 (+)
LOC120557675 LOC107573218 coding downstream 1331506 40645188 ~ 40647514 (+)
LOC120557684 NA coding downstream 1371140 40684822 ~ 40716121 (+)
LOC120557681 NA coding downstream 1408014 40721696 ~ 40734477 (+)
LOC120557694 NA non-coding upstream 89419 39203669 ~ 39205218 (+)
LOC120557696 NA non-coding upstream 194141 39099985 ~ 39100496 (+)
G44499 NA non-coding upstream 306104 38988068 ~ 38988533 (+)
G44489 NA non-coding upstream 453404 38841034 ~ 38841233 (+)
G44488 NA non-coding upstream 469618 38824675 ~ 38825019 (+)
G44527 NA non-coding downstream 185417 39499099 ~ 39865513 (+)
LOC120557693 NA non-coding downstream 295039 39608721 ~ 39610204 (+)
LOC120557690 NA non-coding downstream 331073 39644755 ~ 39646601 (+)
LOC120557689 NA non-coding downstream 339596 39653278 ~ 39655738 (+)
LOC120557695 NA non-coding downstream 427305 39740987 ~ 39743350 (+)
LOC120557670 NA other upstream 312904 38953118 ~ 38981733 (+)
LOC120557667 LOC102775714,LOC103375741 other upstream 391581 38900572 ~ 38903056 (+)
G44436 NA other upstream 681666 38612637 ~ 38612971 (+)
LOC120557027 NA other upstream 1120143 38166182 ~ 38174494 (+)
plekha6 plekha6 other upstream 1198565 37960706 ~ 38096072 (+)
LOC120557680 NA other downstream 433491 39747173 ~ 39774250 (+)
G44581 NA other downstream 500278 39813960 ~ 39821908 (+)
LOC120557666 NA other downstream 842526 40156208 ~ 40431341 (+)
G44690 NA other downstream 1166994 40480676 ~ 40506570 (+)
LOC120557692 NA other downstream 1190512 40504194 ~ 40506056 (+)

Expression


Co-expression Network