LOC120557130


Basic Information

Item Value
gene id LOC120557130
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 41358141 ~ 41360354 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797163.1
TGACAACATGAAGGCTTCATCATCTGTGTCTCTGCTGCTCGGTGTGATGCTGTCTGGACTGACTGTGTCTGCAGTGTTTGTGGATGTCAGTCCAAACCGTCATCAGTTCCTCCGAGGGGAGAGTGTGTCTCTGAGGTGTGCAGGAGGACCGGTCTCTGCTGGATGGAGGCTGAAGAGGGCCGATGGTTGCAGGGGACAGACTCAGTCATGTGATGAAGATCTTCAGGACTTTGGGACGTTCGCTGGTTCCTCCTGCATCGTCTCCGATCTCTCTCCAGCTGCAGACGACAGAATCTACTGGTGTGAAGACAGAGCTGGGACGGAGAGCGGCCATGTCCAAATCCATGTGTCTGATCATGTGATCCTGGAGATCCCCACTCTCCCAGTGATGACAGGAGATGATGTCACGTTGCGCTGCAGGTCAAGATACGAAGTCCTGTCTATCCGGAGAGAGCGTGTGAttggagaaaagaagaaaatagatgATCTGCCGCCAGTGTTCACCATCAGCAGCGTCCAACCGTCTGATGAAGGCGTCTACAGGTGCAGTGCTCAGGACTATGACATGGTGATGATGTCCAGAGAGAGCAGGCTGACTGTCAGAGGTCAGGACAACTCAAACATCGTCATGAAAACGGTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797163.1 True 643 mRNA 0.53 4 41358141 41360354

Neighbor

gene id symbol gene type direction distance location
LOC120557311 NA coding upstream 368221 40961708 ~ 40989920 (+)
LOC120557310 NA coding upstream 443887 40872849 ~ 40914254 (+)
LOC120556655 NA coding upstream 537044 40807228 ~ 40821097 (+)
LOC120557677 NA coding upstream 560092 40738891 ~ 40798049 (+)
LOC120557681 NA coding upstream 623664 40721696 ~ 40734477 (+)
LOC120556884 NA coding downstream 2149 41362503 ~ 41365014 (+)
LOC120557132 NA coding downstream 46189 41406543 ~ 41412621 (+)
LOC120556749 NA coding downstream 264853 41625207 ~ 41628189 (+)
LOC120557138 NA coding downstream 378971 41739325 ~ 41743157 (+)
LOC120556746 LOC106676760 coding downstream 597939 41958293 ~ 41961170 (+)
G44758 NA non-coding upstream 52021 41305908 ~ 41306120 (+)
G44757 NA non-coding upstream 52360 41304778 ~ 41305781 (+)
G44751 NA non-coding upstream 281009 41045844 ~ 41077132 (+)
G44633 NA non-coding upstream 332799 40949921 ~ 41025342 (+)
G44711 NA non-coding upstream 420024 40713681 ~ 40938117 (+)
G45095 smpd4 non-coding downstream 20868 41381222 ~ 41387063 (+)
G45119 LOC106676758 non-coding downstream 126978 41487332 ~ 41501091 (+)
G45174 NA non-coding downstream 342280 41702634 ~ 41703077 (+)
G45193 NA non-coding downstream 495306 41855660 ~ 41858286 (+)
G45190 NA non-coding downstream 551810 41912164 ~ 41915303 (+)
LOC120557312 NA other upstream 426758 40848815 ~ 40931383 (+)
LOC120557687 NA other upstream 689399 40666199 ~ 40668742 (+)
LOC120557674 NA other upstream 810293 40519942 ~ 40547848 (+)
G44690 NA other upstream 851571 40480676 ~ 40506570 (+)
LOC120557139 LOC106956008,LOC103153866,LOC103464266,LOC108411580,LOC102236494 other downstream 390649 41751003 ~ 41768313 (+)
G45186 NA other downstream 509376 41869730 ~ 41880367 (+)
dynlrb1 dynlrb1,LOC106565026 other downstream 536641 41896995 ~ 41902631 (+)
map1lc3a map1lc3a,LOC107551126 other downstream 545175 41905529 ~ 41912117 (+)
G45237 NA other downstream 917931 42278285 ~ 42301895 (+)

Expression


Co-expression Network