LOC120557132


Basic Information

Item Value
gene id LOC120557132
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 41406543 ~ 41412621 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797165.1
TGAAGTCCAACAAAACACCGGCCTAGTTGGTGAGAGCCATGGAGAACGCAAAACGACGTCACCTTCGATCATGACAATCAGGAGGACAGGAGCGAGCGGGAGTCTTTAACAGATTGCCGGCCGGCCACCATGGATCGTCAAAGTAAAGGATCACAAAGAAACTCCATCCAAGAGGCAGCAAGGAATTTAATGTCTTTGCTGGGCAGCGAGCTAGAAGTAAACAGTCAGCAGCAGACACCACCTCAACAAAAGGCCCTTCAACAGCAGACTCAACCACCACAGTCGGTTCAACAGGAAATGGCCAGGTCATTTCCAGGCTTCTTTAATAGAGCCACTGCAAGGGGCAGAAAAAGATTCCACTCACCCTGTAGGGTGGCCAGCAGTAGTGCAAAGTCTGTAACCCTGCAGTTCTTTATGTTAAGTGAAAACACAGACAGGACACCAACAGCAACACATGAATTGAAACTACTCCTTGCTGGGATGGGGAGACGCACAATAACACTGCCCGAGTCTGCTGACCACTGTGAGATCTCAAGACTTCTGACCAGTCAGTACCCGAAACTGGCAAATATATCTGGAGGCTGGCTGTTGTATAAAGCCCTCGGTGGTTCGGGACAACGGAAACTTTCTGCTATCCCCCCAGAAGCAGAAGGTTACAATGGCCAGTTTTTAAAAAGTATGACTGGAGGAGGAAAGAACATAATCTACATTATTCCTCTCCAGGATGCAATAGATACGTCCCCTCTTCCTCTAGATGCACCTGAGTTTGAAAAGATGCCAAAGGCGGCTTGTAGAGTGTGTAGAAATAGCATGCCCTTGCAAGTATTGGCTGTGCATGTAAAGTCCTGTATGGACCAGCCATCATCAGGGGATGACTTTGAGTCTACCCCGGATGTGACAGTTGTTGCGGAAAATATTCCAGCGGAAGCTCCACCAGGGACTAGTAACTCCACAGCTGCCTGTCCAGTATGTCAGGTTGAATACCCTTTGGATTATCTCCAAATCCATGCCAGCTTATGCGGAGAGAGTCTGGAGGAAACGCCTGTGTCTAAATCAACTGAAGGTGTAGTTGAAAATCTTGATGATGTTATCCGGGCAATTGGGGATGCTGTAACCATGGATGACAAAACATTTGACATCATAGTGTCACGACAAAACATGTTGGAGAGGGGCCTTGTGCAGTGGCAGCGGCAAAAAAAAGCATCTCCTACTAACCAGCTTCAAGTTACCTTTTTAGGAGAAGCTGGTGTTGACACTGGGGCTCTCCGTAAAGAGTTTCTGACAGGGATGGTGGCGGGCATTGAAGAACGGTTCTTTGAGAAGGGCACACATGGCCGTAGACCTAAATACTCAATGTCTGATTTGGACAAAGGTCATTTCAGgtctGTTGGAGAAATAATGGCTGCCAGCTTGGCCCAAGGAGGACCAGCTCCAAATTTTATGATGCTCTGGTGCTACAAGTTCCTCTGCACTGGGTCCCTGGACTTGCACAAAAATGATGTGGGAGATGAGGAGTATAAGGATCTCTTATCAAGAGTAGATGAGGCCACAGAGATAACAATTGATGAACTCTCAGAGGAGATCCTCAATTGTGGGTACACAGGACTAATCACCTTAGGGAAAAAGGACGAAATAATACGattcttcaaagtagccactacTAAAGTAGTTCCTCGCACAGTAAACATATACCGAGCAATGTCGACGTTCTCCACTCCTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797165.1 True 1722 mRNA 0.47 13 41406543 41412621

Neighbor

gene id symbol gene type direction distance location
LOC120556884 NA coding upstream 41529 41362503 ~ 41365014 (+)
LOC120557130 NA coding upstream 46189 41358141 ~ 41360354 (+)
LOC120557311 NA coding upstream 416623 40961708 ~ 40989920 (+)
LOC120557310 NA coding upstream 492289 40872849 ~ 40914254 (+)
LOC120556655 NA coding upstream 585446 40807228 ~ 40821097 (+)
LOC120556749 NA coding downstream 212586 41625207 ~ 41628189 (+)
LOC120557138 NA coding downstream 326704 41739325 ~ 41743157 (+)
LOC120556746 LOC106676760 coding downstream 545672 41958293 ~ 41961170 (+)
LOC120556737 NA coding downstream 550743 41963364 ~ 41987577 (+)
LOC120556739 NA coding downstream 578786 41991407 ~ 41998401 (+)
G45095 smpd4 non-coding upstream 19480 41381222 ~ 41387063 (+)
G44758 NA non-coding upstream 100423 41305908 ~ 41306120 (+)
G44757 NA non-coding upstream 100762 41304778 ~ 41305781 (+)
G44751 NA non-coding upstream 329411 41045844 ~ 41077132 (+)
G44633 NA non-coding upstream 381201 40949921 ~ 41025342 (+)
G45119 LOC106676758 non-coding downstream 74711 41487332 ~ 41501091 (+)
G45174 NA non-coding downstream 290013 41702634 ~ 41703077 (+)
G45193 NA non-coding downstream 443039 41855660 ~ 41858286 (+)
G45190 NA non-coding downstream 499543 41912164 ~ 41915303 (+)
LOC120556755 NA non-coding downstream 526593 41939214 ~ 41957098 (+)
LOC120557312 NA other upstream 475160 40848815 ~ 40931383 (+)
LOC120557687 NA other upstream 737801 40666199 ~ 40668742 (+)
LOC120557674 NA other upstream 858695 40519942 ~ 40547848 (+)
G44690 NA other upstream 899973 40480676 ~ 40506570 (+)
LOC120557139 LOC106956008,LOC103153866,LOC103464266,LOC108411580,LOC102236494 other downstream 338382 41751003 ~ 41768313 (+)
G45186 NA other downstream 457109 41869730 ~ 41880367 (+)
dynlrb1 dynlrb1,LOC106565026 other downstream 484374 41896995 ~ 41902631 (+)
map1lc3a map1lc3a,LOC107551126 other downstream 492908 41905529 ~ 41912117 (+)
G45237 NA other downstream 865664 42278285 ~ 42301895 (+)

Expression


Co-expression Network