LOC120557138


Basic Information

Item Value
gene id LOC120557138
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 41739325 ~ 41743157 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797171.1
ATGGACCAGGATAGACAGCAAGGAATTGGAAGAGCTCGTGGACGAGGGATCCGTCAGAGAGGTGGGCATGGGGCCCATCAAAGGGTTGGTCATCGGCGAGGGGGAGGCAGAACTGTTGTCTCTAATGAAGTCCGGGCCATCGTCGTTGATCATGTGGTGAACCGAGGCCTTACTATGGCAGAAGCTGCCAGATTAGTTGAGCCAAATCTAAAAAGATCAACTGTCAATTCTATCATCCGAACCTTTCGCCAAGAAAACCGAATTAACAGAAAACCCCATAGTGGTGGTCGTGGCCGTGTCCTGACCGACCAGCAAGAGTTGGAAATGGTGAGGGCCAGGAATGATATACGGCTGTCAGAAATAAAGCAGGAAATTGAGGAGAACAATGACACCTTTGCCAATATGGCATCCATCAGCCTACCAACAGTAGCCCGCCTTTTAAAGCGGCACCAGGtatcaatgaaacacatttaccTGGTGCCTTTTGAGAGAAACAATGACCGGGTGAAACAACTAAGGGCTGAgtatgttcagAGGGTTATGGTGCTTGACGCTGATGTGAACCATCACAAGTACGTTTTTGTTGATGAAGCGGGCTTTAACCTTGCCAAAACTCGTCTCCGTGGACGTAACATTATCGGCCAACGGGCCACTGTCCAAGTGCCTGGACAACGTGGAGGAAACATTTCTATGTGCGCAGCTATCTCTGAAGATGGTGTCCTAGGACGTAGGCCATTACTTGGCTCCTATAATGCTGCACATCTTATTGAGTTTCTCAATGAAATTGAGCTGGCCTGTCAAGGTGAAGGGGTCACATATGTAATTGTGTGGGACAATGTCAGTTTTCACCACGCAGTGGTAGTTCAAGCATGGTTTCAGACCCATCCTCGATTCATGACCCTCTACCTGCCTCCATACTCTCCTTTCCTCAACCCTATTGAGGAATTTTTTTCagcatggaggtggaaggtcTATGATCGCCATCCCCTTGAGCGTGCCACCCTCCTTCAGGCCATGGATGACTCATGTGATGACATCAATGACCTGACTTATACTGCTGTGTAG

Function

GO: NA

KEGG:

id description
K07494 K07494; putative transposase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797171.1 True 1065 mRNA 0.49 4 41739325 41743157

Neighbor

gene id symbol gene type direction distance location
LOC120556749 NA coding upstream 111136 41625207 ~ 41628189 (+)
LOC120557132 NA coding upstream 326704 41406543 ~ 41412621 (+)
LOC120556884 NA coding upstream 374311 41362503 ~ 41365014 (+)
LOC120557130 NA coding upstream 378971 41358141 ~ 41360354 (+)
LOC120557311 NA coding upstream 749405 40961708 ~ 40989920 (+)
LOC120556746 LOC106676760 coding downstream 215136 41958293 ~ 41961170 (+)
LOC120556737 NA coding downstream 220207 41963364 ~ 41987577 (+)
LOC120556739 NA coding downstream 248250 41991407 ~ 41998401 (+)
LOC120556738 LOC106676760 coding downstream 265295 42008452 ~ 42012332 (+)
LOC120556744 NA coding downstream 269791 42012948 ~ 42014554 (+)
G45174 NA non-coding upstream 36248 41702634 ~ 41703077 (+)
G45119 LOC106676758 non-coding upstream 238234 41487332 ~ 41501091 (+)
G45095 smpd4 non-coding upstream 352262 41381222 ~ 41387063 (+)
G44758 NA non-coding upstream 433205 41305908 ~ 41306120 (+)
G44757 NA non-coding upstream 433544 41304778 ~ 41305781 (+)
G45193 NA non-coding downstream 112503 41855660 ~ 41858286 (+)
G45190 NA non-coding downstream 169007 41912164 ~ 41915303 (+)
LOC120556755 NA non-coding downstream 196057 41939214 ~ 41957098 (+)
G45229 NA non-coding downstream 424720 42167877 ~ 42170069 (+)
G45245 NA non-coding downstream 606097 42349254 ~ 42350755 (+)
LOC120557312 NA other upstream 807942 40848815 ~ 40931383 (+)
LOC120557687 NA other upstream 1070583 40666199 ~ 40668742 (+)
LOC120557674 NA other upstream 1191477 40519942 ~ 40547848 (+)
G44690 NA other upstream 1232755 40480676 ~ 40506570 (+)
LOC120557139 LOC106956008,LOC103153866,LOC103464266,LOC108411580,LOC102236494 other downstream 7846 41751003 ~ 41768313 (+)
G45186 NA other downstream 126573 41869730 ~ 41880367 (+)
dynlrb1 dynlrb1,LOC106565026 other downstream 153838 41896995 ~ 41902631 (+)
map1lc3a map1lc3a,LOC107551126 other downstream 162372 41905529 ~ 41912117 (+)
G45237 NA other downstream 535128 42278285 ~ 42301895 (+)

Expression


Co-expression Network