LOC120557146


Basic Information

Item Value
gene id LOC120557146
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 43412120 ~ 43442524 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797177.1
ctgacagtccAGCACTCCACACTCAATGTTATGACCATTTGGCTGCAGCATCTGGGTGTCGTGCAGCACTGGAGAATACGCAGGCCTTGAATGTCTCTCAGAGATGTACGGAGGATACCAACACTTTCCTCTGGGAATTGAACCAAGACGATCCAAAGGAATATGCTGTTCTCAtgtACGATGCATTTGGAAAGATGGGTAGCAATGTCAAAGGAGGTGATGTCAACCAGGCTGGCCTGCTGCAGGAGTGTCACTCTGCACACGGTCCCACCTTCTCTGGGCAGTACTGCCAGGTCTTCTTTAACAAgCCCCAGTACTTTGTGGGTATATGTGTTCCTGACTCCTGTGGAGAAGACGATGTGCAAATGCTGGTTGTTCACGGGAGACTTCAGTTTGGCCAGACATCCCTCATCCCTCCTTTCCCTCACATCCTAGTCAATCAATCCAGTCAGGAGATGATCATGACCCACTGTTTGTCCAACACCATTTCCCCTGATGCATCAGATGTTATCTGCCTgtttgtgtgtggtgtaatgGTAGCAGTACCTATTGCGGCTACCCTGTTGACCGCTATAATAAGGTGGCAACAGAACAGAGAAGTCAGTCGCACAGAGGAGTCTTCCTGTTTAAATACTGGCCTCAACCTTTTTGCAACCCTGAAGACCAATGGCTCTCACAGTCGCGATATTATTAGTAGCACTTCAGAGGAAAATAGTAAGTACAATGTGCATTATGTAAGGTAGATGATAAGTAAATGTTAAACACTGAAAAGTTTGTTGAATATTGTCTTTCCCTCCCTGAATGGCATCCGTGTTCTCAGCCTGTTATGGATCATGGGTGGACACACTGCAGATTTCAGCCAAATCAGCCTGGATAACTACAAAGACTGGAAGAAAACCGCTGAAAGAAGCCCACTGCATCTGTGCAGCGGGCCTATTTATCTGGCTGTGGACACCTTTTTAGTGCTAGGGGGTCTGCTTAGCGCGAGATCTGTGCTGGGTGCCATCGGCAGGGCTGAAGACAAACTGAGTCCCAGTTTGGTGGTAAACTACCTCTTCACAAGGATTAAAAGGATTCAACCACTGCATATGTTCATTGTGTGTCTAACCATTGGCCTCGTCTCGCTGGTCCAGTGGGGACCATACTGGTTCAAAGGCATAGATGCAATGATGGATTGTAAGACAAACTGGTGGACTAATTTACTGTTGATTAACAATTTCTTCCCAACCGAAGAGACATGTCTTCCTTGGACATGGTACCTGTCTCTGGACTTCCAGTTTTATGCCACCACTCCTTTGCTGGTCTATTTGTACAGACTACACAgaggtgtgtttgtgggtgttgcTGGAGGACTTCTGCTGATGACCACTGTGGCTGGTGCTGTTGTAACTGCACTCCTGCAGCTTTCAGTCTTTGTGCCAACTACAGTGCCACTTGAagattatgacttttattactaTCTTACACCGCACACAAGATATGGGCCGTTTTTAATCGGGGTCTTGACTGGAATATATTTTACAACAAAGAAAGATCAGCTGTTAAAGCAAAAGTGGCAGGCAGGACTTGGTTGTTTCTGCTGTCTGTCGCTCATGGCTGTTGTGGTTGGAGTGGCCAACATCCTCAGGGAGACCCCGgcCTATCCGTCTGTACCACACACCCTCTACCAGGGGCTGCACCGGTCCCTCTGGGCTCTGGCTGTGACCTGGATAATATTGGCCTGTGAGGAGGGTTATATGCATCGTTTTATCAAGAGCTTCTTGTCATTGGATTTATGGGTCCCTCTTTCCAATATCAGTTTCTGCAGCTATCTGATGCATCCTATCTTCTTCACCGTCTACATTGGCTTGCAAGAAACCCCAATCCACTACACAGATATCAACTTTATGTACCTGTTCCTTGGCACCCTGGTGCTCACACTGGTGGtcagctgtgtgtttactgtGCTGGTTGAGAAGCCATACAGCATCCTAAAAGTGATCGACACTTCATCGCCCTCGACACAAATCTCTCCATCTCCACTCGCCGTGCTCACACCCACAACGCCTTTCAAAGTCCAGGCTCCAAAAGAGAAGAGGCAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797177.1 True 2084 mRNA 0.48 18 43412120 43442524

Neighbor

gene id symbol gene type direction distance location
manf manf,LOC102787989 coding upstream 760789 42645340 ~ 42651331 (+)
LOC120557750 NA coding upstream 781184 42617221 ~ 42630936 (+)
LOC120557144 NA coding upstream 796538 42602515 ~ 42615582 (+)
LOC120557143 NA coding upstream 810827 42599087 ~ 42601293 (+)
LOC120557014 NA coding upstream 855682 42544075 ~ 42556438 (+)
LOC120558241 NA coding downstream 67822 43510346 ~ 43510459 (+)
nicn1 nicn1,LOC103371623 coding downstream 126085 43568609 ~ 43579005 (+)
LOC120558025 LOC102289652,LOC101467503,LOC103368898 coding downstream 453110 43895634 ~ 44107691 (+)
amigo3 NA coding downstream 773889 44216413 ~ 44220156 (+)
LOC120557212 NA coding downstream 907883 44350407 ~ 44352218 (+)
G45501 NA non-coding upstream 192678 43218942 ~ 43219442 (+)
G45441 NA non-coding upstream 292633 43041043 ~ 43119487 (+)
G45413 NA non-coding upstream 329520 42690427 ~ 43082600 (+)
G45435 NA non-coding upstream 415416 42958207 ~ 42996704 (+)
LOC120558209 NA non-coding upstream 514566 42896917 ~ 42897554 (+)
G45521 NA non-coding downstream 53892 43496416 ~ 43496659 (+)
G45528 NA non-coding downstream 102265 43544789 ~ 43545126 (+)
G45529 NA non-coding downstream 106596 43549120 ~ 43550279 (+)
G45538 NA non-coding downstream 170874 43613398 ~ 43613598 (+)
G45539 NA non-coding downstream 173326 43615850 ~ 43616092 (+)
rbm15b rbm15b,LOC102788268 other upstream 753732 42654788 ~ 42658388 (+)
G45237 NA other upstream 1110225 42278285 ~ 42301895 (+)
map1lc3a map1lc3a,LOC107551126 other upstream 1500003 41905529 ~ 41912117 (+)
dynlrb1 dynlrb1,LOC106565026 other upstream 1509489 41896995 ~ 41902631 (+)
G45186 NA other upstream 1531753 41869730 ~ 41880367 (+)
G45557 NA other downstream 395860 43838384 ~ 43838852 (+)
G45577 NA other downstream 514303 43956827 ~ 43957173 (+)
G45635 NA other downstream 918262 44360786 ~ 44468991 (+)
G45647 NA other downstream 961379 44403903 ~ 44407449 (+)
tsen2 tsen2,LOC102785813 other downstream 1046432 44488956 ~ 44499296 (+)

Expression


Co-expression Network