tmem183a (tmem183a,LOC102794008)


Basic Information

Item Value
gene id tmem183a
gene name tmem183a,LOC102794008
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 13446291 ~ 13456049 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797232.1
TCACGTCATTCCATGATGGCTGAAGATCCTGGCGGAACACTTTTCAATTTATCTcctatctttctttttttctctctacctCAGCTTGCCATAGAGACATGGCAGGACCAACAAGCCCGTTAAGCGTCCACAGATCATTGGTGTCGACATGCCCAAGAAAGGGAACCGAAAACGGCTGAAATTTAGGGCCGGGGACGTTTGTTCGGAATCAGTGACCGTTGCTGATTATGCTGATGCCGACCCAGCCGTTGTGAAGTCAGGGAGGGTGAAGAAGGCTGTTGCAAATGCAGTTGAAAAAGAAGTGAAATTACTCTGCGGCCTGGAAGCATCTCAGGGTGCTGTAGAGGAGGTCCTCTCATCTTCAGTGAGTGTCACAGCCGACGCTTTGGACAGCAGTGATGACCTAGACCCCGAAGAAGATGGAGAACATGAAACTAAAGCGTCCcgcaagaagaaaaacaagaggAGAAAGGAAAGCAGTGAGAGCGGGGATGGGGGGGAGTATCCAGTGGATATTTGGTTAATGCTTGCCTCCTACATTCGGCCCGAGGATGTGTGCAGATTTGCTCTAATCTGTAGGAATGCCTGGACGGTCACATGCACTGCAGCTTTTTGGACCAGGCTTTACAAAAGGCACTACAAGATTGATGCTGACCTGCCATTCCGTCTCCAGCCTGACTGTATTGACATGATGTGCGCTTTACGGGCCCGTGTGATTCGCTCCCTTTTCCATTTGTATGAGCCGTTCAGCTTGCGTGTCTCGAAAATTCCTGCCTTGCCAGAGTCCACGCCCACAACCTTGGTCAACTCCAAGTGTTTACTGTTCTGGGTCAGAAAGGTGTCAGGGACTCGGCCTGAGGCACTATGGGAGTTCAACTTCAAGTTTTTAAAGCAGCAGGGACACAGTAAGAATGGTTGTGCCAAGTCCTTGTGCATGCCCAGACAATACAAAGAAGTCCACACAAACCCAGACACTGACTGCTACATGCTTCAGGTCACCACCCTCAACTTCATCTTCACTCCTGTGGTCATGGGCATGACGCTGACCCTGTTCACAATCAACGTTAGTACTGACATGCGCCACCACCGCGTTCGTCTGGTCTTCCAGGACTCGCCGCTCCAGCGGTGGAAAAAGAGGGGAGATCAGGGTGGGACCCAGGTGGTGTTGGACCCCGTACACAGTGTAAAGCTCATGGACTGGTGGCACCCACAGTATCCATCTTCACCCTACACATAGGAGTCCTGCCCCCTCAGCAGAACGTCACACCAAGAACCCTGCTGTTATCCTGTACACTCACCAGAAATATGATATTGGATGACTCTGCAGAACCCTGTGTTGTGTTCATTCACATTTTGATTGTCATTGTTAGATTCTTAAGAAAGCAAACATTGACTGGCCTGAGATGGGATGCAAGCCCACCTTCCAGTGTCAGTATCAAATGTGTTGCATGCCCATCCACCACCGCAACCTCCACACCCTACTTAGAATGTTATTTGAACATCAAAGCTCTTCATGGATGTAAATCATGTAGTGCAGAATTGTCCACTATGAACCTTATTCATTATTCCAGAGAGACTGGGCTTGTTATCTATCTGCCATGTCCACATAGGGACATTGGCAGTTCCTCTACTCCTCAACTTCAGCAGTGTCTTAGGCCTAGTCCATATGTACGCAGGTATTTTTGTCCAACCAGGTTTTTCCCTCCTTTGTTCTAAAGCAAAATCCTGTCAACAcaagcattgtttaaaaaaataaaaaaatctccaTCCAAATGAAAACGCAAAAACACAGTTGAAGCGCTGTAAACAGCATGCCAAACCAACAGGTGGCCATGATATATCCCAAACCCTAAAGCCATGTTGGCAAATCAGAggcctgaagaaaaaaaaaagaaaagctattAAGATCGGTTTTCAGTGACCTTCAGTGCAGTTTGCGTGTGGACGAAagaccaaaatgtatttaaaaaagcaacatttaaaaataatatataataaaatacccGTGTACATGTGGACTAGGCCTTAGTCTTTCTGAAAACATGGAGAAGTGGGGCTGGGTAAAATGGGAAAGAAACCAGAAGATCATCATCTGAAATCAGTGATTGTTTTGATACCTGTTTATATGTGAAAAACAACAGCTTGTTTATTAGTTTCCCACTTTGAACAGCTGGGAGAAATCTAACTTCAAATAGTTTTCCATAGTTATCTCAGACAGGTGCATAATGTtttacaatataaaaaatactgtGATATGATCACAATAATAGTTAATAGATGATAAATATTGACTTATTGCTCAGCCCTACAGACATGCCAGAGAGAGGGTCTTGTACATTTTTAGAGCTACCGGTTGCATAAAAAGATTCACAAGTCTGCCATTGTTTTACGTTAGACAACATGTTTAACATGAATGTTGAACCTATGTGTGTAACACAATTTCTAGGAGTTTTTCTCATGGATTACCAGGTGGAACATTTGTACTGTCCTcccttggtttgtttttatgctTACTTGAAAAGTTGCTTAAATTTCTTGGTTTTGCATTGTTTTGAATGTTGACAATGTTACATCAAGAGTTGCATTCTTTtagaatcatgtttttttttcttgatgtaTTTAATTCAAGGCAGCATCACTTAGTATTGTGTCAATATTAATGACTTTTGACTTTTTACTGAAGGGTCAAAGAGATGATTTACCTCGGACCTCATCCACTCATTTggggaattattatttttttttttcttctttctagtGTGTCTTggttaaaaacatcttgattggCACCTTGCTGACTGTGAGCCATGTACCCTACTGCCTCCTGTGGAATCTGATTCTCAACTTTGAATGGCTCGAAGTGATTTAAAGTGGTCTGTCTAATGCGTGTTGAATGTGTGTTGAATCATACTAATCACATACTTGATTATGATGGGGAGAGAGTTACCATTGGCATTGATTTATCCATCTGTCAGACACTCAAAATTATTTTACCTGGATTGAATTGCATATATATCAAGATATTGTCAATGAAAAATATAGATTAACAACAAACCGTTTACAATTATAGAAATAAAGACAGGTGGATGTTCTGGTCGTTTGTCTAGTTTTGTCAGATGAGTTACATTGAAAAAACAACTTCactgaaataaaaactaaaactgcCCATTCAAAA
>XM_039797233.1
TCACGTCATTCCATGATGGCTGAAGATCCTGGCGGAACACTTTTCAATTTATCTcctatctttctttttttctctctacctCAGCTTGCCATAGAGACATGGCAGGACCAACAAGCCCGTTAAGCGTCCACAGATCATTGGTGTCGACATGCCCAAGAAAGGGAACCGAAAACGGCTGAAATTTAGGGCCGGGGACGTTTGTTCGGAATCAGTGACCGTTGCTGATTATGCTGATGCCGACCCAGCCGTTGTGAAGTCAGGGAGGGTGAAGAAGGCTGTTGCAAATGCAGTTGAAAAAGAAGTGAAATTACTCTGCGGCCTGGAAGCATCTCAGGGTGCTGTAGAGGAGGTCCTCTCATCTTCAGTGAGTGTCACAGCCGACGCTTTGGACAGCAGTGATGACCTAGACCCCGAAGAAGATGGAGAACATGAAACTAAAGCGTCCcgcaagaagaaaaacaagaggAGAAAGGAAAGCAGTGAGAGCGGGGATGGGGGGGAGTATCCAGTGGATATTTGGTTAATGCTTGCCTCCTACATTCGGCCCGAGGATGTGTGCAGATTTGCTCTAATCTGTAGGAATGCCTGGACGGTCACATGCACTGCAGCTTTTTGGACCAGGCTTTACAAAAGGCACTACAAGATTGATGCTGACCTGCCATTCCGTCTCCAGCCTGACTGTATTGACATGATGTGCGCTTTACGGGCCCGTGTGATTCGCTCCCTTTTCCATTTGTATGAGCCGTTCAGCTTGCGTGTCTCGAAAATTCCTGCCTTGCCAGAGTCCACGCCCACAACCTTGGTCAACTCCAAGTGTTTACTGTTCTGGGTCAGAAAGGTGTCAGGGACTCGGCCTGAGGCACTATGGGAGTTCAACTTCAAGTTTTTAAAGCAGGGACACAGTAAGAATGGTTGTGCCAAGTCCTTGTGCATGCCCAGACAATACAAAGAAGTCCACACAAACCCAGACACTGACTGCTACATGCTTCAGGTCACCACCCTCAACTTCATCTTCACTCCTGTGGTCATGGGCATGACGCTGACCCTGTTCACAATCAACGTTAGTACTGACATGCGCCACCACCGCGTTCGTCTGGTCTTCCAGGACTCGCCGCTCCAGCGGTGGAAAAAGAGGGGAGATCAGGGTGGGACCCAGGTGGTGTTGGACCCCGTACACAGTGTAAAGCTCATGGACTGGTGGCACCCACAGTATCCATCTTCACCCTACACATAGGAGTCCTGCCCCCTCAGCAGAACGTCACACCAAGAACCCTGCTGTTATCCTGTACACTCACCAGAAATATGATATTGGATGACTCTGCAGAACCCTGTGTTGTGTTCATTCACATTTTGATTGTCATTGTTAGATTCTTAAGAAAGCAAACATTGACTGGCCTGAGATGGGATGCAAGCCCACCTTCCAGTGTCAGTATCAAATGTGTTGCATGCCCATCCACCACCGCAACCTCCACACCCTACTTAGAATGTTATTTGAACATCAAAGCTCTTCATGGATGTAAATCATGTAGTGCAGAATTGTCCACTATGAACCTTATTCATTATTCCAGAGAGACTGGGCTTGTTATCTATCTGCCATGTCCACATAGGGACATTGGCAGTTCCTCTACTCCTCAACTTCAGCAGTGTCTTAGGCCTAGTCCATATGTACGCAGGTATTTTTGTCCAACCAGGTTTTTCCCTCCTTTGTTCTAAAGCAAAATCCTGTCAACAcaagcattgtttaaaaaaataaaaaaatctccaTCCAAATGAAAACGCAAAAACACAGTTGAAGCGCTGTAAACAGCATGCCAAACCAACAGGTGGCCATGATATATCCCAAACCCTAAAGCCATGTTGGCAAATCAGAggcctgaagaaaaaaaaaagaaaagctattAAGATCGGTTTTCAGTGACCTTCAGTGCAGTTTGCGTGTGGACGAAagaccaaaatgtatttaaaaaagcaacatttaaaaataatatataataaaatacccGTGTACATGTGGACTAGGCCTTAGTCTTTCTGAAAACATGGAGAAGTGGGGCTGGGTAAAATGGGAAAGAAACCAGAAGATCATCATCTGAAATCAGTGATTGTTTTGATACCTGTTTATATGTGAAAAACAACAGCTTGTTTATTAGTTTCCCACTTTGAACAGCTGGGAGAAATCTAACTTCAAATAGTTTTCCATAGTTATCTCAGACAGGTGCATAATGTtttacaatataaaaaatactgtGATATGATCACAATAATAGTTAATAGATGATAAATATTGACTTATTGCTCAGCCCTACAGACATGCCAGAGAGAGGGTCTTGTACATTTTTAGAGCTACCGGTTGCATAAAAAGATTCACAAGTCTGCCATTGTTTTACGTTAGACAACATGTTTAACATGAATGTTGAACCTATGTGTGTAACACAATTTCTAGGAGTTTTTCTCATGGATTACCAGGTGGAACATTTGTACTGTCCTcccttggtttgtttttatgctTACTTGAAAAGTTGCTTAAATTTCTTGGTTTTGCATTGTTTTGAATGTTGACAATGTTACATCAAGAGTTGCATTCTTTtagaatcatgtttttttttcttgatgtaTTTAATTCAAGGCAGCATCACTTAGTATTGTGTCAATATTAATGACTTTTGACTTTTTACTGAAGGGTCAAAGAGATGATTTACCTCGGACCTCATCCACTCATTTggggaattattatttttttttttcttctttctagtGTGTCTTggttaaaaacatcttgattggCACCTTGCTGACTGTGAGCCATGTACCCTACTGCCTCCTGTGGAATCTGATTCTCAACTTTGAATGGCTCGAAGTGATTTAAAGTGGTCTGTCTAATGCGTGTTGAATGTGTGTTGAATCATACTAATCACATACTTGATTATGATGGGGAGAGAGTTACCATTGGCATTGATTTATCCATCTGTCAGACACTCAAAATTATTTTACCTGGATTGAATTGCATATATATCAAGATATTGTCAATGAAAAATATAGATTAACAACAAACCGTTTACAATTATAGAAATAAAGACAGGTGGATGTTCTGGTCGTTTGTCTAGTTTTGTCAGATGAGTTACATTGAAAAAACAACTTCactgaaataaaaactaaaactgcCCATTCAAAA

Function

symbol description
tmem183a Predicted to be involved in regulation of protein stability. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of SCF ubiquitin ligase complex. Orthologous to human TMEM183A (transmembrane protein 183A).

NR:

description
transmembrane protein 183A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797232.1 True 3175 mRNA 0.42 8 13446291 13456049
XM_039797233.1 False 3172 mRNA 0.42 8 13446291 13456049

Neighbor

gene id symbol gene type direction distance location
myog myog coding upstream 63649 13380120 ~ 13382642 (+)
LOC120557160 sort1 coding upstream 81951 13353068 ~ 13364340 (+)
psma5 psma5 coding upstream 99249 13341900 ~ 13347042 (+)
trnar-acg_15 NA coding upstream 159980 13286239 ~ 13286311 (+)
camk1b NA coding upstream 181951 13219343 ~ 13264340 (+)
srgap2 srgap2 coding downstream 401712 13857761 ~ 13919015 (+)
ikbke ikbke coding downstream 464464 13920513 ~ 13941299 (+)
LOC120557194 NA coding downstream 487709 13943758 ~ 13955896 (+)
LOC120557195 rassf5,LOC104925239 coding downstream 508250 13964299 ~ 13976366 (+)
dyrk3 dyrk3 coding downstream 522687 13978736 ~ 13988512 (+)
G38001 NA non-coding upstream 329719 13115654 ~ 13116572 (+)
LOC120556864 NA non-coding upstream 366404 13075419 ~ 13079887 (+)
G37980 NA non-coding upstream 373466 13071974 ~ 13072825 (+)
G37978 NA non-coding upstream 374421 13070171 ~ 13071870 (+)
G37970 NA non-coding upstream 381925 13063334 ~ 13064366 (+)
LOC120556887 NA non-coding downstream 319732 13775781 ~ 13777150 (+)
G38156 NA non-coding downstream 455280 13911329 ~ 13989841 (+)
G38163 NA non-coding downstream 535860 13991909 ~ 13992179 (+)
G38164 NA non-coding downstream 546913 14002962 ~ 14003187 (+)
G38206 NA non-coding downstream 589308 14045357 ~ 14045559 (+)
mdm4 mdm4 other upstream 73919 13319684 ~ 13372372 (+)
per3 per3 other upstream 116959 13305415 ~ 13329332 (+)
vamp3 vamp3 other upstream 142676 13296376 ~ 13303615 (+)
spcs1 spcs1 other upstream 238033 13205469 ~ 13208258 (+)
kif21b kif21b other upstream 538356 12825516 ~ 12907935 (+)
tfeb tfeb other downstream 880 13456929 ~ 13528319 (+)
LOC120557956 nrn1,LOC104931831,LOC102785075,LOC100692329,LOC102195708,LOC102307414 other downstream 771048 14227097 ~ 14233537 (+)
LOC120557952 mettl21b other downstream 879111 14335160 ~ 14337760 (+)
cdk4 LOC107684003,LOC107701179 other downstream 1284560 14740609 ~ 14757359 (+)
znf740a LOC107385642,LOC101469799,LOC102214350,LOC102304359,LOC103376569,LOC107082105,LOC100709046 other downstream 1309248 14765297 ~ 14857069 (+)

Expression


Co-expression Network